RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 KCTD15Q96SI1 283 aaPredicted RBP22.29■■□□□ 1.16
PPFIA3-208ENST00000602726 NUP85Q9BW27 656 aa22.29■■□□□ 1.16
PPFIA3-208ENST00000602726 SLC32A1Q9H598 525 aa22.29■■□□□ 1.16
PPFIA3-208ENST00000602726 GAREM1Q9H706 876 aa22.29■■□□□ 1.16
PPFIA3-208ENST00000602726 HECAQ9UBI9 543 aaPredicted RBP22.29■■□□□ 1.16
PPFIA3-208ENST00000602726 ANKRD6Q9Y2G4 727 aa22.29■■□□□ 1.16
PPFIA3-208ENST00000602726 UPK3BL1B0FP48 263 aa22.28■■□□□ 1.16
PPFIA3-208ENST00000602726 UPK3BL2E5RIL1 263 aa22.28■■□□□ 1.16
PPFIA3-208ENST00000602726 CYP1A2P05177 515 aa22.28■■□□□ 1.16
PPFIA3-208ENST00000602726 ADRB1P08588 477 aa22.28■■□□□ 1.16
PPFIA3-208ENST00000602726 CEACAM1P13688 526 aa22.28■■□□□ 1.16
PPFIA3-208ENST00000602726 PPP2CBP62714 309 aa22.28■■□□□ 1.16
PPFIA3-208ENST00000602726 PPP2CAP67775 309 aa22.28■■□□□ 1.16
PPFIA3-208ENST00000602726 SLC14A1Q13336 389 aa22.28■■□□□ 1.16
PPFIA3-208ENST00000602726 PIGHQ14442 188 aaPredicted RBP22.28■■□□□ 1.16
PPFIA3-208ENST00000602726 KIF19Q2TAC6 998 aa22.28■■□□□ 1.16
PPFIA3-208ENST00000602726 HLA-BQ31612 363 aa22.28■■□□□ 1.16
PPFIA3-208ENST00000602726 PRPF39Q86UA1 669 aaKnown RBP22.28■■□□□ 1.16
PPFIA3-208ENST00000602726 PLPP6Q8IY26 295 aa22.28■■□□□ 1.16
PPFIA3-208ENST00000602726 DEFB124Q8NES8 71 aa22.28■■□□□ 1.16
PPFIA3-208ENST00000602726 ARRDC3Q96B67 414 aa22.28■■□□□ 1.16
PPFIA3-208ENST00000602726 SLC6A18Q96N87 628 aa22.28■■□□□ 1.16
PPFIA3-208ENST00000602726 DNAJC7Q99615 494 aa22.28■■□□□ 1.16
PPFIA3-208ENST00000602726 EBF2Q9HAK2 575 aa22.28■■□□□ 1.16
PPFIA3-208ENST00000602726 AASDHPPTQ9NRN7 309 aa22.28■■□□□ 1.16
PPFIA3-208ENST00000602726 ANAPC7Q9UJX3 599 aa22.28■■□□□ 1.16
PPFIA3-208ENST00000602726 WASF2Q9Y6W5 498 aa22.28■■□□□ 1.16
PPFIA3-208ENST00000602726 C10orf142B7Z368 130 aa22.27■■□□□ 1.16
PPFIA3-208ENST00000602726 GIPC1O14908 333 aa22.27■■□□□ 1.16
PPFIA3-208ENST00000602726 LATO43561 262 aa22.27■■□□□ 1.16
PPFIA3-208ENST00000602726 GJB3O75712 270 aa22.27■■□□□ 1.16
PPFIA3-208ENST00000602726 SNRPD1P62314 119 aaKnown RBP22.27■■□□□ 1.16
PPFIA3-208ENST00000602726 SERINC3Q13530 473 aa22.27■■□□□ 1.16
PPFIA3-208ENST00000602726 PIP5KL1Q5T9C9 394 aa22.27■■□□□ 1.16
PPFIA3-208ENST00000602726 N4BP2L1Q5TBK1 243 aaPredicted RBP22.27■■□□□ 1.16
PPFIA3-208ENST00000602726 LAYNQ6UX15 382 aa22.27■■□□□ 1.16
PPFIA3-208ENST00000602726 RFX8Q6ZV50 586 aa22.27■■□□□ 1.16
PPFIA3-208ENST00000602726 CYP4V2Q6ZWL3 525 aaPredicted RBP22.27■■□□□ 1.16
PPFIA3-208ENST00000602726 ERN2Q76MJ5 926 aaKnown RBP22.27■■□□□ 1.16
PPFIA3-208ENST00000602726 CASKIN2Q8WXE0 1202 aa22.27■■□□□ 1.16
PPFIA3-208ENST00000602726 SKA1Q96BD8 255 aa22.27■■□□□ 1.16
PPFIA3-208ENST00000602726 SERAC1Q96JX3 654 aa22.27■■□□□ 1.16
PPFIA3-208ENST00000602726 HDAC8Q9BY41 377 aa22.27■■□□□ 1.16
PPFIA3-208ENST00000602726 KLC2Q9H0B6 622 aa22.27■■□□□ 1.16
PPFIA3-208ENST00000602726 DEF6Q9H4E7 631 aa22.27■■□□□ 1.16
PPFIA3-208ENST00000602726 ZDHHC6Q9H6R6 413 aa22.27■■□□□ 1.16
PPFIA3-208ENST00000602726 PREBQ9HCU5 417 aa22.27■■□□□ 1.16
PPFIA3-208ENST00000602726 IP6K2Q9UHH9 426 aa22.27■■□□□ 1.16
PPFIA3-208ENST00000602726 SNX11Q9Y5W9 270 aa22.27■■□□□ 1.16
PPFIA3-208ENST00000602726 RNF103O00237 685 aa22.26■■□□□ 1.15
PPFIA3-208ENST00000602726 TMCC1O94876 653 aa22.26■■□□□ 1.15
PPFIA3-208ENST00000602726 GSRP00390 522 aa22.26■■□□□ 1.15
PPFIA3-208ENST00000602726 CD59P13987 128 aa22.26■■□□□ 1.15
PPFIA3-208ENST00000602726 MAT2AP31153 395 aaKnown RBP22.26■■□□□ 1.15
PPFIA3-208ENST00000602726 NUDT1P36639 197 aa22.26■■□□□ 1.15
PPFIA3-208ENST00000602726 ZNF135P52742 658 aaPredicted RBP22.26■■□□□ 1.15
PPFIA3-208ENST00000602726 NDST2P52849 883 aa22.26■■□□□ 1.15
PPFIA3-208ENST00000602726 C21orf59P57076 290 aa22.26■■□□□ 1.15
PPFIA3-208ENST00000602726 TAS2R38P59533 333 aa22.26■■□□□ 1.15
PPFIA3-208ENST00000602726 BOLA3Q53S33 107 aa22.26■■□□□ 1.15
PPFIA3-208ENST00000602726 INO80DQ53TQ3 878 aaPredicted RBP22.26■■□□□ 1.15
PPFIA3-208ENST00000602726 PIP4P1Q86T03 277 aa22.26■■□□□ 1.15
PPFIA3-208ENST00000602726 TRIM69Q86WT6 500 aa22.26■■□□□ 1.15
PPFIA3-208ENST00000602726 OR2AP1Q8NGE2 309 aa22.26■■□□□ 1.15
PPFIA3-208ENST00000602726 OR6K2Q8NGY2 324 aa22.26■■□□□ 1.15
PPFIA3-208ENST00000602726 ARHGEF26Q96DR7 871 aa22.26■■□□□ 1.15
PPFIA3-208ENST00000602726 BTBD6Q96KE9 485 aa22.26■■□□□ 1.15
PPFIA3-208ENST00000602726 LRRC19Q9H756 370 aa22.26■■□□□ 1.15
PPFIA3-208ENST00000602726 IL21RQ9HBE5 538 aa22.26■■□□□ 1.15
PPFIA3-208ENST00000602726 PCNX2A6NKB5 2137 aa22.25■■□□□ 1.15
PPFIA3-208ENST00000602726 CABIN1Q9Y6J0 2220 aa22.25■■□□□ 1.15
PPFIA3-208ENST00000602726 MYO1FO00160 1098 aa22.25■■□□□ 1.15
PPFIA3-208ENST00000602726 KRIT1O00522 736 aa22.25■■□□□ 1.15
PPFIA3-208ENST00000602726 VILLO15195 856 aa22.25■■□□□ 1.15
PPFIA3-208ENST00000602726 RNGTTO60942 597 aaKnown RBP22.25■■□□□ 1.15
PPFIA3-208ENST00000602726 ERCC2P18074 760 aa22.25■■□□□ 1.15
PPFIA3-208ENST00000602726 ITGB7P26010 798 aa22.25■■□□□ 1.15
PPFIA3-208ENST00000602726 IL1R2P27930 398 aa22.25■■□□□ 1.15
PPFIA3-208ENST00000602726 SLC18A3Q16572 532 aa22.25■■□□□ 1.15
PPFIA3-208ENST00000602726 KCNT1Q5JUK3 1230 aa22.25■■□□□ 1.15
PPFIA3-208ENST00000602726 NIPA2Q8N8Q9 360 aa22.25■■□□□ 1.15
PPFIA3-208ENST00000602726 CELF6Q96J87 481 aaKnown RBP22.25■■□□□ 1.15
PPFIA3-208ENST00000602726 LRIG1Q96JA1 1093 aa22.25■■□□□ 1.15
PPFIA3-208ENST00000602726 ZWILCHQ9H900 591 aa22.25■■□□□ 1.15
PPFIA3-208ENST00000602726 NENFQ9UMX5 172 aa22.25■■□□□ 1.15
PPFIA3-208ENST00000602726 FNDC3AQ9Y2H6 1198 aaKnown RBP22.25■■□□□ 1.15
PPFIA3-208ENST00000602726 PLXNA2O75051 1894 aa22.25■■□□□ 1.15
PPFIA3-208ENST00000602726 ARHGAP42A6NI28 874 aa22.24■■□□□ 1.15
PPFIA3-208ENST00000602726 POP4O95707 220 aaKnown RBP22.24■■□□□ 1.15
PPFIA3-208ENST00000602726 CD38P28907 300 aa22.24■■□□□ 1.15
PPFIA3-208ENST00000602726 HCAR3P49019 387 aa22.24■■□□□ 1.15
PPFIA3-208ENST00000602726 NEK3P51956 506 aa22.24■■□□□ 1.15
PPFIA3-208ENST00000602726 RHOAP61586 193 aa22.24■■□□□ 1.15
PPFIA3-208ENST00000602726 MAPK8IP2Q13387 824 aaPredicted RBP22.24■■□□□ 1.15
PPFIA3-208ENST00000602726 SMTNL2Q2TAL5 461 aa22.24■■□□□ 1.15
PPFIA3-208ENST00000602726 MYLK3Q32MK0 819 aa22.24■■□□□ 1.15
PPFIA3-208ENST00000602726 SETMARQ53H47 684 aaPredicted RBP22.24■■□□□ 1.15
PPFIA3-208ENST00000602726 SLC45A4Q5BKX6 768 aa22.24■■□□□ 1.15
PPFIA3-208ENST00000602726 ATXN7L2Q5T6C5 722 aaPredicted RBP22.24■■□□□ 1.15
PPFIA3-208ENST00000602726 NAPEPLDQ6IQ20 393 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms