RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 METTL21CQ5VZV1 264 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 VN1R5Q7Z5H4 357 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 SLC44A1Q8WWI5 657 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 CLPTM1LQ96KA5 538 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 SYT15Q9BQS2 421 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 SNX15Q9NRS6 342 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 GTF2A1LQ9UNN4 478 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 LMTK2Q8IWU2 1503 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 AVILO75366 819 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 STAU1O95793 577 aaKnown RBP10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 MYCP01106 439 aaPredicted RBP10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 VTNP04004 478 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 CYP2A7P20853 494 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 SHMT1P34896 483 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 GPR15P49685 360 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 TAS2R40P59535 323 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 CSNK2BP67870 215 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 MTX3Q5HYI7 312 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 PACS1Q6VY07 963 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 MACC1Q6ZN28 852 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 NT5DC4Q86YG4 428 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 OFCC1Q8IZS5 231 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 KCTD4Q8WVF5 259 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 ZBTB45Q96K62 511 aaPredicted RBP10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 OSBPL6Q9BZF3 934 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 NOL11Q9H8H0 719 aaKnown RBP10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 LNPEPQ9UIQ6 1025 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 IKZF3Q9UKT9 509 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 ING4Q9UNL4 249 aa10.78□□□□□ -0.68
CLTCL1-209ENST00000617103 CEP170BQ9Y4F5 1589 aaPredicted RBP10.77□□□□□ -0.68
CLTCL1-209ENST00000617103 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.77□□□□□ -0.68
CLTCL1-209ENST00000617103 NPM3O75607 178 aaKnown RBP10.77□□□□□ -0.68
CLTCL1-209ENST00000617103 ADRB2P07550 413 aa10.77□□□□□ -0.68
CLTCL1-209ENST00000617103 TFEBP19484 476 aa10.77□□□□□ -0.68
CLTCL1-209ENST00000617103 IFNGR2P38484 337 aa10.77□□□□□ -0.68
CLTCL1-209ENST00000617103 RAB10P61026 200 aa10.77□□□□□ -0.68
CLTCL1-209ENST00000617103 ACSM2AQ08AH3 577 aa10.77□□□□□ -0.68
CLTCL1-209ENST00000617103 FCHO2Q0JRZ9 810 aa10.77□□□□□ -0.68
CLTCL1-209ENST00000617103 BMT2Q1RMZ1 405 aa10.77□□□□□ -0.68
CLTCL1-209ENST00000617103 ACSM2BQ68CK6 577 aa10.77□□□□□ -0.68
CLTCL1-209ENST00000617103 METTL7BQ6UX53 244 aa10.77□□□□□ -0.68
CLTCL1-209ENST00000617103 ZNF614Q8N883 585 aa10.77□□□□□ -0.68
CLTCL1-209ENST00000617103 ZNF180Q9UJW8 692 aa10.77□□□□□ -0.68
CLTCL1-209ENST00000617103 ERGIC3Q9Y282 383 aa10.77□□□□□ -0.68
CLTCL1-209ENST00000617103 SPACA6W5XKT8 324 aa10.77□□□□□ -0.68
CLTCL1-209ENST00000617103 TMEM150BA6NC51 233 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 CBX4O00257 560 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 TSPAN3O60637 253 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 ENDOD1O94919 500 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 RTN3O95197 1032 aaPredicted RBP10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 MLYCDO95822 493 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 CALCAP01258 141 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 CDK9P50750 372 aaKnown RBP10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 RPL7AP62424 266 aaKnown RBP10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 SYT12Q8IV01 421 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 NKAPQ8N5F7 415 aaKnown RBP10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 LRRC17Q8N6Y2 441 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 CIB1Q99828 191 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 OMDQ99983 421 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 CLN6Q9NWW5 311 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 XPR1Q9UBH6 696 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 CIDEBQ9UHD4 219 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 LGALS13Q9UHV8 139 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 VPS28Q9UK41 221 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 TBC1D30Q9Y2I9 924 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 ABCA9Q8IUA7 1624 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 FRMPD1Q5SYB0 1578 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 C5orf60A6NFR6 353 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 LSM1O15116 133 aaKnown RBP10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 NRP2O60462 931 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 THP07101 528 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 ITGB6P18564 788 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 CRHR1P34998 444 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 RFX3P48380 749 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 ZCCHC8Q6NZY4 707 aaKnown RBP10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 HERC6Q8IVU3 1022 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 MAB21L3Q8N8X9 362 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 LEMD2Q8NC56 503 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 MCOLN3Q8TDD5 553 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 SPOCK2Q92563 424 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 BHMTQ93088 406 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 HOPXQ9BPY8 73 aaPredicted RBP10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 ZNF670Q9BS34 389 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 SNRNP25Q9BV90 132 aaKnown RBP10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 DEFB129Q9H1M3 183 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 DDX43Q9NXZ2 648 aaKnown RBP10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 EGFL7Q9UHF1 273 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 USP20Q9Y2K6 914 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 CHD1O14646 1710 aa10.77□□□□□ -0.69
CLTCL1-209ENST00000617103 DDTLA6NHG4 134 aaPredicted RBP10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 TIPRLO75663 272 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 KLHL18O94889 574 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 FMO4P31512 558 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 MSX2P35548 267 aaPredicted RBP10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 NFE2Q16621 373 aaPredicted RBP10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 ZNF772Q68DY9 489 aaPredicted RBP10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 ZNF549Q6P9A3 640 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 RNF19BQ6ZMZ0 732 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 PAGE2Q7Z2X7 111 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 TFAP2DQ7Z6R9 452 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms