RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 LRSAM1Q6UWE0 723 aa10.87□□□□□ -0.67
TUBE1-210ENST00000604967 PARS2Q7L3T8 475 aaKnown RBP10.87□□□□□ -0.67
TUBE1-210ENST00000604967 UMODL1-AS1Q8N2C9 162 aa10.87□□□□□ -0.67
TUBE1-210ENST00000604967 TMIEQ8NEW7 156 aa10.87□□□□□ -0.67
TUBE1-210ENST00000604967 FNIP1Q8TF40 1166 aa10.87□□□□□ -0.67
TUBE1-210ENST00000604967 CELF6Q96J87 481 aaKnown RBP10.87□□□□□ -0.67
TUBE1-210ENST00000604967 SLC39A8Q9C0K1 460 aa10.87□□□□□ -0.67
TUBE1-210ENST00000604967 MAGEH1Q9H213 219 aa10.87□□□□□ -0.67
TUBE1-210ENST00000604967 GAREM1Q9H706 876 aa10.87□□□□□ -0.67
TUBE1-210ENST00000604967 FZD3Q9NPG1 666 aa10.87□□□□□ -0.67
TUBE1-210ENST00000604967 TMEM51Q9NW97 253 aa10.87□□□□□ -0.67
TUBE1-210ENST00000604967 TOR4AQ9NXH8 423 aa10.87□□□□□ -0.67
TUBE1-210ENST00000604967 CWC15Q9P013 229 aaKnown RBP10.87□□□□□ -0.67
TUBE1-210ENST00000604967 ITM2BQ9Y287 266 aa10.87□□□□□ -0.67
TUBE1-210ENST00000604967 NCKAP1Q9Y2A7 1128 aa10.87□□□□□ -0.67
TUBE1-210ENST00000604967 USP24Q9UPU5 2620 aa10.87□□□□□ -0.67
TUBE1-210ENST00000604967 KMT2BQ9UMN6 2715 aaPredicted RBP10.86□□□□□ -0.67
TUBE1-210ENST00000604967 ZFHX4Q86UP3 3567 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 TBC1D3DA0A087WVF3 549 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 TBC1D3IA0A087WXS9 549 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 TBC1D3EA0A087X179 549 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 TBC1D3KA0A087X1G2 549 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 TBC1D3FA6NER0 549 aaPredicted RBP10.86□□□□□ -0.67
TUBE1-210ENST00000604967 LRRC72A6NJI9 287 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 TBC1D3LB9A6J9 549 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 KPNA3O00505 521 aaPredicted RBP10.86□□□□□ -0.67
TUBE1-210ENST00000604967 MUSKO15146 869 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 RAD51BO15315 384 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 OPHN1O60890 802 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 TMCC1O94876 653 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 CYP1A2P05177 515 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 SYPP08247 313 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 TBC1D3HP0C7X1 549 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 PRLRP16471 622 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 IL4RP24394 825 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 EIF4A3P38919 411 aaKnown RBP10.86□□□□□ -0.67
TUBE1-210ENST00000604967 GRIA4P48058 902 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 RACK1P63244 317 aaKnown RBP10.86□□□□□ -0.67
TUBE1-210ENST00000604967 SLC25A11Q02978 314 aaKnown RBP10.86□□□□□ -0.67
TUBE1-210ENST00000604967 ZNF423Q2M1K9 1284 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 SMTNL2Q2TAL5 461 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 ATP13A4Q4VNC1 1196 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 TMEM259Q4ZIN3 620 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 TDRD12Q587J7 1177 aaKnown RBP10.86□□□□□ -0.67
TUBE1-210ENST00000604967 EFHC2Q5JST6 749 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 TPRG1LQ5T0D9 272 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 TBC1D3GQ6DHY5 549 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 TBC1D3CQ6IPX1 549 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 RFX8Q6ZV50 586 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 KANSL1Q7Z3B3 1105 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 RABEPKQ7Z6M1 372 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 SLCO6A1Q86UG4 719 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 TRIM69Q86WT6 500 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 VSTM4Q8IW00 320 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 NAXDQ8IW45 347 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 TBC1D3Q8IZP1 549 aaPredicted RBP10.86□□□□□ -0.67
TUBE1-210ENST00000604967 PCDH20Q8N6Y1 951 aaKnown RBP10.86□□□□□ -0.67
TUBE1-210ENST00000604967 TMEM145Q8NBT3 493 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 FUBP1Q96AE4 644 aaKnown RBP10.86□□□□□ -0.67
TUBE1-210ENST00000604967 ISG20Q96AZ6 181 aaKnown RBP10.86□□□□□ -0.67
TUBE1-210ENST00000604967 CHP1Q99653 195 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 TMEM121BQ9BXQ6 578 aaPredicted RBP10.86□□□□□ -0.67
TUBE1-210ENST00000604967 HDAC8Q9BY41 377 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 CEP44Q9C0F1 390 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 DHX35Q9H5Z1 703 aaKnown RBP10.86□□□□□ -0.67
TUBE1-210ENST00000604967 IL36AQ9UHA7 158 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 PCOLCE2Q9UKZ9 415 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 CABIN1Q9Y6J0 2220 aa10.86□□□□□ -0.67
TUBE1-210ENST00000604967 TP53BP1Q12888 1972 aaPredicted RBP10.86□□□□□ -0.67
TUBE1-210ENST00000604967 FREM2Q5SZK8 3169 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 MAP1BP46821 2468 aaKnown RBP10.85□□□□□ -0.67
TUBE1-210ENST00000604967 A0A1W2PQU0 124 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 GOLGA6L19H0YKK7 550 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 VILLO15195 856 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 SLC7A4O43246 635 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 BUB1BO60566 1050 aaPredicted RBP10.85□□□□□ -0.67
TUBE1-210ENST00000604967 RNGTTO60942 597 aaKnown RBP10.85□□□□□ -0.67
TUBE1-210ENST00000604967 PEX11BO96011 259 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 CD48P09326 243 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 ERCC2P18074 760 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 PAPOLAP51003 745 aaKnown RBP10.85□□□□□ -0.67
TUBE1-210ENST00000604967 DNA2P51530 1060 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 ARSEP51690 589 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 TPI1P60174 286 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 SLC20A2Q08357 652 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 SKOR2Q2VWA4 1001 aaPredicted RBP10.85□□□□□ -0.67
TUBE1-210ENST00000604967 ERMARDQ5T6L9 678 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 RETSATQ6NUM9 610 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 NYAP1Q6ZVC0 841 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 ERN2Q76MJ5 926 aaKnown RBP10.85□□□□□ -0.67
TUBE1-210ENST00000604967 ZSWIM9Q86XI8 627 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 MARCH9Q86YJ5 346 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 GATAD2AQ86YP4 633 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 PNPLA1Q8N8W4 532 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 TSC1Q92574 1164 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 SERAC1Q96JX3 654 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 EXOC2Q96KP1 924 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 PPP1R9BQ96SB3 815 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 DNAJC7Q99615 494 aa10.85□□□□□ -0.67
TUBE1-210ENST00000604967 EPAS1Q99814 870 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms