RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 SDC3O75056 442 aa18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 PRLRP16471 622 aa18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 GGCXP38435 758 aa18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 NRG1Q02297 640 aaPredicted RBP18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 APBA1Q02410 837 aa18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 SGCGQ13326 291 aa18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 CAMK4Q16566 473 aa18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 TBC1D25Q3MII6 688 aa18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 KLHDC7AQ5VTJ3 777 aa18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 CDCP2Q5VXM1 449 aa18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 KYAT3Q6YP21 454 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 BNIPLQ7Z465 357 aa18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 XYLT1Q86Y38 959 aa18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 OR13H1Q8NG92 308 aa18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 FCRL3Q96P31 734 aaPredicted RBP18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 STK33Q9BYT3 514 aa18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 ABCG4Q9H172 646 aa18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 ATP13A1Q9HD20 1204 aa18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 MPP6Q9NZW5 540 aa18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 TMEM59LQ9UK28 342 aa18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 HPCAL4Q9UM19 191 aa18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 TOR1BO14657 336 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 FPGTO14772 594 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 ATXN7O15265 892 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 OPA1O60313 960 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 BRINP1O60477 761 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 ZMPSTE24O75844 475 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 DXOO77932 396 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 CSF2P04141 144 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 ADRB3P13945 408 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 MAPKAPK2P49137 400 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 UCNP55089 124 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 GNA12Q03113 381 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 RAPGEF1Q13905 1077 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 GPR155Q7Z3F1 870 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 TFAP2DQ7Z6R9 452 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 CHST14Q8NCH0 376 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 ZNF248Q8NDW4 579 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 DENND6BQ8NEG7 585 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 BTN2A2Q8WVV5 523 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 OSBPL1AQ9BXW6 950 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 OSBPL2Q9H1P3 480 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 ANLNQ9NQW6 1124 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 GPR27Q9NS67 375 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 ZNF212Q9UDV6 495 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 IPO11Q9UI26 975 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 SALL4Q9UJQ4 1053 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 ZFR2Q9UPR6 939 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 CA5BQ9Y2D0 317 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 DAAM1Q9Y4D1 1078 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 FADS3Q9Y5Q0 445 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 WASF2Q9Y6W5 498 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 DOCK9Q9BZ29 2069 aa18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 NYNRINQ9P2P1 1898 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-227ENST00000602011 ASH1LQ9NR48 2969 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 SPTY2D1-AS1A0A0U1RR47 76 aa18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 I6L893 689 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 TPP1O14773 563 aa18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 LZTS3O60299 673 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 ZNF821O75541 412 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 PAK4O96013 591 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 LSSP48449 732 aa18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 ERVPABLB-1P60509 514 aa18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 CCDC173Q0VFZ6 552 aa18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 PTK2BQ14289 1009 aa18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 POLD3Q15054 466 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 ZCCHC8Q6NZY4 707 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 LINGO4Q6UY18 593 aa18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 GCNT7Q6ZNI0 430 aa18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 OR7D4Q8NG98 312 aa18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 GRIN3AQ8TCU5 1115 aa18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 KLK6Q92876 244 aa18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 BMFQ96LC9 184 aa18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 APOLD1Q96LR9 279 aa18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 C1QTNF2Q9BXJ5 285 aa18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 MAGEH1Q9H213 219 aa18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 TNKS2Q9H2K2 1166 aa18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 PLCB1Q9NQ66 1216 aa18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 UCKL1Q9NWZ5 548 aa18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 DNAJC28Q9NX36 388 aa18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 HECAQ9UBI9 543 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 CFAP46Q8IYW2 2715 aa18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 MGAQ8IWI9 3026 aa18.15■□□□□ 0.5
SHKBP1-227ENST00000602011 ZSCAN5CA6NGD5 496 aaPredicted RBP18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 K7ESM1 405 aa18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 POP4O95707 220 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 GIMD1P0DJR0 217 aa18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 UCHL3P15374 230 aa18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 NME1P15531 152 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 RHOQP17081 205 aa18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 TFE3P19532 575 aaPredicted RBP18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 ADRA1BP35368 520 aa18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 FLT3P36888 993 aa18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 DNA2P51530 1060 aa18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 CCNHP51946 323 aaPredicted RBP18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 SNRPD1P62314 119 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 BROXQ5VW32 411 aa18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 SEL1L3Q68CR1 1132 aa18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 DPY19L2P1Q6NXN4 242 aa18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 IGF2-ASQ6U949 168 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms