RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 PCDH20Q8N6Y1 951 aaKnown RBP11.32□□□□□ -0.6
DDX41-219ENST00000629036 ATP11CQ8NB49 1132 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 SLC35G2Q8TBE7 412 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 ARRDC3Q96B67 414 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 FAF2Q96CS3 445 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 NSMCE3Q96MG7 304 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 NCAPGQ9BPX3 1015 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 SPON2Q9BUD6 331 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 SLC39A8Q9C0K1 460 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 PCED1AQ9H1Q7 454 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 TNKS2Q9H2K2 1166 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 DEF6Q9H4E7 631 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 CATSPERBQ9H7T0 1116 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 ZWILCHQ9H900 591 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 EBF2Q9HAK2 575 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 CAPN10Q9HC96 672 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 VPS45Q9NRW7 570 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 CTTNBP2NLQ9P2B4 639 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 LHX3Q9UBR4 397 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 EVLQ9UI08 416 aaPredicted RBP11.32□□□□□ -0.6
DDX41-219ENST00000629036 SALL4Q9UJQ4 1053 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 FZD4Q9ULV1 537 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 SCML1Q9UN30 329 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 SCN8AQ9UQD0 1980 aa11.31□□□□□ -0.6
DDX41-219ENST00000629036 C3orf70A6NLC5 250 aaPredicted RBP11.31□□□□□ -0.6
DDX41-219ENST00000629036 METTL12A8MUP2 240 aa11.31□□□□□ -0.6
DDX41-219ENST00000629036 J3KR12 359 aa11.31□□□□□ -0.6
DDX41-219ENST00000629036 MYO1FO00160 1098 aa11.31□□□□□ -0.6
DDX41-219ENST00000629036 PRAMEF11O60813 436 aa11.31□□□□□ -0.6
DDX41-219ENST00000629036 TMCC1O94876 653 aa11.31□□□□□ -0.6
DDX41-219ENST00000629036 SEMA4FO95754 770 aa11.31□□□□□ -0.6
DDX41-219ENST00000629036 DNTTP04053 509 aa11.31□□□□□ -0.6
DDX41-219ENST00000629036 C5AR1P21730 350 aa11.31□□□□□ -0.6
DDX41-219ENST00000629036 HOXD12P35452 270 aa11.31□□□□□ -0.6
DDX41-219ENST00000629036 BNC1Q01954 994 aa11.31□□□□□ -0.6
DDX41-219ENST00000629036 SLC20A2Q08357 652 aa11.31□□□□□ -0.6
DDX41-219ENST00000629036 CNTN1Q12860 1018 aa11.31□□□□□ -0.6
DDX41-219ENST00000629036 MMRN1Q13201 1228 aa11.31□□□□□ -0.6
DDX41-219ENST00000629036 DPYSL3Q14195 570 aa11.31□□□□□ -0.6
DDX41-219ENST00000629036 BOLA3Q53S33 107 aa11.31□□□□□ -0.6
DDX41-219ENST00000629036 PPP6R3Q5H9R7 873 aaPredicted RBP11.31□□□□□ -0.6
DDX41-219ENST00000629036 RETSATQ6NUM9 610 aa11.31□□□□□ -0.6
DDX41-219ENST00000629036 PIP4K2CQ8TBX8 421 aa11.31□□□□□ -0.6
DDX41-219ENST00000629036 OR8D1Q8WZ84 308 aa11.31□□□□□ -0.6
DDX41-219ENST00000629036 HSPH1Q92598 858 aa11.31□□□□□ -0.6
DDX41-219ENST00000629036 CELF6Q96J87 481 aaKnown RBP11.31□□□□□ -0.6
DDX41-219ENST00000629036 NEUROG2Q9H2A3 272 aa11.31□□□□□ -0.6
DDX41-219ENST00000629036 FBXL12Q9NXK8 326 aa11.31□□□□□ -0.6
DDX41-219ENST00000629036 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.31□□□□□ -0.6
DDX41-219ENST00000629036 DMXL2Q8TDJ6 3036 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 ZSCAN5CA6NGD5 496 aaPredicted RBP11.3□□□□□ -0.6
DDX41-219ENST00000629036 CDX4O14627 284 aaPredicted RBP11.3□□□□□ -0.6
DDX41-219ENST00000629036 TM4SF5O14894 197 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 MAP3K13O43283 966 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 LATO43561 262 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 PLRG1O43660 514 aaKnown RBP11.3□□□□□ -0.6
DDX41-219ENST00000629036 ZIC2O95409 532 aaPredicted RBP11.3□□□□□ -0.6
DDX41-219ENST00000629036 GSRP00390 522 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 IL1BP01584 269 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 ACADMP11310 421 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 SPINK2P20155 84 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 AMPD1P23109 780 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 MAOBP27338 520 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 GKP32189 559 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 CHRNA3P32297 505 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 NNMTP40261 264 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 RGRP47804 291 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 PAPOLAP51003 745 aaKnown RBP11.3□□□□□ -0.6
DDX41-219ENST00000629036 CCNHP51946 323 aaPredicted RBP11.3□□□□□ -0.6
DDX41-219ENST00000629036 LIMK1P53667 647 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 PPP2CBP62714 309 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 PPP2CAP67775 309 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 IRX4P78413 519 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 CYTH1Q15438 398 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 TTC31Q49AM3 519 aaPredicted RBP11.3□□□□□ -0.6
DDX41-219ENST00000629036 INO80DQ53TQ3 878 aaPredicted RBP11.3□□□□□ -0.6
DDX41-219ENST00000629036 DCAF12L1Q5VU92 463 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 SLC23A3Q6PIS1 610 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 NCEH1Q6PIU2 408 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 CCDC170Q8IYT3 715 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 PQLC3Q8N755 202 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 TMIEQ8NEW7 156 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 PCDH19Q8TAB3 1148 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 PIGKQ92643 395 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 BIRC7Q96CA5 298 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 TM6SF2Q9BZW4 377 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 BTBD1Q9H0C5 482 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 GOLPH3Q9H4A6 298 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 SGK2Q9HBY8 427 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 FSCN3Q9NQT6 498 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 KLHL11Q9NVR0 708 aa11.3□□□□□ -0.6
DDX41-219ENST00000629036 RCOR3Q9P2K3 495 aaPredicted RBP11.3□□□□□ -0.6
DDX41-219ENST00000629036 TDRD6O60522 2096 aaKnown RBP11.3□□□□□ -0.6
DDX41-219ENST00000629036 ITPR1Q14643 2758 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 A0A0U1RQJ8 604 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 H3BRJ5 948 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 MUSKO15146 869 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 ZBTB24O43167 697 aaPredicted RBP11.29□□□□□ -0.6
DDX41-219ENST00000629036 SLC7A4O43246 635 aa11.29□□□□□ -0.6
DDX41-219ENST00000629036 MFSD11O43934 449 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms