RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 RTP1P59025 263 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 EIF3EP60228 445 aaKnown RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 MAP3K10Q02779 954 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 ZNF33AQ06730 810 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 ODF1Q14990 250 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 UAP1L1Q3KQV9 507 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 PMF1Q6P1K2 205 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 PKP4Q99569 1192 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 SMYD3Q9H7B4 428 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 AGO4Q9HCK5 861 aaKnown RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 SALL4Q9UJQ4 1053 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 EIF3LQ9Y262 564 aaKnown RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 A0A1W2PPH5 198 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 PGPEP1LA6NFU8 196 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 AQP9O43315 295 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 SCO2O43819 266 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 ITGB8P26012 769 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 SERPINF1P36955 418 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 CCR9P51686 369 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 SKP1P63208 163 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 CDK16Q00536 496 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 TEAD4Q15561 434 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 TGFBIQ15582 683 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 TIGD7Q6NT04 549 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 POLNQ7Z5Q5 900 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 CROCCP2Q86T23 111 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 ENDOVQ8N8Q3 282 aaKnown RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 FBXO22Q8NEZ5 403 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 CENPIQ92674 756 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 KIAA1143Q96AT1 154 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 OR10A4Q9H209 315 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 C11orf49Q9H6J7 331 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 THUMPD1Q9NXG2 353 aaKnown RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 MLXQ9UH92 298 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 SLC13A4Q9UKG4 626 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 ACSL5Q9ULC5 683 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 AP4E1Q9UPM8 1137 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 GPSM3Q9Y4H4 160 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 B4E171 279 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 HAUS5O94927 633 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 DLGAP3O95886 979 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 PTX3P26022 381 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 HMGCLP35914 325 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 NAMPTP43490 491 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 HTRA4P83105 476 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 SQSTM1Q13501 440 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 PLCL1Q15111 1095 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 GALNT18Q6P9A2 607 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 XKRXQ6PP77 449 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 FAM131BQ86XD5 332 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 CCDC71Q8IV32 467 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 SLC41A1Q8IVJ1 513 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 ADGRG5Q8IZF4 528 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 C9orf72Q96LT7 481 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 CITED2Q99967 270 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 OSBPL7Q9BZF2 842 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 PABPC3Q9H361 631 aaKnown RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 TAF1DQ9H5J8 278 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 ING3Q9NXR8 418 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 PKD2L1Q9P0L9 805 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 RAB23Q9ULC3 237 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 PLXNC1O60486 1568 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 STK36Q9NRP7 1315 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 SCN4AP35499 1836 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 CENPXA8MT69 81 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 CYTIPO60759 359 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 CUTAO60888 179 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 TGM6O95932 706 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 SERPINB2P05120 415 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 PGK2P07205 417 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 FGFR4P22455 802 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 CCR1P32246 355 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 MAGEA6P43360 314 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 TPTEP56180 551 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 STAT4Q14765 748 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 TWISTNBQ3B726 338 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 TRMT2AQ8IZ69 625 aaKnown RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 SPATA6LQ8N4H0 392 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 ZNF781Q8N8C0 355 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 AKR7LQ8NHP1 331 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 FAM136AQ96C01 138 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 FBXL18Q96ME1 805 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 DPYSL5Q9BPU6 564 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 METTL22Q9BUU2 404 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 METTL9Q9H1A3 318 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 TP63Q9H3D4 680 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-209ENST00000639244 CBX8Q9HC52 389 aa4.36□□□□□ -1.71
SCN3A-209ENST00000639244 M0QZ92 97 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 SGCEO43556 437 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 DTNBO60941 627 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 TNFRSF21O75509 655 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 GNAI2P04899 355 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 AKT1P31749 480 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 PIK3CBP42338 1070 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 OR3A3P47888 321 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 USP14P54578 494 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 ATP13A5Q4VNC0 1218 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 COL13A1Q5TAT6 717 aaPredicted RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 FOXB2Q5VYV0 432 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 KRT39Q6A163 491 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms