RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 CNTN4Q8IWV2 1026 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ARHGAP18Q8N392 663 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 TRIML2Q8N7C3 387 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 SNX31Q8N9S9 440 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 TEKT5Q96M29 485 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 C20orf27Q9GZN8 174 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CAAP1Q9H8G2 361 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 GINS2Q9Y248 185 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 THSD7BQ9C0I4 1608 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ZCWPW2A0A1B0GU75 182 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 MYBPHLA2RUH7 354 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 H2AFYO75367 372 aaKnown RBP11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ENO3P13929 434 aaPredicted RBP11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 GRIA1P42261 906 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 IFRD2Q12894 506 aaPredicted RBP11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 TRIM71Q2Q1W2 868 aaKnown RBP11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 C3orf58Q8NDZ4 430 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 SUSD3Q96L08 255 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 C1orf74Q96LT6 269 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 XPNPEP3Q9NQH7 507 aa11.03□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 H3BSA7 217 aa11.02□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 FGF10O15520 208 aaPredicted RBP11.02□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 MAGEC1O60732 1142 aa11.02□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CD1EP15812 388 aa11.02□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CD68P34810 354 aaPredicted RBP11.02□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 HARS2P49590 506 aaKnown RBP11.02□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 RAP1GDS1P52306 607 aa11.02□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 PRKAA2P54646 552 aa11.02□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 LINC00523Q86TU6 105 aa11.02□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CERS2Q96G23 380 aa11.02□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ZFP42Q96MM3 310 aa11.02□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 KIFC1Q9BW19 673 aa11.02□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 IL22Q9GZX6 179 aa11.02□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 TMEM30AQ9NV96 361 aa11.02□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 PNPOQ9NVS9 261 aa11.02□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 RBMX2Q9Y388 322 aaKnown RBP11.02□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 DTNAQ9Y4J8 743 aa11.02□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 TNFRSF10BO14763 440 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SEPT4O43236 478 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 PLIN3O60664 434 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 PSMB4P28070 264 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 MLH1P40692 756 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 C16orf72Q14CZ0 275 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 NADK2Q4G0N4 442 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TIGD5Q53EQ6 642 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 CES4AQ5XG92 561 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 GPRIN1Q7Z2K8 1008 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 DHDDSQ86SQ9 333 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 FAM149B1Q96BN6 582 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 LENG1Q96BZ8 264 aaPredicted RBP11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 HHIPL1Q96JK4 782 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 RBBP8Q99708 897 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 MED10Q9BTT4 135 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 WWP1Q9H0M0 922 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 IL37Q9NZH6 218 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TAGLN3Q9UI15 199 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SOX13Q9UN79 622 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 MYADML2A6NDP7 307 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 FAM155AB1AL88 458 aaPredicted RBP11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 FAM72CH0Y354 149 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ITM2AO43736 263 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 PCSK6P29122 969 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TPI1P60174 286 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 STX3Q13277 289 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 FAM72AQ5TYM5 149 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 FAM72DQ6L9T8 149 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 FAM72BQ86X60 149 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 METTL23Q86XA0 190 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SPNS2Q8IVW8 549 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ZFAND2BQ8WV99 257 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ATP2A3Q93084 1043 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 GAD1Q99259 594 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 IL12RB2Q99665 862 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SMOC2Q9H3U7 446 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 OSER1Q9NX31 292 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 DNAJC28Q9NX36 388 aa11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 MRPL42Q9Y6G3 142 aaKnown RBP11.02□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SERPINA6P08185 405 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 FGF3P11487 239 aaPredicted RBP11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 MGAT1P26572 445 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 LIMK2P53671 638 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TUSC3Q13454 348 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 GALNT7Q86SF2 657 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 RDH11Q8TC12 318 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 FCRL5Q96RD9 977 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 CCDC106Q9BWC9 280 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 WDCPQ9H6R7 721 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ABCC13Q9NSE7 274 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SYBUQ9NX95 663 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 PCDHB8Q9UN66 801 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 APOBEC2Q9Y235 224 aaKnown RBP11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ANKRD6Q9Y2G4 727 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 HBS1LQ9Y450 684 aaKnown RBP11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ANKRD12Q6UB98 2062 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SYNJ2BP-COX16A0A087WUM0 186 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 AOC1P19801 751 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ACAT1P24752 427 aaKnown RBP11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 FAM189BP81408 668 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SREBF2Q12772 1141 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TEDDM1Q5T9Z0 273 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms