RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 CRY1Q16526 586 aa23.04■■□□□ 1.28
CBWD3-213ENST00000618217 DRICH1Q6PGQ1 229 aaPredicted RBP23.04■■□□□ 1.28
CBWD3-213ENST00000618217 Q6ZVU0 165 aa23.04■■□□□ 1.28
CBWD3-213ENST00000618217 OR2A12Q8NGT7 310 aa23.04■■□□□ 1.28
CBWD3-213ENST00000618217 VOPP1Q96AW1 172 aa23.04■■□□□ 1.28
CBWD3-213ENST00000618217 CAPZA3Q96KX2 299 aa23.04■■□□□ 1.28
CBWD3-213ENST00000618217 TNKS2Q9H2K2 1166 aa23.04■■□□□ 1.28
CBWD3-213ENST00000618217 RNF14Q9UBS8 474 aa23.04■■□□□ 1.28
CBWD3-213ENST00000618217 SEPT3Q9UH03 358 aa23.04■■□□□ 1.28
CBWD3-213ENST00000618217 SLC8A2Q9UPR5 921 aa23.04■■□□□ 1.28
CBWD3-213ENST00000618217 SIN3BO75182 1162 aa23.04■■□□□ 1.28
CBWD3-213ENST00000618217 JCHAINP01591 159 aa23.04■■□□□ 1.28
CBWD3-213ENST00000618217 RBL1P28749 1068 aa23.04■■□□□ 1.28
CBWD3-213ENST00000618217 MMP13P45452 471 aa23.04■■□□□ 1.28
CBWD3-213ENST00000618217 ZBTB17Q13105 803 aa23.04■■□□□ 1.28
CBWD3-213ENST00000618217 FAM182AQ5T1J6 154 aa23.04■■□□□ 1.28
CBWD3-213ENST00000618217 CDKL3Q8IVW4 592 aaPredicted RBP23.04■■□□□ 1.28
CBWD3-213ENST00000618217 CNTD1Q8N815 330 aa23.04■■□□□ 1.28
CBWD3-213ENST00000618217 HTR3CQ8WXA8 447 aa23.04■■□□□ 1.28
CBWD3-213ENST00000618217 AP1M1Q9BXS5 423 aa23.04■■□□□ 1.28
CBWD3-213ENST00000618217 MTSS1O43312 755 aa23.03■■□□□ 1.28
CBWD3-213ENST00000618217 C7P10643 843 aa23.03■■□□□ 1.28
CBWD3-213ENST00000618217 RGRP47804 291 aa23.03■■□□□ 1.28
CBWD3-213ENST00000618217 BYSLQ13895 437 aaKnown RBP23.03■■□□□ 1.28
CBWD3-213ENST00000618217 CYP1B1Q16678 543 aa23.03■■□□□ 1.28
CBWD3-213ENST00000618217 DARS2Q6PI48 645 aaKnown RBP23.03■■□□□ 1.28
CBWD3-213ENST00000618217 NSMCE1Q8WV22 266 aa23.03■■□□□ 1.28
CBWD3-213ENST00000618217 FAM129BQ96TA1 746 aa23.03■■□□□ 1.28
CBWD3-213ENST00000618217 HOMER3Q9NSC5 361 aa23.03■■□□□ 1.28
CBWD3-213ENST00000618217 RBM22Q9NW64 420 aaKnown RBP eCLIP23.03■■□□□ 1.28
CBWD3-213ENST00000618217 AMACRQ9UHK6 382 aa23.03■■□□□ 1.28
CBWD3-213ENST00000618217 FAM86C2PA6NEL3 165 aa23.02■■□□□ 1.28
CBWD3-213ENST00000618217 GPR37L1O60883 481 aa23.02■■□□□ 1.28
CBWD3-213ENST00000618217 GSRP00390 522 aa23.02■■□□□ 1.28
CBWD3-213ENST00000618217 PTPN3P26045 913 aa23.02■■□□□ 1.28
CBWD3-213ENST00000618217 RHOAP61586 193 aa23.02■■□□□ 1.28
CBWD3-213ENST00000618217 NSUN2Q08J23 767 aaKnown RBP eCLIP23.02■■□□□ 1.28
CBWD3-213ENST00000618217 SNX1Q13596 522 aa23.02■■□□□ 1.28
CBWD3-213ENST00000618217 CARD16Q5EG05 197 aa23.02■■□□□ 1.28
CBWD3-213ENST00000618217 ATXN7L2Q5T6C5 722 aaPredicted RBP23.02■■□□□ 1.28
CBWD3-213ENST00000618217 DPY19L3Q6ZPD9 716 aa23.02■■□□□ 1.28
CBWD3-213ENST00000618217 OR2AP1Q8NGE2 309 aa23.02■■□□□ 1.28
CBWD3-213ENST00000618217 ZNF592Q92610 1267 aa23.02■■□□□ 1.28
CBWD3-213ENST00000618217 MGME1Q9BQP7 344 aa23.02■■□□□ 1.28
CBWD3-213ENST00000618217 CINPQ9BW66 212 aaPredicted RBP23.02■■□□□ 1.28
CBWD3-213ENST00000618217 TM6SF2Q9BZW4 377 aa23.02■■□□□ 1.28
CBWD3-213ENST00000618217 ATP8A1Q9Y2Q0 1164 aa23.02■■□□□ 1.28
CBWD3-213ENST00000618217 CR2P20023 1033 aa23.01■■□□□ 1.27
CBWD3-213ENST00000618217 HSPA9P38646 679 aaKnown RBP23.01■■□□□ 1.27
CBWD3-213ENST00000618217 CSNK1DP48730 415 aa23.01■■□□□ 1.27
CBWD3-213ENST00000618217 TEX44Q53QW1 395 aa23.01■■□□□ 1.27
CBWD3-213ENST00000618217 HEATR6Q6AI08 1181 aaKnown RBP23.01■■□□□ 1.27
CBWD3-213ENST00000618217 ALG1LQ6GMV1 187 aa23.01■■□□□ 1.27
CBWD3-213ENST00000618217 C12orf50Q8NA57 414 aaPredicted RBP23.01■■□□□ 1.27
CBWD3-213ENST00000618217 TMEM121Q9BTD3 319 aa23.01■■□□□ 1.27
CBWD3-213ENST00000618217 NT5MQ9NPB1 228 aa23.01■■□□□ 1.27
CBWD3-213ENST00000618217 DRG1Q9Y295 367 aaKnown RBP23.01■■□□□ 1.27
CBWD3-213ENST00000618217 KMT2EQ8IZD2 1858 aa23.01■■□□□ 1.27
CBWD3-213ENST00000618217 RNF103O00237 685 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 KRIT1O00522 736 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 SYNCRIPO60506 623 aaKnown RBP23■■□□□ 1.27
CBWD3-213ENST00000618217 HLA-DQB2P05538 268 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 ITGAVP06756 1048 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 DGKEP52429 567 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 NRLP54845 237 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 SNRPD1P62314 119 aaKnown RBP23■■□□□ 1.27
CBWD3-213ENST00000618217 ELAVL3Q14576 367 aaKnown RBP23■■□□□ 1.27
CBWD3-213ENST00000618217 ZNF235Q14590 738 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 STARD3Q14849 445 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 STK40Q8N2I9 435 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 CHST14Q8NCH0 376 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 KIF18AQ8NI77 898 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 ERLEC1Q96DZ1 483 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 EXOC2Q96KP1 924 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 TEKT5Q96M29 485 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 NSMCE3Q96MG7 304 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 CEP41Q9BYV8 373 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 SEPT10Q9P0V9 454 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 KCNN4O15554 427 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 GJB3O75712 270 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 PAPSS2O95340 614 aaPredicted RBP23■■□□□ 1.27
CBWD3-213ENST00000618217 CCNHP51946 323 aaPredicted RBP23■■□□□ 1.27
CBWD3-213ENST00000618217 COPAP53621 1224 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 SATB1Q01826 763 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 MYLK3Q32MK0 819 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 BBS5Q8N3I7 341 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 RTP4Q96DX8 246 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 GDAP1L1Q96MZ0 367 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 VAT1Q99536 393 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 RSPH9Q9H1X1 276 aaPredicted RBP23■■□□□ 1.27
CBWD3-213ENST00000618217 CDC23Q9UJX2 597 aa23■■□□□ 1.27
CBWD3-213ENST00000618217 ANKRD36A6QL64 1941 aa22.99■■□□□ 1.27
CBWD3-213ENST00000618217 ALOX15BO15296 676 aa22.99■■□□□ 1.27
CBWD3-213ENST00000618217 ZNF189O75820 626 aaPredicted RBP22.99■■□□□ 1.27
CBWD3-213ENST00000618217 URI1O94763 535 aaPredicted RBP22.99■■□□□ 1.27
CBWD3-213ENST00000618217 AVPR2P30518 371 aa22.99■■□□□ 1.27
CBWD3-213ENST00000618217 GDF10P55107 478 aa22.99■■□□□ 1.27
CBWD3-213ENST00000618217 MAXP61244 160 aa22.99■■□□□ 1.27
CBWD3-213ENST00000618217 IHHQ14623 411 aa22.99■■□□□ 1.27
CBWD3-213ENST00000618217 TTC27Q6P3X3 843 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms