RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 FAM133BQ5BKY9 247 aaKnown RBP18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 FSCBQ5H9T9 825 aa18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 PITRM1Q5JRX3 1037 aa18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 BSPRYQ5W0U4 402 aa18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 PIAS4Q8N2W9 510 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 UBR7Q8N806 425 aa18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 LMO3Q8TAP4 145 aa18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 PTPRN2Q92932 1015 aa18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 FAM131CQ96AQ9 280 aa18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 PRICKLE1Q96MT3 831 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 ARHGAP9Q9BRR9 750 aa18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 KDM4CQ9H3R0 1056 aa18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 NLGN3Q9NZ94 848 aa18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 ENTPD2Q9Y5L3 495 aa18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 FLNCQ14315 2725 aa18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 DOPEY2Q9Y3R5 2298 aa18.04■□□□□ 0.48
TRAPPC3-209ENST00000616395 USP27XA6NNY8 438 aa18.04■□□□□ 0.48
TRAPPC3-209ENST00000616395 TULP2O00295 520 aa18.04■□□□□ 0.48
TRAPPC3-209ENST00000616395 IRAK2O43187 625 aa18.04■□□□□ 0.48
TRAPPC3-209ENST00000616395 PLRG1O43660 514 aaKnown RBP18.04■□□□□ 0.48
TRAPPC3-209ENST00000616395 DUSP3P51452 185 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC3-209ENST00000616395 APBA1Q02410 837 aa18.04■□□□□ 0.48
TRAPPC3-209ENST00000616395 SLC18A3Q16572 532 aa18.04■□□□□ 0.48
TRAPPC3-209ENST00000616395 CCDC122Q5T0U0 273 aa18.04■□□□□ 0.48
TRAPPC3-209ENST00000616395 XKR5Q6UX68 686 aa18.04■□□□□ 0.48
TRAPPC3-209ENST00000616395 TRIM69Q86WT6 500 aa18.04■□□□□ 0.48
TRAPPC3-209ENST00000616395 CARNMT1Q8N4J0 409 aa18.04■□□□□ 0.48
TRAPPC3-209ENST00000616395 EXTL1Q92935 676 aa18.04■□□□□ 0.48
TRAPPC3-209ENST00000616395 MYEOVQ96EZ4 313 aa18.04■□□□□ 0.48
TRAPPC3-209ENST00000616395 FAXDC2Q96IV6 333 aa18.04■□□□□ 0.48
TRAPPC3-209ENST00000616395 RPL10LQ96L21 214 aaKnown RBP18.04■□□□□ 0.48
TRAPPC3-209ENST00000616395 MYOCQ99972 504 aa18.04■□□□□ 0.48
TRAPPC3-209ENST00000616395 IRX2Q9BZI1 471 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC3-209ENST00000616395 DNAI2Q9GZS0 605 aa18.04■□□□□ 0.48
TRAPPC3-209ENST00000616395 LZTFL1Q9NQ48 299 aa18.04■□□□□ 0.48
TRAPPC3-209ENST00000616395 K7ESM1 405 aa18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 FAM87AP0C7U9 286 aa18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 VAV1P15498 845 aa18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 TNFAIP3P21580 790 aa18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 USP8P40818 1118 aa18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 SLC11A2P49281 568 aa18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 RPS24P62847 133 aaKnown RBP18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 ECT2LQ008S8 904 aa18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 TUBB2AQ13885 445 aa18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 UBAP2LQ14157 1087 aaKnown RBP18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 ELAVL3Q14576 367 aaKnown RBP18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 SETMARQ53H47 684 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 PPP1R2P3Q6NXS1 205 aa18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 CLEC14AQ86T13 490 aa18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 ARL14Q8N4G2 192 aa18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 HJURPQ8NCD3 748 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 ACRBPQ8NEB7 543 aa18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 GRAMD1AQ96CP6 724 aa18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 ALS2CR12Q96Q35 445 aa18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 TUBB2BQ9BVA1 445 aa18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 USP29Q9HBJ7 922 aa18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 ATXN7L1Q9ULK2 861 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 CEP83Q9Y592 693 aa18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 PCDHA13Q9Y5I0 950 aa18.03■□□□□ 0.48
TRAPPC3-209ENST00000616395 YJEFN3A6XGL0 299 aa18.02■□□□□ 0.48
TRAPPC3-209ENST00000616395 E7ENQ6 273 aa18.02■□□□□ 0.48
TRAPPC3-209ENST00000616395 SLC7A4O43246 635 aa18.02■□□□□ 0.48
TRAPPC3-209ENST00000616395 ACSL4O60488 711 aa18.02■□□□□ 0.48
TRAPPC3-209ENST00000616395 TNFSF15O95150 251 aa18.02■□□□□ 0.48
TRAPPC3-209ENST00000616395 IGLV3-27P01718 113 aa18.02■□□□□ 0.48
TRAPPC3-209ENST00000616395 CD19P15391 556 aa18.02■□□□□ 0.48
TRAPPC3-209ENST00000616395 STK19P49842 368 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC3-209ENST00000616395 CDH18Q13634 790 aa18.02■□□□□ 0.48
TRAPPC3-209ENST00000616395 GOLGA7BQ2TAP0 167 aa18.02■□□□□ 0.48
TRAPPC3-209ENST00000616395 RNF219Q5W0B1 726 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC3-209ENST00000616395 HGSNATQ68CP4 663 aa18.02■□□□□ 0.48
TRAPPC3-209ENST00000616395 NADSYN1Q6IA69 706 aa18.02■□□□□ 0.48
TRAPPC3-209ENST00000616395 USP53Q70EK8 1073 aa18.02■□□□□ 0.48
TRAPPC3-209ENST00000616395 IRF2BP2Q7Z5L9 587 aa18.02■□□□□ 0.48
TRAPPC3-209ENST00000616395 ANKRD52Q8NB46 1076 aa18.02■□□□□ 0.48
TRAPPC3-209ENST00000616395 TMEM145Q8NBT3 493 aa18.02■□□□□ 0.48
TRAPPC3-209ENST00000616395 ARRDC3Q96B67 414 aa18.02■□□□□ 0.48
TRAPPC3-209ENST00000616395 CALR3Q96L12 384 aaKnown RBP18.02■□□□□ 0.48
TRAPPC3-209ENST00000616395 CALN1Q9BXU9 219 aa18.02■□□□□ 0.48
TRAPPC3-209ENST00000616395 EVA1BQ9NVM1 165 aa18.02■□□□□ 0.48
TRAPPC3-209ENST00000616395 COL27A1Q8IZC6 1860 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC3-209ENST00000616395 SCAMP1O15126 338 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 SLC31A1O15431 190 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 NEBLO76041 1014 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 PRLRP16471 622 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 SLC8A3P57103 927 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 TLE1Q04724 770 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 ADIGQ0VDE8 80 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 CDKN3Q16667 212 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 ZNF542PQ5EBM4 170 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 AGBL4Q5VU57 503 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 ARHGAP17Q68EM7 881 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 DPY19L2P1Q6NXN4 242 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 GJB7Q6PEY0 223 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 TMEM270Q6UE05 265 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 SYT10Q6XYQ8 523 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 RBM44Q6ZP01 1051 aaKnown RBP18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 APCDD1Q8J025 514 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 CFAP52Q8N1V2 620 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 TTC39CQ8N584 583 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms