RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 ELFN1P0C7U0 828 aa9.56□□□□□ -0.88
CLTCL1-208ENST00000615606 H2AFXP16104 143 aaPredicted RBP9.56□□□□□ -0.88
CLTCL1-208ENST00000615606 GPC1P35052 558 aa9.56□□□□□ -0.88
CLTCL1-208ENST00000615606 GJA5P36382 358 aa9.56□□□□□ -0.88
CLTCL1-208ENST00000615606 SCNN1AP37088 669 aa9.56□□□□□ -0.88
CLTCL1-208ENST00000615606 SLC11A1P49279 550 aa9.56□□□□□ -0.88
CLTCL1-208ENST00000615606 DRG2P55039 364 aaKnown RBP9.56□□□□□ -0.88
CLTCL1-208ENST00000615606 SKP1P63208 163 aa9.56□□□□□ -0.88
CLTCL1-208ENST00000615606 PTP4A2Q12974 167 aa9.56□□□□□ -0.88
CLTCL1-208ENST00000615606 CYP2A13Q16696 494 aa9.56□□□□□ -0.88
CLTCL1-208ENST00000615606 TEX44Q53QW1 395 aa9.56□□□□□ -0.88
CLTCL1-208ENST00000615606 STXBP5Q5T5C0 1151 aa9.56□□□□□ -0.88
CLTCL1-208ENST00000615606 PIP4K2CQ8TBX8 421 aa9.56□□□□□ -0.88
CLTCL1-208ENST00000615606 ELMO1Q92556 727 aa9.56□□□□□ -0.88
CLTCL1-208ENST00000615606 KLHL5Q96PQ7 755 aa9.56□□□□□ -0.88
CLTCL1-208ENST00000615606 ASB2Q96Q27 587 aa9.56□□□□□ -0.88
CLTCL1-208ENST00000615606 ACOX2Q99424 681 aa9.56□□□□□ -0.88
CLTCL1-208ENST00000615606 MRPL46Q9H2W6 279 aaKnown RBP9.56□□□□□ -0.88
CLTCL1-208ENST00000615606 RAB21Q9UL25 225 aa9.56□□□□□ -0.88
CLTCL1-208ENST00000615606 TMCO1Q9UM00 188 aa9.56□□□□□ -0.88
CLTCL1-208ENST00000615606 DNAJC16Q9Y2G8 782 aa9.56□□□□□ -0.88
CLTCL1-208ENST00000615606 GNG14A0A1W2PPG7 69 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 C2CD4BA6NLJ0 364 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 PRNPP04156 253 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 SERPINE1P05121 402 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 DDX6P26196 483 aaKnown RBP eCLIP9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 PBX3P40426 434 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 GNA12Q03113 381 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 SLC20A2Q08357 652 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 ELP6Q0PNE2 266 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 IFNEQ86WN2 208 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 ATL1Q8WXF7 558 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 ING2Q9H160 280 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 HECAQ9UBI9 543 aaPredicted RBP9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 AURKCQ9UQB9 309 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 TBC1D30Q9Y2I9 924 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 TNPO3Q9Y5L0 923 aaKnown RBP9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 STYXL1Q9Y6J8 313 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 TMEM114B3SHH9 223 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 RNF225M0QZC1 329 aaPredicted RBP9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 PSMD12O00232 456 aaPredicted RBP9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 PEX5P50542 639 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 RFWD3Q6PCD5 774 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 TRPM8Q7Z2W7 1104 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 DNAJB7Q7Z6W7 309 aaPredicted RBP9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 GPSM1Q86YR5 675 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 TIFAQ96CG3 184 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 PHF21BQ96EK2 531 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 TLR9Q9NR96 1032 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 POLG2Q9UHN1 485 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 ARHGAP26Q9UNA1 814 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 CHD4Q14839 1912 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 DNAJC25-GNG10A0A024R161 153 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 CACNB4O00305 520 aaPredicted RBP9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 MAGEC1O60732 1142 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 RGS20O76081 388 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 CCNCP24863 283 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 NDST2P52849 883 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 SKOR1P84550 965 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 CAP1Q01518 475 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 FAAP100Q0VG06 881 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 MAD2L1Q13257 205 aaPredicted RBP9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 CLEC20AQ6ZU45 233 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 HDAC7Q8WUI4 952 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 ALG3Q92685 438 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 USP6NLQ92738 828 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 FAM162AQ96A26 154 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 HHIPL1Q96JK4 782 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 MS4A4AQ96JQ5 239 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 SIX2Q9NPC8 291 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 ITM2BQ9Y287 266 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 MYH3P11055 1940 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 MEI4A8MW99 385 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 ENPP3O14638 875 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 BAIAP3O94812 1187 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 OVGP1Q12889 678 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 AUHQ13825 339 aaKnown RBP9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 NR6A1Q15406 480 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 SLC39A4Q6P5W5 647 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 MARK2Q7KZI7 788 aaKnown RBP9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 RAD9AQ99638 391 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 EBNA1BP2Q99848 306 aaKnown RBP9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 MIR1-1HGQ9H1L0 117 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 ELAC1Q9H777 363 aaKnown RBP9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 AGO3Q9H9G7 860 aaKnown RBP9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 ARL15Q9NXU5 204 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 GGT7Q9UJ14 662 aa9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 REXO2Q9Y3B8 237 aaKnown RBP9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 ZFP37Q9Y6Q3 630 aaPredicted RBP9.55□□□□□ -0.88
CLTCL1-208ENST00000615606 BUD23O43709 281 aaKnown RBP9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 LRIG2O94898 1065 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 FKBP9O95302 570 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 CTPS1P17812 591 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 PRIM2P49643 509 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 IRAK1P51617 712 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 KYAT3Q6YP21 454 aaKnown RBP9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 FKBP9P1Q75LS8 142 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 LRRC34Q8IZ02 419 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 CATSPER1Q8NEC5 780 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 STAG3L4Q8TBR4 150 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms