RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 SLC31A1O15431 190 aa16.68■□□□□ 0.26
TUBE1-206ENST00000603722 CREB3O43889 395 aa16.68■□□□□ 0.26
TUBE1-206ENST00000603722 SERPINC1P01008 464 aa16.68■□□□□ 0.26
TUBE1-206ENST00000603722 ITGAVP06756 1048 aa16.68■□□□□ 0.26
TUBE1-206ENST00000603722 DESP17661 470 aa16.68■□□□□ 0.26
TUBE1-206ENST00000603722 EPHA8P29322 1005 aaPredicted RBP16.68■□□□□ 0.26
TUBE1-206ENST00000603722 L1CAMP32004 1257 aa16.68■□□□□ 0.26
TUBE1-206ENST00000603722 NEK3P51956 506 aa16.68■□□□□ 0.26
TUBE1-206ENST00000603722 OGDHQ02218 1023 aa16.68■□□□□ 0.26
TUBE1-206ENST00000603722 STAT4Q14765 748 aa16.68■□□□□ 0.26
TUBE1-206ENST00000603722 IQCB1Q15051 598 aa16.68■□□□□ 0.26
TUBE1-206ENST00000603722 POLD3Q15054 466 aaPredicted RBP16.68■□□□□ 0.26
TUBE1-206ENST00000603722 ZNF284Q2VY69 593 aa16.68■□□□□ 0.26
TUBE1-206ENST00000603722 E4F1Q66K89 784 aaPredicted RBP16.68■□□□□ 0.26
TUBE1-206ENST00000603722 SPATS2Q86XZ4 545 aaKnown RBP16.68■□□□□ 0.26
TUBE1-206ENST00000603722 ZNF354CQ86Y25 554 aa16.68■□□□□ 0.26
TUBE1-206ENST00000603722 DNAAF5Q86Y56 855 aa16.68■□□□□ 0.26
TUBE1-206ENST00000603722 RYBPQ8N488 228 aaPredicted RBP16.68■□□□□ 0.26
TUBE1-206ENST00000603722 RTL3Q8N8U3 475 aaKnown RBP16.68■□□□□ 0.26
TUBE1-206ENST00000603722 MAGEH1Q9H213 219 aa16.68■□□□□ 0.26
TUBE1-206ENST00000603722 HAUS4Q9H6D7 363 aa16.68■□□□□ 0.26
TUBE1-206ENST00000603722 FZD3Q9NPG1 666 aa16.68■□□□□ 0.26
TUBE1-206ENST00000603722 HECAQ9UBI9 543 aaPredicted RBP16.68■□□□□ 0.26
TUBE1-206ENST00000603722 FTSJ1Q9UET6 329 aa16.68■□□□□ 0.26
TUBE1-206ENST00000603722 FZD10Q9ULW2 581 aa16.68■□□□□ 0.26
TUBE1-206ENST00000603722 HPCAL4Q9UM19 191 aa16.68■□□□□ 0.26
TUBE1-206ENST00000603722 SYCE3A1L190 88 aa16.67■□□□□ 0.26
TUBE1-206ENST00000603722 YKT6O15498 198 aa16.67■□□□□ 0.26
TUBE1-206ENST00000603722 PCDH8O95206 1070 aa16.67■□□□□ 0.26
TUBE1-206ENST00000603722 ITGB7P26010 798 aa16.67■□□□□ 0.26
TUBE1-206ENST00000603722 GKP32189 559 aa16.67■□□□□ 0.26
TUBE1-206ENST00000603722 ARRB1P49407 418 aaPredicted RBP16.67■□□□□ 0.26
TUBE1-206ENST00000603722 GEMIN4P57678 1058 aaKnown RBP16.67■□□□□ 0.26
TUBE1-206ENST00000603722 MAMLD1Q13495 774 aa16.67■□□□□ 0.26
TUBE1-206ENST00000603722 CCDC157Q569K6 752 aa16.67■□□□□ 0.26
TUBE1-206ENST00000603722 SFMBT2Q5VUG0 894 aa16.67■□□□□ 0.26
TUBE1-206ENST00000603722 SEL1L3Q68CR1 1132 aa16.67■□□□□ 0.26
TUBE1-206ENST00000603722 PPP1R2P3Q6NXS1 205 aa16.67■□□□□ 0.26
TUBE1-206ENST00000603722 NEK5Q6P3R8 708 aa16.67■□□□□ 0.26
TUBE1-206ENST00000603722 PARS2Q7L3T8 475 aaKnown RBP16.67■□□□□ 0.26
TUBE1-206ENST00000603722 ZNF571Q7Z3V5 609 aaPredicted RBP16.67■□□□□ 0.26
TUBE1-206ENST00000603722 TMC6Q7Z403 805 aa16.67■□□□□ 0.26
TUBE1-206ENST00000603722 IQCHQ86VS3 1027 aa16.67■□□□□ 0.26
TUBE1-206ENST00000603722 HORMAD1Q86X24 394 aa16.67■□□□□ 0.26
TUBE1-206ENST00000603722 OXR1Q8N573 874 aa16.67■□□□□ 0.26
TUBE1-206ENST00000603722 KDF1Q8NAX2 398 aaPredicted RBP16.67■□□□□ 0.26
TUBE1-206ENST00000603722 TMEM145Q8NBT3 493 aa16.67■□□□□ 0.26
TUBE1-206ENST00000603722 SAP25Q8TEE9 199 aa16.67■□□□□ 0.26
TUBE1-206ENST00000603722 ISG20Q96AZ6 181 aaKnown RBP16.67■□□□□ 0.26
TUBE1-206ENST00000603722 EPAS1Q99814 870 aa16.67■□□□□ 0.26
TUBE1-206ENST00000603722 PARVAQ9NVD7 372 aa16.67■□□□□ 0.26
TUBE1-206ENST00000603722 ZMIZ1Q9ULJ6 1067 aa16.67■□□□□ 0.26
TUBE1-206ENST00000603722 ZFR2Q9UPR6 939 aaKnown RBP16.67■□□□□ 0.26
TUBE1-206ENST00000603722 CXorf51AA0A1B0GTR3 108 aa16.66■□□□□ 0.26
TUBE1-206ENST00000603722 FAM221BA6H8Z2 402 aa16.66■□□□□ 0.26
TUBE1-206ENST00000603722 TMEM8BA6NDV4 472 aa16.66■□□□□ 0.26
TUBE1-206ENST00000603722 TNFSF14O43557 240 aa16.66■□□□□ 0.26
TUBE1-206ENST00000603722 BUB1O43683 1085 aa16.66■□□□□ 0.26
TUBE1-206ENST00000603722 KDELR3O43731 214 aa16.66■□□□□ 0.26
TUBE1-206ENST00000603722 ADRB3P13945 408 aa16.66■□□□□ 0.26
TUBE1-206ENST00000603722 PSMA2P25787 234 aa16.66■□□□□ 0.26
TUBE1-206ENST00000603722 AKT2P31751 481 aa16.66■□□□□ 0.26
TUBE1-206ENST00000603722 AIF1P55008 147 aa16.66■□□□□ 0.26
TUBE1-206ENST00000603722 OVGP1Q12889 678 aa16.66■□□□□ 0.26
TUBE1-206ENST00000603722 FBXL19Q6PCT2 694 aa16.66■□□□□ 0.26
TUBE1-206ENST00000603722 OR2AP1Q8NGE2 309 aa16.66■□□□□ 0.26
TUBE1-206ENST00000603722 ZCCHC14Q8WYQ9 949 aaKnown RBP16.66■□□□□ 0.26
TUBE1-206ENST00000603722 HMCESQ96FZ2 354 aa16.66■□□□□ 0.26
TUBE1-206ENST00000603722 VCPIP1Q96JH7 1222 aa16.66■□□□□ 0.26
TUBE1-206ENST00000603722 TTYH3Q9C0H2 523 aa16.66■□□□□ 0.26
TUBE1-206ENST00000603722 NOL6Q9H6R4 1146 aaKnown RBP16.66■□□□□ 0.26
TUBE1-206ENST00000603722 ERVMER34-1Q9H9K5 563 aa16.66■□□□□ 0.26
TUBE1-206ENST00000603722 GPATCH2LQ9NWQ4 482 aa16.66■□□□□ 0.26
TUBE1-206ENST00000603722 AIPL1Q9NZN9 384 aa16.66■□□□□ 0.26
TUBE1-206ENST00000603722 NYNRINQ9P2P1 1898 aaKnown RBP16.66■□□□□ 0.26
TUBE1-206ENST00000603722 CACNA1EQ15878 2313 aa16.65■□□□□ 0.26
TUBE1-206ENST00000603722 TPRP12270 2363 aaKnown RBP16.65■□□□□ 0.26
TUBE1-206ENST00000603722 KRIT1O00522 736 aa16.65■□□□□ 0.26
TUBE1-206ENST00000603722 MAGEC1O60732 1142 aa16.65■□□□□ 0.26
TUBE1-206ENST00000603722 TMCC1O94876 653 aa16.65■□□□□ 0.26
TUBE1-206ENST00000603722 DKK1O94907 266 aa16.65■□□□□ 0.26
TUBE1-206ENST00000603722 GSRP00390 522 aa16.65■□□□□ 0.26
TUBE1-206ENST00000603722 HNRNPA2B1P22626 353 aaKnown RBP16.65■□□□□ 0.26
TUBE1-206ENST00000603722 PRKCIP41743 596 aa16.65■□□□□ 0.26
TUBE1-206ENST00000603722 PI4KAP42356 2102 aa16.65■□□□□ 0.26
TUBE1-206ENST00000603722 SNRPD1P62314 119 aaKnown RBP16.65■□□□□ 0.26
TUBE1-206ENST00000603722 KLHL30Q0D2K2 578 aa16.65■□□□□ 0.26
TUBE1-206ENST00000603722 BNIP3Q12983 259 aa16.65■□□□□ 0.26
TUBE1-206ENST00000603722 MAPK8IP2Q13387 824 aaPredicted RBP16.65■□□□□ 0.26
TUBE1-206ENST00000603722 KLHL40Q2TBA0 621 aa16.65■□□□□ 0.26
TUBE1-206ENST00000603722 ATXN7L2Q5T6C5 722 aaPredicted RBP16.65■□□□□ 0.26
TUBE1-206ENST00000603722 PLEKHA7Q6IQ23 1121 aa16.65■□□□□ 0.26
TUBE1-206ENST00000603722 LUZP1Q86V48 1076 aa16.65■□□□□ 0.26
TUBE1-206ENST00000603722 PLPP6Q8IY26 295 aa16.65■□□□□ 0.26
TUBE1-206ENST00000603722 EID2Q8N6I1 236 aa16.65■□□□□ 0.26
TUBE1-206ENST00000603722 NETO2Q8NC67 525 aa16.65■□□□□ 0.26
TUBE1-206ENST00000603722 KLHDC7BQ96G42 594 aa16.65■□□□□ 0.26
TUBE1-206ENST00000603722 KLC2Q9H0B6 622 aa16.65■□□□□ 0.26
TUBE1-206ENST00000603722 CATSPERBQ9H7T0 1116 aa16.65■□□□□ 0.26
TUBE1-206ENST00000603722 CBX8Q9HC52 389 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms