RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 DHRSXQ8N5I4 330 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 ACMSDQ8TDX5 336 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 CCDC97Q96F63 343 aaPredicted RBP11.94□□□□□ -0.5
CDH5-208ENST00000614547 FBXL20Q96IG2 436 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 KCTD15Q96SI1 283 aaPredicted RBP11.94□□□□□ -0.5
CDH5-208ENST00000614547 SORT1Q99523 831 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 GPATCH1Q9BRR8 931 aaKnown RBP11.94□□□□□ -0.5
CDH5-208ENST00000614547 TRIM15Q9C019 465 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 DNAI2Q9GZS0 605 aa11.94□□□□□ -0.5
CDH5-208ENST00000614547 DHX33Q9H6R0 707 aaKnown RBP11.94□□□□□ -0.5
CDH5-208ENST00000614547 COPG1Q9Y678 874 aaKnown RBP11.94□□□□□ -0.5
CDH5-208ENST00000614547 TRPC5OSA6NMA1 111 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 TMX2-CTNND1H3BSU7 103 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 JUNP05412 331 aaKnown RBP11.93□□□□□ -0.5
CDH5-208ENST00000614547 ZNF182P17025 639 aaPredicted RBP11.93□□□□□ -0.5
CDH5-208ENST00000614547 NFKB1P19838 968 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 PTPN7P35236 360 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 GPD2P43304 727 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 RAD23AP54725 363 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 ITGA7Q13683 1181 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 MXD4Q14582 209 aaPredicted RBP11.93□□□□□ -0.5
CDH5-208ENST00000614547 LDB1Q86U70 411 aaPredicted RBP11.93□□□□□ -0.5
CDH5-208ENST00000614547 RNF139Q8WU17 664 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 DLG3Q92796 817 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 HPS1Q92902 700 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 C2orf40Q9H1Z8 148 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 CDHR5Q9HBB8 845 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 AS3MTQ9HBK9 375 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 MRPL40Q9NQ50 206 aaKnown RBP11.93□□□□□ -0.5
CDH5-208ENST00000614547 DDIT4Q9NX09 232 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 SNX10Q9Y5X0 201 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 M0R3G1 203 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 TNFAIP1Q13829 316 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 MFSD4BQ5TF39 518 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 NIPA2Q8N8Q9 360 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 ZBTB8BQ8NAP8 495 aaPredicted RBP11.93□□□□□ -0.5
CDH5-208ENST00000614547 SHCBP1Q8NEM2 672 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 NDEL1Q9GZM8 345 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 BTRCQ9Y297 605 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 ATP11BQ9Y2G3 1177 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 TLL2Q9Y6L7 1015 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 HMX2A2RU54 273 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 PLOD2O00469 737 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 MAFGO15525 162 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 HUS1O60921 280 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 ESRRBO95718 433 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 ATP5BP06576 529 aaKnown RBP11.93□□□□□ -0.5
CDH5-208ENST00000614547 NCAM1P13591 858 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 LIPMQ5VYY2 423 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 ARHGAP17Q68EM7 881 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 EPGNQ6UW88 154 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 ADGRG6Q86SQ4 1221 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 ERI1Q8IV48 349 aaKnown RBP11.93□□□□□ -0.5
CDH5-208ENST00000614547 FSTL5Q8N475 847 aaPredicted RBP11.93□□□□□ -0.5
CDH5-208ENST00000614547 SLC2A14Q8TDB8 520 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 APBB2Q92870 758 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 COX4I2Q96KJ9 171 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 MRPL45Q9BRJ2 306 aaKnown RBP11.93□□□□□ -0.5
CDH5-208ENST00000614547 NAT9Q9BTE0 207 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 STN1Q9H668 368 aaKnown RBP11.93□□□□□ -0.5
CDH5-208ENST00000614547 NOL6Q9H6R4 1146 aaKnown RBP11.93□□□□□ -0.5
CDH5-208ENST00000614547 ELP3Q9H9T3 547 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 FBRSL1Q9HCM7 1045 aaKnown RBP11.93□□□□□ -0.5
CDH5-208ENST00000614547 SUN2Q9UH99 717 aa11.93□□□□□ -0.5
CDH5-208ENST00000614547 BCLAF3A2AJT9 711 aaKnown RBP11.92□□□□□ -0.5
CDH5-208ENST00000614547 H3BNX3 289 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 GPR25O00155 361 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 ATP6V1B2P21281 511 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 UBA1P22314 1058 aaKnown RBP11.92□□□□□ -0.5
CDH5-208ENST00000614547 GSSP48637 474 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 NFYCQ13952 458 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 IKBKEQ14164 716 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 PPP1R3AQ16821 1122 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 RGS21Q2M5E4 152 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 DUS1LQ6P1R4 473 aaKnown RBP11.92□□□□□ -0.5
CDH5-208ENST00000614547 ZPBP2Q6X784 338 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 DNAJC14Q6Y2X3 702 aaPredicted RBP11.92□□□□□ -0.5
CDH5-208ENST00000614547 ADCK1Q86TW2 530 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 IFNLR1Q8IU57 520 aaPredicted RBP11.92□□□□□ -0.5
CDH5-208ENST00000614547 RBM12BQ8IXT5 1001 aaKnown RBP11.92□□□□□ -0.5
CDH5-208ENST00000614547 ZNF567Q8N184 647 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 DCBLD1Q8N8Z6 715 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 SMYD1Q8NB12 490 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 ACVR1CQ8NER5 493 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 ELMO1Q92556 727 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 FICDQ9BVA6 458 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 PLEKHA5Q9HAU0 1116 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 SPAG4Q9NPE6 437 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 DDX28Q9NUL7 540 aaKnown RBP11.92□□□□□ -0.5
CDH5-208ENST00000614547 STAP1Q9ULZ2 295 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 PCDHGC3Q9UN70 934 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 PPME1Q9Y570 386 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 FADS3Q9Y5Q0 445 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 FAM95CA0A1B0GW59 222 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 LSM1O15116 133 aaKnown RBP11.92□□□□□ -0.5
CDH5-208ENST00000614547 GNAO1P09471 354 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 NMBRP28336 390 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 ARRB2P32121 409 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 TRIM25Q14258 630 aaKnown RBP11.92□□□□□ -0.5
CDH5-208ENST00000614547 POLD3Q15054 466 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms