RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 LMAN1P49257 510 aa18.1■□□□□ 0.49
PTCHD3-202ENST00000622555 STK19P49842 368 aaPredicted RBP18.1■□□□□ 0.49
PTCHD3-202ENST00000622555 ECT2LQ008S8 904 aa18.1■□□□□ 0.49
PTCHD3-202ENST00000622555 SLC20A2Q08357 652 aa18.1■□□□□ 0.49
PTCHD3-202ENST00000622555 MESP2Q0VG99 397 aa18.1■□□□□ 0.49
PTCHD3-202ENST00000622555 SEMA5AQ13591 1074 aa18.1■□□□□ 0.49
PTCHD3-202ENST00000622555 PRPSAP1Q14558 356 aa18.1■□□□□ 0.49
PTCHD3-202ENST00000622555 HIBCHQ6NVY1 386 aaPredicted RBP18.1■□□□□ 0.49
PTCHD3-202ENST00000622555 ZDHHC24Q6UX98 284 aa18.1■□□□□ 0.49
PTCHD3-202ENST00000622555 CCNI2Q6ZMN8 369 aaPredicted RBP18.1■□□□□ 0.49
PTCHD3-202ENST00000622555 ATP11CQ8NB49 1132 aa18.1■□□□□ 0.49
PTCHD3-202ENST00000622555 TSEN2Q8NCE0 465 aaKnown RBP18.1■□□□□ 0.49
PTCHD3-202ENST00000622555 FBXO25Q8TCJ0 367 aa18.1■□□□□ 0.49
PTCHD3-202ENST00000622555 ART4Q93070 314 aa18.1■□□□□ 0.49
PTCHD3-202ENST00000622555 TTC17Q96AE7 1141 aa18.1■□□□□ 0.49
PTCHD3-202ENST00000622555 CHFRQ96EP1 664 aa18.1■□□□□ 0.49
PTCHD3-202ENST00000622555 PSKH2Q96QS6 385 aa18.1■□□□□ 0.49
PTCHD3-202ENST00000622555 POLR1EQ9GZS1 481 aaKnown RBP18.1■□□□□ 0.49
PTCHD3-202ENST00000622555 FARP1Q9Y4F1 1045 aaPredicted RBP18.1■□□□□ 0.49
PTCHD3-202ENST00000622555 COL4A2P08572 1712 aa18.1■□□□□ 0.49
PTCHD3-202ENST00000622555 CXorf51AA0A1B0GTR3 108 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 MUSKO15146 869 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 MYBL2P10244 700 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 EIF2DP41214 584 aaKnown RBP18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 CAV1Q03135 178 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 KCNJ11Q14654 390 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 MORF4L2Q15014 288 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 ANKRD22Q5VYY1 191 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 SORCS1Q8WY21 1168 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 EXOC4Q96A65 974 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 FCRL5Q96RD9 977 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 GORASP1Q9BQQ3 440 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 FUT8Q9BYC5 575 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 NEUROG2Q9H2A3 272 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 ZDHHC18Q9NUE0 388 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 SHOC2Q9UQ13 582 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 TCRBV7S3A2A0A539 114 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 LOC730098B7Z3J9 87 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 TP73O15350 636 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 SMAD6O43541 496 aaKnown RBP18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 ATP5BP06576 529 aaKnown RBP18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 ECHS1P30084 290 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 HSPA9P38646 679 aaKnown RBP18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 RHOAP61586 193 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 DSC2Q02487 901 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 PREPLQ4J6C6 727 aaPredicted RBP18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 METTL3Q86U44 580 aaKnown RBP18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 HOOK3Q86VS8 718 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 PHTF2Q8N3S3 785 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 NAT8LQ8N9F0 302 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 EIF1ADQ8N9N8 165 aaKnown RBP18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 TERB1Q8NA31 727 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 SPATA22Q8NHS9 363 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 CYB5D2Q8WUJ1 264 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 PRCCQ92733 491 aaPredicted RBP18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 EXOC2Q96KP1 924 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 SEMA3CQ99985 751 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 MGME1Q9BQP7 344 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 FAM129AQ9BZQ8 928 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 SLC25A51Q9H1U9 297 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 TRPV5Q9NQA5 729 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 UBP1Q9NZI7 540 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 ERVW-1Q9UQF0 538 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 HS3ST2Q9Y278 367 aa18.09■□□□□ 0.49
PTCHD3-202ENST00000622555 ANKRD36A6QL64 1941 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 TTC24A2A3L6 582 aaPredicted RBP18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 GOLGA6CA6NDK9 693 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 GOLGA6BA6NDN3 693 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 TBC1D3BA6NDS4 549 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 PRRT4C9JH25 899 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 GOLGA8MH3BSY2 632 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 MAP2K7O14733 419 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 SASH3O75995 380 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 ANXA9O76027 345 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 ASLP04424 464 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 GOLGA6DP0CG33 693 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 SRCP12931 536 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 MAGEA6P43360 314 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 NIPAL4Q0D2K0 466 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 RNF135Q8IUD6 432 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 KRT222Q8N1A0 295 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 SH2D3CQ8N5H7 860 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 PDCD7Q8N8D1 485 aaKnown RBP18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 DNASE1L2Q92874 299 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 IMP4Q96G21 291 aaKnown RBP18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 OXNAD1Q96HP4 312 aaPredicted RBP18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 PPP1R2P1Q96PQ5 205 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 RBM15Q96T37 977 aaKnown RBP eCLIP18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 MLPHQ9BV36 600 aaPredicted RBP18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 ELOVL2Q9NXB9 296 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 GOLGA6AQ9NYA3 693 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 THEGQ9P2T0 379 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 LHX3Q9UBR4 397 aa18.08■□□□□ 0.48
PTCHD3-202ENST00000622555 SMAPO00193 183 aa18.07■□□□□ 0.48
PTCHD3-202ENST00000622555 ERLIN1O75477 346 aa18.07■□□□□ 0.48
PTCHD3-202ENST00000622555 TMEM63AO94886 807 aa18.07■□□□□ 0.48
PTCHD3-202ENST00000622555 KAT7O95251 611 aa18.07■□□□□ 0.48
PTCHD3-202ENST00000622555 APODP05090 189 aa18.07■□□□□ 0.48
PTCHD3-202ENST00000622555 DLDP09622 509 aaKnown RBP18.07■□□□□ 0.48
PTCHD3-202ENST00000622555 TPSB2P20231 275 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms