RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 ZNF557Q8N988 423 aaPredicted RBP9.48□□□□□ -0.89
CTCFL-220ENST00000608858 ANKRD52Q8NB46 1076 aa9.48□□□□□ -0.89
CTCFL-220ENST00000608858 SLC4A11Q8NBS3 891 aa9.48□□□□□ -0.89
CTCFL-220ENST00000608858 PCDH19Q8TAB3 1148 aa9.48□□□□□ -0.89
CTCFL-220ENST00000608858 CPT1CQ8TCG5 803 aa9.48□□□□□ -0.89
CTCFL-220ENST00000608858 GRIN3AQ8TCU5 1115 aa9.48□□□□□ -0.89
CTCFL-220ENST00000608858 CLEC4CQ8WTT0 213 aa9.48□□□□□ -0.89
CTCFL-220ENST00000608858 BTN2A2Q8WVV5 523 aa9.48□□□□□ -0.89
CTCFL-220ENST00000608858 FEM1CQ96JP0 617 aa9.48□□□□□ -0.89
CTCFL-220ENST00000608858 ZSCAN31Q96LW9 406 aaPredicted RBP9.48□□□□□ -0.89
CTCFL-220ENST00000608858 DDX50Q9BQ39 737 aaKnown RBP9.48□□□□□ -0.89
CTCFL-220ENST00000608858 SLC39A2Q9NP94 309 aa9.48□□□□□ -0.89
CTCFL-220ENST00000608858 KCND3Q9UK17 655 aa9.48□□□□□ -0.89
CTCFL-220ENST00000608858 ITGB1BP2Q9UKP3 347 aa9.48□□□□□ -0.89
CTCFL-220ENST00000608858 F8P00451 2351 aa9.48□□□□□ -0.89
CTCFL-220ENST00000608858 NYNRINQ9P2P1 1898 aaKnown RBP9.47□□□□□ -0.89
CTCFL-220ENST00000608858 IGLV3-27P01718 113 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 FGF3P11487 239 aaPredicted RBP9.47□□□□□ -0.89
CTCFL-220ENST00000608858 CTSEP14091 401 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 TACR2P21452 398 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 MPSTP25325 297 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 THOP1P52888 689 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 AP3M2P53677 418 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 RAD23BP54727 409 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 SLC8A3P57103 927 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 CLDN10P78369 228 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 PTK2BQ14289 1009 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 ZACNQ401N2 412 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 TMEM259Q4ZIN3 620 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 KYAT3Q6YP21 454 aaKnown RBP9.47□□□□□ -0.89
CTCFL-220ENST00000608858 CCDC73Q6ZRK6 1079 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 ERN2Q76MJ5 926 aaKnown RBP9.47□□□□□ -0.89
CTCFL-220ENST00000608858 HID1Q8IV36 788 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 SIX6OS1Q8N1H7 587 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 ARL10Q8N8L6 244 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 ZNF454Q8N9F8 522 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 GALNT11Q8NCW6 608 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 OR52K2Q8NGK3 314 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 TAS1R2Q8TE23 839 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 SCG3Q8WXD2 468 aaKnown RBP9.47□□□□□ -0.89
CTCFL-220ENST00000608858 TAF4BQ92750 862 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 RNF34Q969K3 372 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 FCRL2Q96LA5 508 aaPredicted RBP9.47□□□□□ -0.89
CTCFL-220ENST00000608858 CATSPER2Q96P56 530 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 KLF6Q99612 283 aaPredicted RBP9.47□□□□□ -0.89
CTCFL-220ENST00000608858 TNKS2Q9H2K2 1166 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 GPR27Q9NS67 375 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 DONSONQ9NYP3 566 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 MAP10Q9P2G4 905 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 TFIP11Q9UBB9 837 aaKnown RBP9.47□□□□□ -0.89
CTCFL-220ENST00000608858 SLC25A13Q9UJS0 675 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 B3GALT1Q9Y5Z6 326 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 NF1P21359 2839 aa9.47□□□□□ -0.89
CTCFL-220ENST00000608858 PRRC2CQ9Y520 2896 aaKnown RBP9.46□□□□□ -0.89
CTCFL-220ENST00000608858 LOC101059948A0A1B0GTJ6 334 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 ARHGAP10A1A4S6 786 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 EIF3DO15371 548 aaKnown RBP eCLIP9.46□□□□□ -0.9
CTCFL-220ENST00000608858 SMAD6O43541 496 aaKnown RBP9.46□□□□□ -0.9
CTCFL-220ENST00000608858 ATP9BO43861 1147 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 CD82P27701 267 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 EIF4A3P38919 411 aaKnown RBP9.46□□□□□ -0.9
CTCFL-220ENST00000608858 GCLMP48507 274 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 DAOAP59103 153 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 RPS21P63220 83 aaKnown RBP9.46□□□□□ -0.9
CTCFL-220ENST00000608858 PPARDQ03181 441 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 SULT2A1Q06520 285 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 SEPT6Q14141 434 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 ARHGAP44Q17R89 818 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 ZC3H12AQ5D1E8 599 aaKnown RBP9.46□□□□□ -0.9
CTCFL-220ENST00000608858 FAM26FQ5R3K3 315 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 C1orf220Q5T0J3 134 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 VPS36Q86VN1 386 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 CHSY1Q86X52 802 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 CCAR2Q8N163 923 aaKnown RBP9.46□□□□□ -0.9
CTCFL-220ENST00000608858 ATP11CQ8NB49 1132 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 OR2A12Q8NGT7 310 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 ERCC4Q92889 916 aaPredicted RBP9.46□□□□□ -0.9
CTCFL-220ENST00000608858 AZIN2Q96A70 460 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 TCTN2Q96GX1 697 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 TAAR9Q96RI9 348 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 FEM1AQ9BSK4 669 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 MIS12Q9H081 205 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 CYP3A43Q9HB55 503 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 FBXO2Q9UK22 296 aaPredicted RBP9.46□□□□□ -0.9
CTCFL-220ENST00000608858 NAALADL1Q9UQQ1 740 aa9.46□□□□□ -0.9
CTCFL-220ENST00000608858 TCP11X1B4DZS4 312 aa9.45□□□□□ -0.9
CTCFL-220ENST00000608858 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.45□□□□□ -0.9
CTCFL-220ENST00000608858 XPO1O14980 1071 aaKnown RBP9.45□□□□□ -0.9
CTCFL-220ENST00000608858 B4GAT1O43505 415 aa9.45□□□□□ -0.9
CTCFL-220ENST00000608858 SNAP91O60641 907 aa9.45□□□□□ -0.9
CTCFL-220ENST00000608858 RAD1O60671 282 aa9.45□□□□□ -0.9
CTCFL-220ENST00000608858 LEFTY1O75610 366 aa9.45□□□□□ -0.9
CTCFL-220ENST00000608858 DDAH2O95865 285 aa9.45□□□□□ -0.9
CTCFL-220ENST00000608858 PDCP20941 246 aa9.45□□□□□ -0.9
CTCFL-220ENST00000608858 RRM1P23921 792 aa9.45□□□□□ -0.9
CTCFL-220ENST00000608858 TXLNAP40222 546 aa9.45□□□□□ -0.9
CTCFL-220ENST00000608858 DNA2P51530 1060 aa9.45□□□□□ -0.9
CTCFL-220ENST00000608858 OR1D5P58170 312 aa9.45□□□□□ -0.9
CTCFL-220ENST00000608858 PFN3P60673 137 aa9.45□□□□□ -0.9
CTCFL-220ENST00000608858 CCDC15Q0P6D6 951 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms