RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 ARHGAP36Q6ZRI8 547 aa15.99■□□□□ 0.15
NPHP4-211ENST00000622020 ZC3HC1Q86WB0 502 aaKnown RBP15.99■□□□□ 0.15
NPHP4-211ENST00000622020 BEST2Q8NFU1 509 aa15.99■□□□□ 0.15
NPHP4-211ENST00000622020 TMEM79Q9BSE2 394 aa15.99■□□□□ 0.15
NPHP4-211ENST00000622020 TRIM8Q9BZR9 551 aa15.99■□□□□ 0.15
NPHP4-211ENST00000622020 IGSF9Q9P2J2 1179 aa15.99■□□□□ 0.15
NPHP4-211ENST00000622020 SHROOM3Q8TF72 1996 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 YJEFN3A6XGL0 299 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 TIMM44O43615 452 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 DDHD2O94830 711 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 HOXA11P31270 313 aaPredicted RBP15.98■□□□□ 0.15
NPHP4-211ENST00000622020 TKTL1P51854 596 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 PRKAA1Q13131 559 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 LAMC2Q13753 1193 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 MYBPC3Q14896 1274 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 AGKQ53H12 422 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 ZYG11AQ6WRX3 759 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 DTNBP1Q96EV8 351 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 MRPS26Q9BYN8 205 aaKnown RBP15.98■□□□□ 0.15
NPHP4-211ENST00000622020 DDIT4Q9NX09 232 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.98■□□□□ 0.15
NPHP4-211ENST00000622020 ARHGEF37A1IGU5 675 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 H3BRB1 525 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 DFFAO00273 331 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 TMCC1O94876 653 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 CDK4P11802 303 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 RPS12P25398 132 aaKnown RBP15.98■□□□□ 0.15
NPHP4-211ENST00000622020 MAGEA12P43365 314 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 PSME3P61289 254 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 CSHL1Q14406 222 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 KRT80Q6KB66 452 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 RWDD4Q6NW29 188 aaKnown RBP15.98■□□□□ 0.15
NPHP4-211ENST00000622020 ESRP1Q6NXG1 681 aaKnown RBP15.98■□□□□ 0.15
NPHP4-211ENST00000622020 CNSTQ6PJW8 725 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 DEFB132Q7Z7B7 95 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 MFSD6LQ8IWD5 586 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 APPL2Q8NEU8 664 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 TUT1Q9H6E5 874 aaKnown RBP15.98■□□□□ 0.15
NPHP4-211ENST00000622020 RBPJLQ9UBG7 517 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 SFMBT1Q9UHJ3 866 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 RNF11Q9Y3C5 154 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 AP4S1Q9Y587 144 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 CROCCQ5TZA2 2017 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 DOCK1Q14185 1865 aa15.98■□□□□ 0.15
NPHP4-211ENST00000622020 FAM149AA5PLN7 773 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 TIPRLO75663 272 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 CNMDO75829 334 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 USP17L7P0C7H9 530 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 PIM1P11309 404 aaPredicted RBP15.97■□□□□ 0.15
NPHP4-211ENST00000622020 UGT1A6P19224 532 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 SOX4Q06945 474 aaPredicted RBP15.97■□□□□ 0.15
NPHP4-211ENST00000622020 NAB1Q13506 487 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 SEPT6Q14141 434 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 FAM187BQ17R55 369 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 LRRC8EQ6NSJ5 796 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 TMEM102Q8N9M5 508 aaPredicted RBP15.97■□□□□ 0.15
NPHP4-211ENST00000622020 KLHL23Q8NBE8 558 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 ADCY4Q8NFM4 1077 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 TSPAN14Q8NG11 270 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 ELMO2Q96JJ3 720 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 SLC45A3Q96JT2 553 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 POMKQ9H5K3 350 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 ACOT9Q9Y305 439 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 ACOT8O14734 319 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 DCLK1O15075 740 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 AP1G1O43747 822 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 BCAS2O75934 225 aaPredicted RBP15.97■□□□□ 0.15
NPHP4-211ENST00000622020 PGK1P00558 417 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 ADRA1BP35368 520 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 GRM5P41594 1212 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 ARHGAP1Q07960 439 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 NOMO2Q5JPE7 1267 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 ZNF410Q86VK4 478 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 OSTM1Q86WC4 334 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 TTC39CQ8N584 583 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 LPGAT1Q92604 370 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 HSPBAP1Q96EW2 488 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 RPL10LQ96L21 214 aaKnown RBP15.97■□□□□ 0.15
NPHP4-211ENST00000622020 MPHOSPH6Q99547 160 aaKnown RBP15.97■□□□□ 0.15
NPHP4-211ENST00000622020 C1QTNF1Q9BXJ1 281 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 ULBP1Q9BZM6 244 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 SPON1Q9HCB6 807 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 DNAAF2Q9NVR5 837 aaKnown RBP15.97■□□□□ 0.15
NPHP4-211ENST00000622020 NDUFA13Q9P0J0 144 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 ADAM28Q9UKQ2 775 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 CSADQ9Y600 493 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 TRMUO75648 421 aaKnown RBP15.97■□□□□ 0.15
NPHP4-211ENST00000622020 CYP2B6P20813 491 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 KCNA5P22460 613 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 SLC26A2P50443 739 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 HPCAP84074 193 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 DPYSQ14117 519 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 ARHGAP17Q68EM7 881 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 ARMCX2Q7L311 632 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 LCA5Q86VQ0 697 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 APOBEC3FQ8IUX4 373 aaKnown RBP15.97■□□□□ 0.15
NPHP4-211ENST00000622020 TXNDC5Q8NBS9 432 aaKnown RBP15.97■□□□□ 0.15
NPHP4-211ENST00000622020 B3GALNT2Q8NCR0 500 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 EXT2Q93063 718 aa15.97■□□□□ 0.15
NPHP4-211ENST00000622020 RNF34Q969K3 372 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms