RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 CEACAM1P13688 526 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 ITGB7P26010 798 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 CCNHP51946 323 aaPredicted RBP11.76□□□□□ -0.53
CCDC12-209ENST00000604164 NEK3P51956 506 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 ZNF252P-AS1Q0IIN9 211 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 CNTN1Q12860 1018 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 GRM3Q14832 879 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 SETMARQ53H47 684 aaPredicted RBP11.76□□□□□ -0.53
CCDC12-209ENST00000604164 ARSIQ5FYB1 569 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 PPP6R3Q5H9R7 873 aaPredicted RBP11.76□□□□□ -0.53
CCDC12-209ENST00000604164 AGBL4Q5VU57 503 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 ERN2Q76MJ5 926 aaKnown RBP11.76□□□□□ -0.53
CCDC12-209ENST00000604164 DNAAF5Q86Y56 855 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 RYBPQ8N488 228 aaPredicted RBP11.76□□□□□ -0.53
CCDC12-209ENST00000604164 OR2AP1Q8NGE2 309 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 C1orf216Q8TAB5 229 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 GRIN3AQ8TCU5 1115 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 ARHGEF26Q96DR7 871 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 GDAP1L1Q96MZ0 367 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 MAGEB5Q9BZ81 275 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 ABHD10Q9NUJ1 306 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 NDFIP2Q9NV92 336 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 CTTNBP2NLQ9P2B4 639 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 HECAQ9UBI9 543 aaPredicted RBP11.76□□□□□ -0.53
CCDC12-209ENST00000604164 SARDHQ9UL12 918 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 FCF1Q9Y324 198 aaKnown RBP11.76□□□□□ -0.53
CCDC12-209ENST00000604164 AKR1B15C9JRZ8 316 aaPredicted RBP11.75□□□□□ -0.53
CCDC12-209ENST00000604164 VILLO15195 856 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 LATO43561 262 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 RNGTTO60942 597 aaKnown RBP11.75□□□□□ -0.53
CCDC12-209ENST00000604164 LEFTY1O75610 366 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 IGSF6O95976 241 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 CTSLP07711 333 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 KCNA4P22459 653 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 CSNK1EP49674 416 aaKnown RBP11.75□□□□□ -0.53
CCDC12-209ENST00000604164 NOVA1P51513 510 aaKnown RBP11.75□□□□□ -0.53
CCDC12-209ENST00000604164 RHOAP61586 193 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 OVGP1Q12889 678 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 RFTN1Q14699 578 aaPredicted RBP11.75□□□□□ -0.53
CCDC12-209ENST00000604164 SUZ12Q15022 739 aaKnown RBP11.75□□□□□ -0.53
CCDC12-209ENST00000604164 DPYSL2Q16555 572 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 TMCO4Q5TGY1 634 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 FBXL19Q6PCT2 694 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 ARFGAP1Q8N6T3 406 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 ZNF564Q8TBZ8 553 aaPredicted RBP11.75□□□□□ -0.53
CCDC12-209ENST00000604164 RAB7BQ96AH8 199 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 HMCESQ96FZ2 354 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 SERAC1Q96JX3 654 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 PEBP4Q96S96 227 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 TM6SF2Q9BZW4 377 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 TRIM7Q9C029 511 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 ZDHHC6Q9H6R6 413 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 GAREM1Q9H706 876 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 LRRC19Q9H756 370 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 AASDHPPTQ9NRN7 309 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 GPATCH2LQ9NWQ4 482 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 RCOR3Q9P2K3 495 aaPredicted RBP11.75□□□□□ -0.53
CCDC12-209ENST00000604164 UBA2Q9UBT2 640 aaPredicted RBP11.75□□□□□ -0.53
CCDC12-209ENST00000604164 ANKRD6Q9Y2G4 727 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 PCDHGB2Q9Y5G2 931 aa11.75□□□□□ -0.53
CCDC12-209ENST00000604164 CEP250Q9BV73 2442 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 A0A1B0GVT2 93 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 PRAMEF26H0Y7S4 382 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 KRIT1O00522 736 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 YKT6O15498 198 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 AP1G1O43747 822 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 ZNF821O75541 412 aaPredicted RBP11.74□□□□□ -0.53
CCDC12-209ENST00000604164 TMCC1O94876 653 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 KCNK5O95279 499 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 CD160O95971 181 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 TMEM253P0C7T8 217 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 ERCC2P18074 760 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 CD38P28907 300 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 SERPINB6P35237 376 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 SSR1P43307 286 aaKnown RBP11.74□□□□□ -0.53
CCDC12-209ENST00000604164 KRT81Q14533 505 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 STAT4Q14765 748 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 HLA-BQ31612 363 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 MYLK3Q32MK0 819 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 INAVAQ3KP66 663 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 POM121L1PQ3SYA9 428 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 ZNF805Q5CZA5 627 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 PIP5KL1Q5T9C9 394 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 NAPEPLDQ6IQ20 393 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 TMCO3Q6UWJ1 677 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 IQCHQ86VS3 1027 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 MAP7D3Q8IWC1 876 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 RHOT2Q8IXI1 618 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 CHST14Q8NCH0 376 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 FAM174AQ8TBP5 190 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 HSPH1Q92598 858 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 FEM1CQ96JP0 617 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 KCTD15Q96SI1 283 aaPredicted RBP11.74□□□□□ -0.53
CCDC12-209ENST00000604164 NOL6Q9H6R4 1146 aaKnown RBP11.74□□□□□ -0.53
CCDC12-209ENST00000604164 NHEJ1Q9H9Q4 299 aaPredicted RBP11.74□□□□□ -0.53
CCDC12-209ENST00000604164 SP110Q9HB58 689 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 FSCN3Q9NQT6 498 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.74□□□□□ -0.53
CCDC12-209ENST00000604164 NENFQ9UMX5 172 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 MFHAS1Q9Y4C4 1052 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms