RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 OTUD6BQ8N6M0 293 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 DNAJC5GQ8N7S2 189 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 ACMSDQ8TDX5 336 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 ZFRQ96KR1 1074 aaKnown RBP13.42□□□□□ -0.26
C3orf56-201ENST00000624688 RBBP8Q99708 897 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 FSD1LQ9BXM9 530 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 ATXN3LQ9H3M9 355 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 RETREG1Q9H6L5 497 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 MANSC1Q9H8J5 431 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 IL21Q9HBE4 155 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 C20orf96Q9NUD7 363 aaPredicted RBP13.42□□□□□ -0.26
C3orf56-201ENST00000624688 AGO1Q9UL18 857 aaKnown RBP13.42□□□□□ -0.26
C3orf56-201ENST00000624688 MAFFQ9ULX9 164 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 MYO1CO00159 1063 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 MUSKO15146 869 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 SPATA31D3P0C874 917 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 IRF1P10914 325 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 ETFBP38117 255 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 MAGEA12P43365 314 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 SERPINB4P48594 390 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 NUMBP49757 651 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 LIMK2P53671 638 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 EPHB3P54753 998 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 GNA12Q03113 381 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 MSLNQ13421 630 aaPredicted RBP13.42□□□□□ -0.26
C3orf56-201ENST00000624688 PDE1CQ14123 709 aaPredicted RBP13.42□□□□□ -0.26
C3orf56-201ENST00000624688 PCSK7Q16549 785 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 RNF187Q5TA31 235 aaPredicted RBP13.42□□□□□ -0.26
C3orf56-201ENST00000624688 SPATA31D4Q6ZUB0 917 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 OTOAQ7RTW8 1153 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 STRA8Q7Z7C7 330 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 OR7D4Q8NG98 312 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 ATP2A3Q93084 1043 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 ISL2Q96A47 359 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 SLC22A12Q96S37 553 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 MAGEH1Q9H213 219 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 MRM3Q9HC36 420 aaKnown RBP13.42□□□□□ -0.26
C3orf56-201ENST00000624688 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.42□□□□□ -0.26
C3orf56-201ENST00000624688 VPS45Q9NRW7 570 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 IARS2Q9NSE4 1012 aaKnown RBP13.42□□□□□ -0.26
C3orf56-201ENST00000624688 ARL2BPQ9Y2Y0 163 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 TCAF1Q9Y4C2 921 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 PCDHB12Q9Y5F1 795 aa13.42□□□□□ -0.26
C3orf56-201ENST00000624688 MIA3Q5JRA6 1907 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 GOLGA8TH3BQL2 631 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 GJB3O75712 270 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 CNPP09543 421 aaKnown RBP13.41□□□□□ -0.26
C3orf56-201ENST00000624688 CTSAP10619 480 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 ARNTP27540 789 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 ARCN1P48444 511 aaKnown RBP13.41□□□□□ -0.26
C3orf56-201ENST00000624688 ITKQ08881 620 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 RABGAP1LQ5R372 815 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 ADGRF1Q5T601 910 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 TMCO4Q5TGY1 634 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 PDPK2PQ6A1A2 396 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 ESRP1Q6NXG1 681 aaKnown RBP13.41□□□□□ -0.26
C3orf56-201ENST00000624688 CCDC121Q6ZUS5 278 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 CCDC63Q8NA47 563 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 ARMC2Q8NEN0 867 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 PPHLN1Q8NEY8 458 aaKnown RBP13.41□□□□□ -0.26
C3orf56-201ENST00000624688 ADAMTS19Q8TE59 1207 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 NSMCE1Q8WV22 266 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 PTCD2Q8WV60 388 aaKnown RBP13.41□□□□□ -0.26
C3orf56-201ENST00000624688 CYP2S1Q96SQ9 504 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 IQCGQ9H095 443 aaKnown RBP13.41□□□□□ -0.26
C3orf56-201ENST00000624688 KDM4CQ9H3R0 1056 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 TREX1Q9NSU2 369 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 TXNDC16Q9P2K2 825 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 UXTQ9UBK9 157 aaPredicted RBP13.41□□□□□ -0.26
C3orf56-201ENST00000624688 SLC2A6Q9UGQ3 507 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 STOML2Q9UJZ1 356 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 EMCNQ9ULC0 261 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 ACTL7AQ9Y615 435 aa13.41□□□□□ -0.26
C3orf56-201ENST00000624688 ZBBXA8MT70 800 aa13.4□□□□□ -0.26
C3orf56-201ENST00000624688 TGM5O43548 720 aa13.4□□□□□ -0.26
C3orf56-201ENST00000624688 GREM1O60565 184 aa13.4□□□□□ -0.26
C3orf56-201ENST00000624688 OLFM2O95897 454 aa13.4□□□□□ -0.26
C3orf56-201ENST00000624688 PRKCGP05129 697 aa13.4□□□□□ -0.26
C3orf56-201ENST00000624688 BGNP21810 368 aa13.4□□□□□ -0.26
C3orf56-201ENST00000624688 SPRP35270 261 aaPredicted RBP13.4□□□□□ -0.26
C3orf56-201ENST00000624688 ZXDBP98169 803 aa13.4□□□□□ -0.26
C3orf56-201ENST00000624688 CREMQ03060 361 aa13.4□□□□□ -0.26
C3orf56-201ENST00000624688 LACTB2Q53H82 288 aaPredicted RBP13.4□□□□□ -0.26
C3orf56-201ENST00000624688 PPM1JQ5JR12 505 aa13.4□□□□□ -0.26
C3orf56-201ENST00000624688 FSTL4Q6MZW2 842 aa13.4□□□□□ -0.26
C3orf56-201ENST00000624688 CHST9Q7L1S5 443 aa13.4□□□□□ -0.26
C3orf56-201ENST00000624688 FIBCD1Q8N539 461 aa13.4□□□□□ -0.26
C3orf56-201ENST00000624688 DCLK2Q8N568 766 aa13.4□□□□□ -0.26
C3orf56-201ENST00000624688 SLC25A41Q8N5S1 370 aa13.4□□□□□ -0.26
C3orf56-201ENST00000624688 ZNF599Q96NL3 588 aa13.4□□□□□ -0.26
C3orf56-201ENST00000624688 MECRQ9BV79 373 aa13.4□□□□□ -0.26
C3orf56-201ENST00000624688 ABCF3Q9NUQ8 709 aa13.4□□□□□ -0.26
C3orf56-201ENST00000624688 SMPD4Q9NXE4 827 aa13.4□□□□□ -0.26
C3orf56-201ENST00000624688 MTO1Q9Y2Z2 717 aaKnown RBP13.4□□□□□ -0.26
C3orf56-201ENST00000624688 LOC285095A0A1B0GVY8 99 aa13.39□□□□□ -0.27
C3orf56-201ENST00000624688 TSPAN3O60637 253 aa13.39□□□□□ -0.27
C3orf56-201ENST00000624688 CLDN11O75508 207 aa13.39□□□□□ -0.27
C3orf56-201ENST00000624688 GSRP00390 522 aa13.39□□□□□ -0.27
C3orf56-201ENST00000624688 ATXN1LP0C7T5 689 aaKnown RBP13.39□□□□□ -0.27
C3orf56-201ENST00000624688 MBL2P11226 248 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms