RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 AVILO75366 819 aa18.04■□□□□ 0.48
CACNA1A-227ENST00000636549 BANF1O75531 89 aa18.04■□□□□ 0.48
CACNA1A-227ENST00000636549 SLC25A14O95258 325 aaPredicted RBP18.04■□□□□ 0.48
CACNA1A-227ENST00000636549 RCVRNP35243 200 aa18.04■□□□□ 0.48
CACNA1A-227ENST00000636549 VGLL4Q14135 290 aa18.04■□□□□ 0.48
CACNA1A-227ENST00000636549 QKIQ96PU8 341 aaKnown RBP eCLIP18.04■□□□□ 0.48
CACNA1A-227ENST00000636549 RIT2Q99578 217 aa18.04■□□□□ 0.48
CACNA1A-227ENST00000636549 RAD54BQ9Y620 910 aa18.04■□□□□ 0.48
CACNA1A-227ENST00000636549 CPED1A4D0V7 1026 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 TISP43B9A030 160 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 KPNA5O15131 536 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 PDK2Q15119 407 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 ALX1Q15699 326 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 ZDHHC20Q5W0Z9 365 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 OR5T3Q8NGG3 340 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 TMEM237Q96Q45 408 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 TECPR2O15040 1411 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 CYP11B2P19099 503 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 CACNA2D1P54289 1103 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 VPS33AQ96AX1 596 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 MCRS1Q96EZ8 462 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 HTATIP2Q9BUP3 242 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 GTF3C4Q9UKN8 822 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 CNOT6Q9ULM6 557 aaKnown RBP18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 KPNA6O60684 536 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 FBXO21O94952 628 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 STATHP02808 62 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 NRG1Q02297 640 aaPredicted RBP18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 PCDH20Q8N6Y1 951 aaKnown RBP18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 PEX11AO75192 247 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 CD99L2Q8TCZ2 262 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 DDX3YO15523 660 aaKnown RBP18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 F9P00740 461 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 C4BPBP20851 252 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 KCNA5P22460 613 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 DHPSP49366 369 aaPredicted RBP18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 SNRPD1P62314 119 aaKnown RBP18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 REPS2Q8NFH8 660 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 FOXP3Q9BZS1 431 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 CRISPLD1Q9H336 500 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 DDX18Q9NVP1 670 aaKnown RBP18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 NCDNQ9UBB6 729 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 STK39Q9UEW8 545 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 A0A087X0B3 334 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 ENPP3O14638 875 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 OR4Q2P0C623 313 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 NT5EP21589 574 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 SPIBQ01892 262 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 SLC20A2Q08357 652 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 PHF19Q5T6S3 580 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 WDR60Q8WVS4 1066 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 KBTBD7Q8WVZ9 684 aa18.03■□□□□ 0.48
CACNA1A-227ENST00000636549 CPSF1Q10570 1443 aaKnown RBP18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 ZNF189O75820 626 aaPredicted RBP18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 PCDH1Q08174 1060 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 GRB10Q13322 594 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 AADACL2Q6P093 401 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 OR56A4Q8NGH8 313 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 C1orf50Q9BV19 199 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 RHPN2P1A8MT19 583 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 PLGP00747 810 aaPredicted RBP18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 FAM91A1Q658Y4 838 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 RASGRP3Q8IV61 690 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 MAGEC3Q8TD91 643 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 SETD7Q8WTS6 366 aaKnown RBP18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 SENP8Q96LD8 212 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 EPB41L4BQ9H329 900 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 NRDE2Q9H7Z3 1164 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 DNAJC11Q9NVH1 559 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 ZNF839A8K0R7 811 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 RBP1P09455 135 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 CXCR2P25025 360 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 PPP2R2DQ66LE6 453 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 ZNF677Q86XU0 584 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 WDR49Q8IV35 697 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 SLC9A9Q8IVB4 645 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 USP38Q8NB14 1042 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 CCDC126Q96EE4 140 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 EHD3Q9NZN3 535 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 ITGA11Q9UKX5 1188 aa18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 MTF2Q9Y483 593 aaPredicted RBP18.02■□□□□ 0.48
CACNA1A-227ENST00000636549 NTSR2O95665 410 aa18.02■□□□□ 0.47
CACNA1A-227ENST00000636549 TMEM253P0C7T8 217 aa18.02■□□□□ 0.47
CACNA1A-227ENST00000636549 PRKAR2AP13861 404 aaKnown RBP18.02■□□□□ 0.47
CACNA1A-227ENST00000636549 ITFG1Q8TB96 612 aa18.02■□□□□ 0.47
CACNA1A-227ENST00000636549 MAGEE2Q8TD90 523 aaPredicted RBP18.02■□□□□ 0.47
CACNA1A-227ENST00000636549 TMLHEQ9NVH6 421 aa18.02■□□□□ 0.47
CACNA1A-227ENST00000636549 ERVK-11Q9UQG0 969 aa18.02■□□□□ 0.47
CACNA1A-227ENST00000636549 FCHO1O14526 889 aa18.02■□□□□ 0.47
CACNA1A-227ENST00000636549 PPP1R37O75864 691 aa18.02■□□□□ 0.47
CACNA1A-227ENST00000636549 RAD9BQ6WBX8 426 aa18.02■□□□□ 0.47
CACNA1A-227ENST00000636549 EIF3MQ7L2H7 374 aaKnown RBP18.02■□□□□ 0.47
CACNA1A-227ENST00000636549 Q8N9G6 341 aaPredicted RBP18.02■□□□□ 0.47
CACNA1A-227ENST00000636549 MLPHQ9BV36 600 aaPredicted RBP18.02■□□□□ 0.47
CACNA1A-227ENST00000636549 FAM126AQ9BYI3 521 aaPredicted RBP18.02■□□□□ 0.47
CACNA1A-227ENST00000636549 TRIM64BA6NI03 449 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 LINC00032P0C843 101 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 SMIM10L2AP0DMW4 78 aa18.01■□□□□ 0.47
CACNA1A-227ENST00000636549 SMIM10L2BP0DMW5 78 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms