RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 TMEM209Q96SK2 561 aa13.61□□□□□ -0.23
PCDHB17P-202ENST00000623466 CCDC28BQ9BUN5 200 aa13.61□□□□□ -0.23
PCDHB17P-202ENST00000623466 DOLKQ9UPQ8 538 aa13.61□□□□□ -0.23
PCDHB17P-202ENST00000623466 SLC45A1Q9Y2W3 748 aa13.61□□□□□ -0.23
PCDHB17P-202ENST00000623466 STAU1O95793 577 aaKnown RBP13.61□□□□□ -0.23
PCDHB17P-202ENST00000623466 CHRNA1P02708 482 aa13.61□□□□□ -0.23
PCDHB17P-202ENST00000623466 NCAM1P13591 858 aa13.61□□□□□ -0.23
PCDHB17P-202ENST00000623466 MAGEA6P43360 314 aa13.61□□□□□ -0.23
PCDHB17P-202ENST00000623466 ARHGAP17Q68EM7 881 aa13.61□□□□□ -0.23
PCDHB17P-202ENST00000623466 TIFABQ6ZNK6 161 aa13.61□□□□□ -0.23
PCDHB17P-202ENST00000623466 PCED1BQ96HM7 432 aa13.61□□□□□ -0.23
PCDHB17P-202ENST00000623466 COPS7BQ9H9Q2 264 aaPredicted RBP13.61□□□□□ -0.23
PCDHB17P-202ENST00000623466 TXNDC16Q9P2K2 825 aa13.61□□□□□ -0.23
PCDHB17P-202ENST00000623466 ARHGAP26Q9UNA1 814 aa13.61□□□□□ -0.23
PCDHB17P-202ENST00000623466 LZTS1Q9Y250 596 aa13.61□□□□□ -0.23
PCDHB17P-202ENST00000623466 SSX2IPQ9Y2D8 614 aa13.61□□□□□ -0.23
PCDHB17P-202ENST00000623466 A0A1B0GTW7 788 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 STX16-NPEPL1H3BU86 382 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 VILLO15195 856 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 DNAJA2O60884 412 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 B3GAT3O94766 335 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 HSPA4LO95757 839 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 CLPTM1O96005 669 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 CPA3P15088 417 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 TCN1P20061 433 aaPredicted RBP13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 CD52P31358 61 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 CAP1Q01518 475 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 PPP2R5DQ14738 602 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 NADK2Q4G0N4 442 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 OTUD1Q5VV17 481 aaPredicted RBP13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 CDKL3Q8IVW4 592 aaPredicted RBP13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 JADE3Q92613 823 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 DGCR14Q96DF8 476 aaKnown RBP13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 MARK4Q96L34 752 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 SYBUQ9NX95 663 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 HAS3O00219 553 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 GCATO75600 419 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 TRPA1O75762 1119 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 ITGB1P05556 798 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 THPOP40225 353 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 ARL4AP40617 200 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 MATKP42679 507 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 RXRGP48443 463 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 SERPINB8P50452 374 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 IRF9Q00978 393 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 NIPAL4Q0D2K0 466 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 C6orf52Q5T4I8 152 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 SNX32Q86XE0 403 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 IQCF2Q8IXL9 164 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 PQLC1Q8N2U9 271 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 DIS3LQ8TF46 1054 aaKnown RBP13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 APBB2Q92870 758 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 ZNF560Q96MR9 790 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 CDRT15Q96T59 188 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 DUSP16Q9BY84 665 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 PRDM12Q9H4Q4 367 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 FAM105AQ9NUU6 356 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 LTFP02788 710 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 FYNP06241 537 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 CHRNGP07510 517 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 NPR3P17342 541 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 XRCC1P18887 633 aaPredicted RBP13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 EPHA3P29320 983 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 THOP1P52888 689 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 DPYSL2Q16555 572 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 SV2CQ496J9 727 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 MAP3K21Q5TCX8 1036 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 COLGALT1Q8NBJ5 622 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 FAM156AQ8NDB6 213 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 ARNTL2Q8WYA1 636 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 CDKL2Q92772 493 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 CELF6Q96J87 481 aaKnown RBP13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 TNIP3Q96KP6 325 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 PRPF18Q99633 342 aaKnown RBP13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 SMOQ99835 787 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 SIK2Q9H0K1 926 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 DCDC2Q9UHG0 476 aa13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 FAF1Q9UNN5 650 aaPredicted RBP13.6□□□□□ -0.23
PCDHB17P-202ENST00000623466 SMIM31A0A1B0GVY4 71 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 DPYSL4O14531 572 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 MGEA5O60502 916 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 ELNP15502 786 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 TPSB2P20231 275 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 SAT1P21673 171 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 BDNFP23560 247 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 TPSAB1Q15661 275 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 TIGD5Q53EQ6 642 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 TMEM198Q66K66 360 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 RASAL3Q86YV0 1011 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 ZMIZ2Q8NF64 920 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 SCAMP5Q8TAC9 235 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 FNDC8Q8TC99 324 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 PRICKLE1Q96MT3 831 aaPredicted RBP13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 AGAP2Q99490 1192 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 FAIMQ9NVQ4 179 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 DNAJC28Q9NX36 388 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 DERAQ9Y315 318 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 ARL5CA6NH57 179 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 GOLGA8TH3BQL2 631 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 MDM4O15151 490 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms