RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 MATN3O15232 486 aa16.67■□□□□ 0.26
SPTSSB-204ENST00000617024 CEP104O60308 925 aa16.67■□□□□ 0.26
SPTSSB-204ENST00000617024 SIN3BO75182 1162 aa16.67■□□□□ 0.26
SPTSSB-204ENST00000617024 TMCC1O94876 653 aa16.67■□□□□ 0.26
SPTSSB-204ENST00000617024 PAPSS2O95340 614 aaPredicted RBP16.67■□□□□ 0.26
SPTSSB-204ENST00000617024 ATP1A1P05023 1023 aaKnown RBP16.67■□□□□ 0.26
SPTSSB-204ENST00000617024 CXCR5P32302 372 aa16.67■□□□□ 0.26
SPTSSB-204ENST00000617024 RECQLP46063 649 aaPredicted RBP16.67■□□□□ 0.26
SPTSSB-204ENST00000617024 CYTH1Q15438 398 aa16.67■□□□□ 0.26
SPTSSB-204ENST00000617024 C9orf64Q5T6V5 341 aa16.67■□□□□ 0.26
SPTSSB-204ENST00000617024 TMCO4Q5TGY1 634 aa16.67■□□□□ 0.26
SPTSSB-204ENST00000617024 KIAA1211LQ6NV74 962 aa16.67■□□□□ 0.26
SPTSSB-204ENST00000617024 ZC3H14Q6PJT7 736 aaKnown RBP16.67■□□□□ 0.26
SPTSSB-204ENST00000617024 PCDH20Q8N6Y1 951 aaKnown RBP16.67■□□□□ 0.26
SPTSSB-204ENST00000617024 TTC13Q8NBP0 860 aa16.67■□□□□ 0.26
SPTSSB-204ENST00000617024 TSTD1Q8NFU3 115 aa16.67■□□□□ 0.26
SPTSSB-204ENST00000617024 HDAC11Q96DB2 347 aa16.67■□□□□ 0.26
SPTSSB-204ENST00000617024 CCDC114Q96M63 670 aa16.67■□□□□ 0.26
SPTSSB-204ENST00000617024 HERPUD2Q9BSE4 406 aa16.67■□□□□ 0.26
SPTSSB-204ENST00000617024 FBRSQ9HAH7 460 aa16.67■□□□□ 0.26
SPTSSB-204ENST00000617024 TCRBV21S2A2A0A5A6 115 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 BNIP3LO60238 219 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 APBB3O95704 486 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 VAV1P15498 845 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 PECAM1P16284 738 aaPredicted RBP16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 RENBPP51606 427 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 SNRPD1P62314 119 aaKnown RBP16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 CSTF1Q05048 431 aaKnown RBP16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 ZNF33AQ06730 810 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 PPIDQ08752 370 aaKnown RBP16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 AP1B1Q10567 949 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 LBRQ14739 615 aaKnown RBP16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 CARD16Q5EG05 197 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 MARC1Q5VT66 337 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 C22orf39Q6P5X5 142 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 Q6ZVU0 165 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 SLC13A5Q86YT5 568 aaPredicted RBP16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 PLPP6Q8IY26 295 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 CCDC13Q8IYE1 715 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 STK40Q8N2I9 435 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 PGBD3Q8N328 593 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 BBS5Q8N3I7 341 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 OR2T3Q8NH03 318 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 LRRN4Q8WUT4 740 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 TFB1MQ8WVM0 346 aaKnown RBP16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 FATE1Q969F0 183 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 HAUS1Q96CS2 278 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 OLFM3Q96PB7 478 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 HHIPQ96QV1 700 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 WDR24Q96S15 920 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 LGMNQ99538 433 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 TNKS2Q9H2K2 1166 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 NYNRINQ9P2P1 1898 aaKnown RBP16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 FBXO4Q9UKT5 387 aa16.66■□□□□ 0.26
SPTSSB-204ENST00000617024 CTAGE9A4FU28 777 aa16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 HACD1B0YJ81 288 aa16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 K7ESF4 209 aa16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 RNASEH1O60930 286 aaKnown RBP16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 ZNF821O75541 412 aaPredicted RBP16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 NEBLO76041 1014 aa16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 RHOAP61586 193 aa16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 OTUD4Q01804 1114 aaKnown RBP16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 SLC10A7Q0GE19 358 aa16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 XRCC4Q13426 336 aa16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 HNRNPDQ14103 355 aaKnown RBP16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 ZC3H18Q86VM9 953 aaKnown RBP16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 TMPRSS6Q8IU80 811 aa16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 OR2A12Q8NGT7 310 aa16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 ACTL9Q8TC94 416 aa16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 MAIP1Q8WWC4 291 aa16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 OR8D1Q8WZ84 308 aa16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 FAM129BQ96TA1 746 aa16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 NAPGQ99747 312 aaPredicted RBP16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 CINPQ9BW66 212 aaPredicted RBP16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 CD248Q9HCU0 757 aa16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 PRMT8Q9NR22 394 aaPredicted RBP16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 BCCIPQ9P287 314 aaKnown RBP eCLIP16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 SEPT3Q9UH03 358 aa16.65■□□□□ 0.26
SPTSSB-204ENST00000617024 H7C0C1 242 aa16.64■□□□□ 0.25
SPTSSB-204ENST00000617024 MCF2LO15068 1137 aa16.64■□□□□ 0.25
SPTSSB-204ENST00000617024 POP4O95707 220 aaKnown RBP16.64■□□□□ 0.25
SPTSSB-204ENST00000617024 PEX11BO96011 259 aa16.64■□□□□ 0.25
SPTSSB-204ENST00000617024 GSRP00390 522 aa16.64■□□□□ 0.25
SPTSSB-204ENST00000617024 CCNB1P14635 433 aa16.64■□□□□ 0.25
SPTSSB-204ENST00000617024 HOXA6P31267 233 aa16.64■□□□□ 0.25
SPTSSB-204ENST00000617024 ATP5OP48047 213 aa16.64■□□□□ 0.25
SPTSSB-204ENST00000617024 COPAP53621 1224 aa16.64■□□□□ 0.25
SPTSSB-204ENST00000617024 NRLP54845 237 aa16.64■□□□□ 0.25
SPTSSB-204ENST00000617024 NSUN2Q08J23 767 aaKnown RBP eCLIP16.64■□□□□ 0.25
SPTSSB-204ENST00000617024 KLF1Q13351 362 aaPredicted RBP16.64■□□□□ 0.25
SPTSSB-204ENST00000617024 ELAVL3Q14576 367 aaKnown RBP16.64■□□□□ 0.25
SPTSSB-204ENST00000617024 NOMO1Q15155 1222 aa16.64■□□□□ 0.25
SPTSSB-204ENST00000617024 MYLK3Q32MK0 819 aa16.64■□□□□ 0.25
SPTSSB-204ENST00000617024 B4GALNT4Q76KP1 1039 aa16.64■□□□□ 0.25
SPTSSB-204ENST00000617024 DSG4Q86SJ6 1040 aa16.64■□□□□ 0.25
SPTSSB-204ENST00000617024 RYBPQ8N488 228 aaPredicted RBP16.64■□□□□ 0.25
SPTSSB-204ENST00000617024 TEX26Q8N6G2 289 aa16.64■□□□□ 0.25
SPTSSB-204ENST00000617024 HMGB4Q8WW32 186 aa16.64■□□□□ 0.25
SPTSSB-204ENST00000617024 MAML1Q92585 1016 aa16.64■□□□□ 0.25
SPTSSB-204ENST00000617024 OSBPL9Q96SU4 736 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms