RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 SIKE1Q9BRV8 207 aa28.45■■■□□ 2.14
CSPG5-205ENST00000610462 TTPALQ9BTX7 342 aa28.45■■■□□ 2.14
CSPG5-205ENST00000610462 BRCA2P51587 3418 aa28.45■■■□□ 2.14
CSPG5-205ENST00000610462 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.44■■■□□ 2.14
CSPG5-205ENST00000610462 A8MUI8 341 aa28.44■■■□□ 2.14
CSPG5-205ENST00000610462 J3KR12 359 aa28.44■■■□□ 2.14
CSPG5-205ENST00000610462 HMBSP08397 361 aa28.44■■■□□ 2.14
CSPG5-205ENST00000610462 PBX3P40426 434 aa28.44■■■□□ 2.14
CSPG5-205ENST00000610462 WNT3AP56704 352 aa28.44■■■□□ 2.14
CSPG5-205ENST00000610462 GRM3Q14832 879 aa28.44■■■□□ 2.14
CSPG5-205ENST00000610462 DLG2Q15700 870 aa28.44■■■□□ 2.14
CSPG5-205ENST00000610462 TAS1R1Q7RTX1 841 aa28.44■■■□□ 2.14
CSPG5-205ENST00000610462 ALYREFQ86V81 257 aaKnown RBP28.44■■■□□ 2.14
CSPG5-205ENST00000610462 TMEM173Q86WV6 379 aaPredicted RBP28.44■■■□□ 2.14
CSPG5-205ENST00000610462 LYPLA1O75608 230 aaPredicted RBP28.44■■■□□ 2.14
CSPG5-205ENST00000610462 ATP5BP06576 529 aaKnown RBP28.44■■■□□ 2.14
CSPG5-205ENST00000610462 ZDHHC11BP0C7U3 371 aa28.44■■■□□ 2.14
CSPG5-205ENST00000610462 CSRP3P50461 194 aa28.44■■■□□ 2.14
CSPG5-205ENST00000610462 ESRP1Q6NXG1 681 aaKnown RBP28.44■■■□□ 2.14
CSPG5-205ENST00000610462 ACVR1CQ8NER5 493 aa28.44■■■□□ 2.14
CSPG5-205ENST00000610462 IMP4Q96G21 291 aaKnown RBP28.44■■■□□ 2.14
CSPG5-205ENST00000610462 TLE6Q9H808 572 aa28.44■■■□□ 2.14
CSPG5-205ENST00000610462 SP110Q9HB58 689 aa28.44■■■□□ 2.14
CSPG5-205ENST00000610462 NT5MQ9NPB1 228 aa28.44■■■□□ 2.14
CSPG5-205ENST00000610462 RALBP11234 206 aa28.43■■■□□ 2.14
CSPG5-205ENST00000610462 ARCN1P48444 511 aaKnown RBP28.43■■■□□ 2.14
CSPG5-205ENST00000610462 IRF9Q00978 393 aa28.43■■■□□ 2.14
CSPG5-205ENST00000610462 UGP2Q16851 508 aa28.43■■■□□ 2.14
CSPG5-205ENST00000610462 MARC1Q5VT66 337 aa28.43■■■□□ 2.14
CSPG5-205ENST00000610462 ARMC3Q5W041 872 aa28.43■■■□□ 2.14
CSPG5-205ENST00000610462 TTC7BQ86TV6 843 aa28.43■■■□□ 2.14
CSPG5-205ENST00000610462 WDR75Q8IWA0 830 aaKnown RBP28.43■■■□□ 2.14
CSPG5-205ENST00000610462 PIWIL2Q8TC59 973 aaKnown RBP28.43■■■□□ 2.14
CSPG5-205ENST00000610462 NMUR2Q9GZQ4 415 aa28.43■■■□□ 2.14
CSPG5-205ENST00000610462 ARNT2Q9HBZ2 717 aa28.43■■■□□ 2.14
CSPG5-205ENST00000610462 ZNF212Q9UDV6 495 aa28.43■■■□□ 2.14
CSPG5-205ENST00000610462 SLC39A10Q9ULF5 831 aa28.43■■■□□ 2.14
CSPG5-205ENST00000610462 DNAJC16Q9Y2G8 782 aa28.43■■■□□ 2.14
CSPG5-205ENST00000610462 TANC1Q9C0D5 1861 aa28.43■■■□□ 2.14
CSPG5-205ENST00000610462 VAPBO95292 243 aa28.42■■■□□ 2.14
CSPG5-205ENST00000610462 SLC8A1P32418 973 aa28.42■■■□□ 2.14
CSPG5-205ENST00000610462 MAP2K2P36507 400 aa28.42■■■□□ 2.14
CSPG5-205ENST00000610462 LONP2Q86WA8 852 aa28.42■■■□□ 2.14
CSPG5-205ENST00000610462 GIPC2Q8TF65 315 aa28.42■■■□□ 2.14
CSPG5-205ENST00000610462 ZNF296Q8WUU4 475 aaPredicted RBP28.42■■■□□ 2.14
CSPG5-205ENST00000610462 BCL7CQ8WUZ0 217 aaPredicted RBP28.42■■■□□ 2.14
CSPG5-205ENST00000610462 TREX1Q9NSU2 369 aa28.42■■■□□ 2.14
CSPG5-205ENST00000610462 ANKRD6Q9Y2G4 727 aa28.42■■■□□ 2.14
CSPG5-205ENST00000610462 SLC38A8A6NNN8 435 aa28.42■■■□□ 2.14
CSPG5-205ENST00000610462 SLC10A7Q0GE19 358 aa28.42■■■□□ 2.14
CSPG5-205ENST00000610462 PRSS55Q6UWB4 352 aaPredicted RBP28.42■■■□□ 2.14
CSPG5-205ENST00000610462 TEX26Q8N6G2 289 aa28.42■■■□□ 2.14
CSPG5-205ENST00000610462 PRKD2Q9BZL6 878 aa28.42■■■□□ 2.14
CSPG5-205ENST00000610462 ATXN3LQ9H3M9 355 aa28.42■■■□□ 2.14
CSPG5-205ENST00000610462 CCSER2Q9H7U1 834 aa28.42■■■□□ 2.14
CSPG5-205ENST00000610462 CCDC22O60826 627 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 SIN3BO75182 1162 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 AHSGP02765 367 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 PAMP19021 973 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 CALB2P22676 271 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 ARNTP27540 789 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 GABRB3P28472 473 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 KPNA1P52294 538 aaPredicted RBP28.41■■■□□ 2.14
CSPG5-205ENST00000610462 TNK2Q07912 1038 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 PCSK7Q16549 785 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 KDELC2Q7Z4H8 507 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 OR6Y1Q8NGX8 325 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 PSMG2Q969U7 264 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 RPRD1AQ96P16 312 aaPredicted RBP28.41■■■□□ 2.14
CSPG5-205ENST00000610462 KLHL5Q96PQ7 755 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 UBE2OQ9C0C9 1292 aaKnown RBP28.41■■■□□ 2.14
CSPG5-205ENST00000610462 ATP13A1Q9HD20 1204 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 VPS45Q9NRW7 570 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 SLC2A6Q9UGQ3 507 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 TLR5O60602 858 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 CHRNA4P43681 627 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 MTA1Q13330 715 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 KIAA0930Q6ICG6 404 aaPredicted RBP28.41■■■□□ 2.14
CSPG5-205ENST00000610462 PPP4R1Q8TF05 950 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 SH3TC2Q8TF17 1288 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 NSMCE1Q8WV22 266 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 PABPC5Q96DU9 382 aaKnown RBP28.41■■■□□ 2.14
CSPG5-205ENST00000610462 SORT1Q99523 831 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 TTLL2Q9BWV7 592 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 CDY1Q9Y6F8 540 aa28.41■■■□□ 2.14
CSPG5-205ENST00000610462 ATF6P18850 670 aa28.4■■■□□ 2.14
CSPG5-205ENST00000610462 ABCE1P61221 599 aaKnown RBP28.4■■■□□ 2.14
CSPG5-205ENST00000610462 ITKQ08881 620 aa28.4■■■□□ 2.14
CSPG5-205ENST00000610462 ITGA9Q13797 1035 aa28.4■■■□□ 2.14
CSPG5-205ENST00000610462 TNS4Q8IZW8 715 aa28.4■■■□□ 2.14
CSPG5-205ENST00000610462 LRRC43Q8N309 656 aa28.4■■■□□ 2.14
CSPG5-205ENST00000610462 SCLYQ96I15 445 aa28.4■■■□□ 2.14
CSPG5-205ENST00000610462 UNC93B1Q9H1C4 597 aa28.4■■■□□ 2.14
CSPG5-205ENST00000610462 NMRAL1Q9HBL8 299 aa28.4■■■□□ 2.14
CSPG5-205ENST00000610462 TLK1Q9UKI8 766 aa28.4■■■□□ 2.14
CSPG5-205ENST00000610462 G3V2L1 256 aa28.39■■■□□ 2.14
CSPG5-205ENST00000610462 RAMP2O60895 175 aa28.39■■■□□ 2.14
CSPG5-205ENST00000610462 WFS1O76024 890 aa28.39■■■□□ 2.14
CSPG5-205ENST00000610462 POLD2P49005 469 aa28.39■■■□□ 2.14
CSPG5-205ENST00000610462 HARS2P49590 506 aaKnown RBP28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms