RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 KCNJ2P63252 427 aa18.76■□□□□ 0.59
PCDHB2-202ENST00000622947 TAF11Q15544 211 aa18.76■□□□□ 0.59
PCDHB2-202ENST00000622947 TMEM135Q86UB9 458 aa18.76■□□□□ 0.59
PCDHB2-202ENST00000622947 DYDC1Q8WWB3 177 aa18.76■□□□□ 0.59
PCDHB2-202ENST00000622947 EZH1Q92800 747 aaPredicted RBP18.76■□□□□ 0.59
PCDHB2-202ENST00000622947 CLP1Q92989 425 aaKnown RBP18.76■□□□□ 0.59
PCDHB2-202ENST00000622947 TTC17Q96AE7 1141 aa18.76■□□□□ 0.59
PCDHB2-202ENST00000622947 MFSD3Q96ES6 412 aa18.76■□□□□ 0.59
PCDHB2-202ENST00000622947 NAF1Q96HR8 494 aaKnown RBP18.76■□□□□ 0.59
PCDHB2-202ENST00000622947 ZNF778Q96MU6 729 aa18.76■□□□□ 0.59
PCDHB2-202ENST00000622947 KLF16Q9BXK1 252 aaPredicted RBP18.76■□□□□ 0.59
PCDHB2-202ENST00000622947 ZFP37Q9Y6Q3 630 aaPredicted RBP18.76■□□□□ 0.59
PCDHB2-202ENST00000622947 RPS6KL1Q9Y6S9 549 aa18.76■□□□□ 0.59
PCDHB2-202ENST00000622947 A0A0D9SEW6 157 aa18.75■□□□□ 0.59
PCDHB2-202ENST00000622947 IQANK1A0A1B0GTG1 560 aa18.75■□□□□ 0.59
PCDHB2-202ENST00000622947 ZCWPW2A0A1B0GU75 182 aa18.75■□□□□ 0.59
PCDHB2-202ENST00000622947 TTC24A2A3L6 582 aaPredicted RBP18.75■□□□□ 0.59
PCDHB2-202ENST00000622947 TRIM49D1C9J1S8 452 aa18.75■□□□□ 0.59
PCDHB2-202ENST00000622947 SCAMP3O14828 347 aaKnown RBP18.75■□□□□ 0.59
PCDHB2-202ENST00000622947 F11P03951 625 aa18.75■□□□□ 0.59
PCDHB2-202ENST00000622947 ERVK-10P10266 1014 aa18.75■□□□□ 0.59
PCDHB2-202ENST00000622947 IRF1P10914 325 aa18.75■□□□□ 0.59
PCDHB2-202ENST00000622947 CA4P22748 312 aa18.75■□□□□ 0.59
PCDHB2-202ENST00000622947 CORO1AP31146 461 aaKnown RBP18.75■□□□□ 0.59
PCDHB2-202ENST00000622947 SLC18A1P54219 525 aa18.75■□□□□ 0.59
PCDHB2-202ENST00000622947 POLD3Q15054 466 aaPredicted RBP18.75■□□□□ 0.59
PCDHB2-202ENST00000622947 TAF12Q16514 161 aa18.75■□□□□ 0.59
PCDHB2-202ENST00000622947 TMEM240Q5SV17 173 aa18.75■□□□□ 0.59
PCDHB2-202ENST00000622947 FIBCD1Q8N539 461 aa18.75■□□□□ 0.59
PCDHB2-202ENST00000622947 IPMKQ8NFU5 416 aa18.75■□□□□ 0.59
PCDHB2-202ENST00000622947 CHRAC1Q9NRG0 131 aa18.75■□□□□ 0.59
PCDHB2-202ENST00000622947 SMPD4Q9NXE4 827 aa18.75■□□□□ 0.59
PCDHB2-202ENST00000622947 NKIRAS1Q9NYS0 192 aa18.75■□□□□ 0.59
PCDHB2-202ENST00000622947 MIA3Q5JRA6 1907 aa18.75■□□□□ 0.59
PCDHB2-202ENST00000622947 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 F5H5T6 163 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 RAMP2O60895 175 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 GJB3O75712 270 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 CSPG5O95196 566 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 VIMP08670 466 aaKnown RBP18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 F7P08709 466 aaPredicted RBP18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 HSPA1AP0DMV8 641 aaKnown RBP18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 HSPA1BP0DMV9 641 aaKnown RBP18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 HARS2P49590 506 aaKnown RBP18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 SERINC3Q13530 473 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 HNRNPDQ14103 355 aaKnown RBP18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 PRPSAP1Q14558 356 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 VEPH1Q14D04 833 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 TTC39BQ5VTQ0 682 aaPredicted RBP18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 PGBD5Q8N414 524 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 PABPC5Q96DU9 382 aaKnown RBP18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 MRGPRX2Q96LB1 330 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 SSU72Q9NP77 194 aaKnown RBP18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 BFARQ9NZS9 450 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 AGO1Q9UL18 857 aaKnown RBP18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 AAR2Q9Y312 384 aaKnown RBP18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 ACTL7AQ9Y615 435 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 DPPA5A6NC42 116 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 TCP11X1B4DZS4 312 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 PMPCBO75439 489 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 MT-ND3P03897 115 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 PYGBP11216 843 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 CA8P35219 290 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 SF3A3Q12874 501 aaKnown RBP eCLIP18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 KDELC2Q7Z4H8 507 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 SPRED2Q7Z698 418 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 CCNJLQ8IV13 435 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 TEX26Q8N6G2 289 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 ADAMTS19Q8TE59 1207 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 FATE1Q969F0 183 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 NAT9Q9BTE0 207 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 ATXN3LQ9H3M9 355 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 NT5MQ9NPB1 228 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 SLC17A7Q9P2U7 560 aa18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 SMG5Q9UPR3 1016 aaKnown RBP18.74■□□□□ 0.59
PCDHB2-202ENST00000622947 RFPL1O75677 317 aa18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 POLBP06746 335 aa18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 MMP2P08253 660 aa18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 EPHB3P54753 998 aa18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 MXRA7P84157 204 aa18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 SLC18A2Q05940 514 aa18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 ANKRD20A4Q4UJ75 823 aa18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 TXNDC8Q6A555 127 aa18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 NAPEPLDQ6IQ20 393 aa18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 LILRA6Q6PI73 481 aa18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 CDHR3Q6ZTQ4 885 aa18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 MARK2Q7KZI7 788 aaKnown RBP18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 TCP10LQ8TDR4 215 aa18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 ATP2A3Q93084 1043 aa18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 ZNF669Q96BR6 464 aaPredicted RBP18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 PLD4Q96BZ4 506 aa18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 TBL1YQ9BQ87 522 aa18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 FICDQ9BVA6 458 aa18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 ECT2Q9H8V3 914 aa18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 WFS1O76024 890 aa18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 SNRPAP09012 282 aaKnown RBP18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 CHRNA4P43681 627 aa18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 MAPKAPK2P49137 400 aa18.73■□□□□ 0.59
PCDHB2-202ENST00000622947 SLC11A2P49281 568 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms