RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 STK40Q8N2I9 435 aa19.73■□□□□ 0.75
HLA-A-209ENST00000638375 PGBD5Q8N414 524 aa19.73■□□□□ 0.75
HLA-A-209ENST00000638375 TSEN2Q8NCE0 465 aaKnown RBP19.73■□□□□ 0.75
HLA-A-209ENST00000638375 CHST14Q8NCH0 376 aa19.73■□□□□ 0.75
HLA-A-209ENST00000638375 ACTRT1Q8TDG2 376 aa19.73■□□□□ 0.75
HLA-A-209ENST00000638375 NSMCE1Q8WV22 266 aa19.73■□□□□ 0.75
HLA-A-209ENST00000638375 EXOC2Q96KP1 924 aa19.73■□□□□ 0.75
HLA-A-209ENST00000638375 PSKH2Q96QS6 385 aa19.73■□□□□ 0.75
HLA-A-209ENST00000638375 HHIPQ96QV1 700 aa19.73■□□□□ 0.75
HLA-A-209ENST00000638375 CINPQ9BW66 212 aaPredicted RBP19.73■□□□□ 0.75
HLA-A-209ENST00000638375 SEPT3Q9UH03 358 aa19.73■□□□□ 0.75
HLA-A-209ENST00000638375 SHROOM3Q8TF72 1996 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 TCRBV21S2A2A0A5A6 115 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 K7ESF4 209 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 PGRMC1O00264 195 aaKnown RBP19.72■□□□□ 0.75
HLA-A-209ENST00000638375 CCNB1P14635 433 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 RBL1P28749 1068 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 MMP13P45452 471 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 ZNF235Q14590 738 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 CARD16Q5EG05 197 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 DPY19L3Q6ZPD9 716 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 CDKL3Q8IVW4 592 aaPredicted RBP19.72■□□□□ 0.75
HLA-A-209ENST00000638375 C1orf210Q8IVY1 113 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 PLPP6Q8IY26 295 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 KMT2EQ8IZD2 1858 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 TSTD1Q8NFU3 115 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 OR2AP1Q8NGE2 309 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 OR2T3Q8NH03 318 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 MAIP1Q8WWC4 291 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 C1orf54Q8WWF1 131 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 VOPP1Q96AW1 172 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 FAM129BQ96TA1 746 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 IL12RB2Q99665 862 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 CEP41Q9BYV8 373 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 MKRN2Q9H000 416 aaKnown RBP19.72■□□□□ 0.75
HLA-A-209ENST00000638375 SLC6A17Q9H1V8 727 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 POLMQ9NP87 494 aaPredicted RBP19.72■□□□□ 0.75
HLA-A-209ENST00000638375 PRMT8Q9NR22 394 aaPredicted RBP19.72■□□□□ 0.75
HLA-A-209ENST00000638375 SEPT10Q9P0V9 454 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 DNPEPQ9ULA0 475 aa19.72■□□□□ 0.75
HLA-A-209ENST00000638375 LIASO43766 372 aa19.71■□□□□ 0.75
HLA-A-209ENST00000638375 JCHAINP01591 159 aa19.71■□□□□ 0.75
HLA-A-209ENST00000638375 HLA-DQB2P05538 268 aa19.71■□□□□ 0.75
HLA-A-209ENST00000638375 GABRG2P18507 467 aa19.71■□□□□ 0.75
HLA-A-209ENST00000638375 RENBPP51606 427 aa19.71■□□□□ 0.75
HLA-A-209ENST00000638375 CCNHP51946 323 aaPredicted RBP19.71■□□□□ 0.75
HLA-A-209ENST00000638375 SNRPD1P62314 119 aaKnown RBP19.71■□□□□ 0.75
HLA-A-209ENST00000638375 WASHC5Q12768 1159 aa19.71■□□□□ 0.75
HLA-A-209ENST00000638375 ELAVL3Q14576 367 aaKnown RBP19.71■□□□□ 0.75
HLA-A-209ENST00000638375 DARS2Q6PI48 645 aaKnown RBP19.71■□□□□ 0.75
HLA-A-209ENST00000638375 CREG2Q8IUH2 290 aa19.71■□□□□ 0.75
HLA-A-209ENST00000638375 MAML2Q8IZL2 1156 aaPredicted RBP19.71■□□□□ 0.75
HLA-A-209ENST00000638375 CNTD1Q8N815 330 aa19.71■□□□□ 0.75
HLA-A-209ENST00000638375 OR6K2Q8NGY2 324 aa19.71■□□□□ 0.75
HLA-A-209ENST00000638375 HTR3CQ8WXA8 447 aa19.71■□□□□ 0.75
HLA-A-209ENST00000638375 CAPZA3Q96KX2 299 aa19.71■□□□□ 0.75
HLA-A-209ENST00000638375 GDAP1L1Q96MZ0 367 aa19.71■□□□□ 0.75
HLA-A-209ENST00000638375 MGME1Q9BQP7 344 aa19.71■□□□□ 0.75
HLA-A-209ENST00000638375 LRFN3Q9BTN0 628 aa19.71■□□□□ 0.75
HLA-A-209ENST00000638375 FRMD8P1Q9BZ68 369 aaPredicted RBP19.71■□□□□ 0.75
HLA-A-209ENST00000638375 NT5MQ9NPB1 228 aa19.71■□□□□ 0.75
HLA-A-209ENST00000638375 RBM22Q9NW64 420 aaKnown RBP eCLIP19.71■□□□□ 0.75
HLA-A-209ENST00000638375 BCLAF3A2AJT9 711 aaKnown RBP19.7■□□□□ 0.74
HLA-A-209ENST00000638375 RNF103O00237 685 aa19.7■□□□□ 0.74
HLA-A-209ENST00000638375 INSIG1O15503 277 aa19.7■□□□□ 0.74
HLA-A-209ENST00000638375 LAMTOR5O43504 91 aa19.7■□□□□ 0.74
HLA-A-209ENST00000638375 GJB3O75712 270 aa19.7■□□□□ 0.74
HLA-A-209ENST00000638375 IGSF6O95976 241 aa19.7■□□□□ 0.74
HLA-A-209ENST00000638375 CTSLP07711 333 aa19.7■□□□□ 0.74
HLA-A-209ENST00000638375 NDUFV2P19404 249 aa19.7■□□□□ 0.74
HLA-A-209ENST00000638375 CR2P20023 1033 aa19.7■□□□□ 0.74
HLA-A-209ENST00000638375 PTPN3P26045 913 aa19.7■□□□□ 0.74
HLA-A-209ENST00000638375 RECQLP46063 649 aaPredicted RBP19.7■□□□□ 0.74
HLA-A-209ENST00000638375 NRLP54845 237 aa19.7■□□□□ 0.74
HLA-A-209ENST00000638375 MAXP61244 160 aa19.7■□□□□ 0.74
HLA-A-209ENST00000638375 OASLQ15646 514 aaKnown RBP19.7■□□□□ 0.74
HLA-A-209ENST00000638375 HEATR6Q6AI08 1181 aaKnown RBP19.7■□□□□ 0.74
HLA-A-209ENST00000638375 ANO7Q6IWH7 933 aa19.7■□□□□ 0.74
HLA-A-209ENST00000638375 TSSK4Q6SA08 328 aa19.7■□□□□ 0.74
HLA-A-209ENST00000638375 BBS5Q8N3I7 341 aa19.7■□□□□ 0.74
HLA-A-209ENST00000638375 PRELID2Q8N945 189 aa19.7■□□□□ 0.74
HLA-A-209ENST00000638375 HMGB4Q8WW32 186 aa19.7■□□□□ 0.74
HLA-A-209ENST00000638375 OR8D1Q8WZ84 308 aa19.7■□□□□ 0.74
HLA-A-209ENST00000638375 CCDC114Q96M63 670 aa19.7■□□□□ 0.74
HLA-A-209ENST00000638375 NSMCE3Q96MG7 304 aa19.7■□□□□ 0.74
HLA-A-209ENST00000638375 RSPH9Q9H1X1 276 aaPredicted RBP19.7■□□□□ 0.74
HLA-A-209ENST00000638375 FBRSQ9HAH7 460 aa19.7■□□□□ 0.74
HLA-A-209ENST00000638375 USP29Q9HBJ7 922 aa19.7■□□□□ 0.74
HLA-A-209ENST00000638375 EVLQ9UI08 416 aaPredicted RBP19.7■□□□□ 0.74
HLA-A-209ENST00000638375 WASF2Q9Y6W5 498 aa19.7■□□□□ 0.74
HLA-A-209ENST00000638375 TTC24A2A3L6 582 aaPredicted RBP19.69■□□□□ 0.74
HLA-A-209ENST00000638375 ALOX15BO15296 676 aa19.69■□□□□ 0.74
HLA-A-209ENST00000638375 APBB3O95704 486 aa19.69■□□□□ 0.74
HLA-A-209ENST00000638375 C7P10643 843 aa19.69■□□□□ 0.74
HLA-A-209ENST00000638375 TDGF1P13385 188 aa19.69■□□□□ 0.74
HLA-A-209ENST00000638375 GKP32189 559 aa19.69■□□□□ 0.74
HLA-A-209ENST00000638375 CHRNA3P32297 505 aa19.69■□□□□ 0.74
HLA-A-209ENST00000638375 HSPA9P38646 679 aaKnown RBP19.69■□□□□ 0.74
HLA-A-209ENST00000638375 RPS14P62263 151 aaKnown RBP19.69■□□□□ 0.74
HLA-A-209ENST00000638375 SNX1Q13596 522 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms