RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 TNS4Q8IZW8 715 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 PYROXD2Q8N2H3 581 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 CXorf38Q8TB03 319 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 CERS2Q96G23 380 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 NDNQ99608 321 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 NMRAL1Q9HBL8 299 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 MID1IP1Q9NPA3 183 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 MAN1C1Q9NR34 630 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 TMPRSS4Q9NRS4 437 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 DUS2Q9NX74 493 aaKnown RBP9.35□□□□□ -0.91
GGA3-223ENST00000621870 SNX5Q9Y5X3 404 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 EIF4E1BA6NMX2 242 aaKnown RBP9.35□□□□□ -0.91
GGA3-223ENST00000621870 CCDC166P0CW27 439 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 CRABP2P29373 138 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 PEX19P40855 299 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 IFI35P80217 286 aaPredicted RBP9.35□□□□□ -0.91
GGA3-223ENST00000621870 CNTN1Q12860 1018 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 PWP1Q13610 501 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 UBXN2BQ14CS0 331 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 PFKFB4Q16877 469 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 AGKQ53H12 422 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 CRTC3Q6UUV7 619 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 ZNF438Q7Z4V0 828 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 MILR1Q7Z6M3 343 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 PATL1Q86TB9 770 aaKnown RBP9.35□□□□□ -0.91
GGA3-223ENST00000621870 CPA6Q8N4T0 437 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 OR14C36Q8NHC7 312 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 RHOBTB2Q9BYZ6 727 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 TNKS2Q9H2K2 1166 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 RHBGQ9H310 441 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 ANKZF1Q9H8Y5 726 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 PRDM16Q9HAZ2 1276 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 HMGXB4Q9UGU5 601 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 SUFUQ9UMX1 484 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 PCDHGC4Q9Y5F7 938 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 RAD54BQ9Y620 910 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 NUMA1Q14980 2115 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.35□□□□□ -0.91
GGA3-223ENST00000621870 A0A1B0GVM2 712 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 TCAF2A6NFQ2 919 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 MEI4A8MW99 385 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 M0R2N6 131 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 BANF1O75531 89 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 YBEYP58557 167 aaPredicted RBP9.35□□□□□ -0.91
GGA3-223ENST00000621870 SULT2A1Q06520 285 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 ACTN3Q08043 901 aaPredicted RBP9.35□□□□□ -0.91
GGA3-223ENST00000621870 TXNDC8Q6A555 127 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 METTL3Q86U44 580 aaKnown RBP9.35□□□□□ -0.91
GGA3-223ENST00000621870 SLC22A9Q8IVM8 553 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 SUGP1Q8IWZ8 645 aaKnown RBP9.35□□□□□ -0.91
GGA3-223ENST00000621870 ZCCHC9Q8N567 271 aaKnown RBP9.35□□□□□ -0.91
GGA3-223ENST00000621870 FUBP3Q96I24 572 aaKnown RBP eCLIP9.35□□□□□ -0.91
GGA3-223ENST00000621870 PLEKHA8Q96JA3 519 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 DACH2Q96NX9 599 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 CPNE1Q99829 537 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 ALG9Q9H6U8 611 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 GLOD4Q9HC38 313 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 OPTCQ9UBM4 332 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 ZNF510Q9Y2H8 683 aa9.35□□□□□ -0.91
GGA3-223ENST00000621870 DLG5Q8TDM6 1919 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 HNRNPCL2B2RXH8 293 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 E9PAM4 449 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 HNRNPCL1O60812 293 aaKnown RBP9.34□□□□□ -0.91
GGA3-223ENST00000621870 RASSF9O75901 435 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 CDK14O94921 469 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 ADRA1DP25100 572 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 COPAP53621 1224 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 ATXN1P54253 815 aaKnown RBP9.34□□□□□ -0.91
GGA3-223ENST00000621870 AUHQ13825 339 aaKnown RBP9.34□□□□□ -0.91
GGA3-223ENST00000621870 ATP6AP1LQ52LC2 224 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 CHST9Q7L1S5 443 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 ANKS1BQ7Z6G8 1248 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 EME1Q96AY2 570 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 FAM126AQ9BYI3 521 aaPredicted RBP9.34□□□□□ -0.91
GGA3-223ENST00000621870 PIF1Q9H611 641 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 AGO3Q9H9G7 860 aaKnown RBP9.34□□□□□ -0.91
GGA3-223ENST00000621870 ASXL3Q9C0F0 2248 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 MYH2Q9UKX2 1941 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 TRBV23OR9-2A0A075B6M9 112 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 SLC38A8A6NNN8 435 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 C9IYK1 514 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 NR5A2O00482 541 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 CES2O00748 559 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 FSCN2O14926 492 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 GRM6O15303 877 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 AVILO75366 819 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 FAM107AO95990 144 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 ABCB1P08183 1280 aaPredicted RBP9.34□□□□□ -0.91
GGA3-223ENST00000621870 RPS24P62847 133 aaKnown RBP9.34□□□□□ -0.91
GGA3-223ENST00000621870 CYP51A1Q16850 503 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 TEX44Q53QW1 395 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 ZC3H12BQ5HYM0 836 aaKnown RBP9.34□□□□□ -0.91
GGA3-223ENST00000621870 HGSNATQ68CP4 663 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 C10orf53Q8N6V4 93 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 CLEC4CQ8WTT0 213 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 ABHD8Q96I13 439 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 SOHLH2Q9NX45 425 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 AHSPQ9NZD4 102 aa9.34□□□□□ -0.91
GGA3-223ENST00000621870 STX18Q9P2W9 335 aaKnown RBP9.34□□□□□ -0.91
GGA3-223ENST00000621870 ASF1AQ9Y294 204 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms