RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 TM7SF2O76062 418 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 CYP11A1P05108 521 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 CCR1P32246 355 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 MSX2P35548 267 aaPredicted RBP14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 GRIA4P48058 902 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 GATMP50440 423 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 GRIK3Q13003 919 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 MBTPS1Q14703 1052 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 INSCQ1MX18 579 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 TCHHL1Q5QJ38 904 aaPredicted RBP14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 LRRC74BQ6ZQY2 392 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 KLHDC9Q8NEP7 349 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 PYDC1Q8WXC3 89 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 MYEOVQ96EZ4 313 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 MRGPRX2Q96LB1 330 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 NUF2Q9BZD4 464 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 PRDM16Q9HAZ2 1276 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 SLC27A5Q9Y2P5 690 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 PCDHB12Q9Y5F1 795 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 NVLO15381 856 aaKnown RBP14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 ZNF623O75123 536 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 FAM163BP0C2L3 166 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 ETFBP38117 255 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 CUL3Q13618 768 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 PTPRCAPQ14761 206 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 PSMD5Q16401 504 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 LRRC36Q1X8D7 754 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 CFAP157Q5JU67 520 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 CLLU1OSQ5K130 101 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 ZNF470Q6ECI4 717 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 PKN3Q6P5Z2 889 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 FSTL5Q8N475 847 aaPredicted RBP14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 MICAL1Q8TDZ2 1067 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 IRGQQ8WZA9 623 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 ISL2Q96A47 359 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 PABPC5Q96DU9 382 aaKnown RBP14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 ZNF333Q96JL9 665 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 KIFC1Q9BW19 673 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 CDH19Q9H159 772 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 OSBPL2Q9H1P3 480 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 SPC25Q9HBM1 224 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 ABCC13Q9NSE7 274 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 XPR1Q9UBH6 696 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 ACTL7AQ9Y615 435 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 OR51F1A6NGY5 319 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 TRIM13O60858 407 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 PIGNO95427 931 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 PRKAR2AP13861 404 aaKnown RBP14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 AOC1P19801 751 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 GRK2P25098 689 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 RAP1GDS1P52306 607 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 SLC34A1Q06495 639 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 SLC10A7Q0GE19 358 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 EFEMP1Q12805 493 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 CCDC153Q494R4 210 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 ARL13AQ5H913 290 aaPredicted RBP14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 MANEALQ5VSG8 457 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 MFSD14CQ5VZR4 134 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 CNSTQ6PJW8 725 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 THEM5Q8N1Q8 247 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 LINC01599Q8WXQ3 324 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 SUSD3Q96L08 255 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 GPR22Q99680 433 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 FSD1LQ9BXM9 530 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 NT5MQ9NPB1 228 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 GMIPQ9P107 970 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 ZDHHC2Q9UIJ5 367 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 TLL2Q9Y6L7 1015 aa14.28□□□□□ -0.12
PCDHGA3-202ENST00000612467 SEPT4O43236 478 aa14.27□□□□□ -0.12
PCDHGA3-202ENST00000612467 MTSS1O43312 755 aa14.27□□□□□ -0.12
PCDHGA3-202ENST00000612467 CCNCP24863 283 aa14.27□□□□□ -0.12
PCDHGA3-202ENST00000612467 ARCN1P48444 511 aaKnown RBP14.27□□□□□ -0.12
PCDHGA3-202ENST00000612467 TAS2R39P59534 338 aa14.27□□□□□ -0.12
PCDHGA3-202ENST00000612467 IRF5Q13568 498 aa14.27□□□□□ -0.12
PCDHGA3-202ENST00000612467 ANO4Q32M45 955 aa14.27□□□□□ -0.12
PCDHGA3-202ENST00000612467 HPS6Q86YV9 775 aa14.27□□□□□ -0.12
PCDHGA3-202ENST00000612467 CCNYL1Q8N7R7 359 aa14.27□□□□□ -0.12
PCDHGA3-202ENST00000612467 FAM136AQ96C01 138 aa14.27□□□□□ -0.12
PCDHGA3-202ENST00000612467 HMCESQ96FZ2 354 aa14.27□□□□□ -0.12
PCDHGA3-202ENST00000612467 IL12RB2Q99665 862 aa14.27□□□□□ -0.12
PCDHGA3-202ENST00000612467 SMOC2Q9H3U7 446 aa14.27□□□□□ -0.12
PCDHGA3-202ENST00000612467 CYP4F12Q9HCS2 524 aa14.27□□□□□ -0.12
PCDHGA3-202ENST00000612467 RRN3Q9NYV6 651 aa14.27□□□□□ -0.12
PCDHGA3-202ENST00000612467 IPO11Q9UI26 975 aaKnown RBP14.27□□□□□ -0.12
PCDHGA3-202ENST00000612467 TLK1Q9UKI8 766 aa14.27□□□□□ -0.12
PCDHGA3-202ENST00000612467 ADAM28Q9UKQ2 775 aa14.27□□□□□ -0.12
PCDHGA3-202ENST00000612467 KCTD3Q9Y597 815 aa14.27□□□□□ -0.12
PCDHGA3-202ENST00000612467 RAD54BQ9Y620 910 aa14.27□□□□□ -0.12
PCDHGA3-202ENST00000612467 FAM95CA0A1B0GW59 222 aa14.27□□□□□ -0.13
PCDHGA3-202ENST00000612467 ERI2A8K979 691 aaKnown RBP14.27□□□□□ -0.13
PCDHGA3-202ENST00000612467 MATN3O15232 486 aa14.27□□□□□ -0.13
PCDHGA3-202ENST00000612467 TIMM44O43615 452 aa14.27□□□□□ -0.13
PCDHGA3-202ENST00000612467 MAGEC1O60732 1142 aa14.27□□□□□ -0.13
PCDHGA3-202ENST00000612467 NEBLO76041 1014 aa14.27□□□□□ -0.13
PCDHGA3-202ENST00000612467 PAX7P23759 505 aa14.27□□□□□ -0.13
PCDHGA3-202ENST00000612467 PLK1P53350 603 aa14.27□□□□□ -0.13
PCDHGA3-202ENST00000612467 ATXN3P54252 364 aaPredicted RBP14.27□□□□□ -0.13
PCDHGA3-202ENST00000612467 DSC2Q02487 901 aa14.27□□□□□ -0.13
PCDHGA3-202ENST00000612467 PDCD2Q16342 344 aaPredicted RBP14.27□□□□□ -0.13
PCDHGA3-202ENST00000612467 PCID2Q5JVF3 399 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms