RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 TMCC1O94876 653 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 SUN1O94901 812 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 SLC20A2Q08357 652 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 MPP3Q13368 585 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 RUNX3Q13761 415 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 ASTLQ6HA08 431 aaPredicted RBP22.93■■□□□ 1.26
IRF3-228ENST00000601291 NAPEPLDQ6IQ20 393 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 RELL1Q8IUW5 271 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 KLHDC8BQ8IXV7 354 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 PGBD5Q8N414 524 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 OXNAD1Q96HP4 312 aaPredicted RBP22.93■■□□□ 1.26
IRF3-228ENST00000601291 TXLNGYQ9BZA5 131 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 SAYSD1Q9NPB0 183 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 VPS45Q9NRW7 570 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 SLC25A13Q9UJS0 675 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 ACTL7AQ9Y615 435 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 DOCK8Q8NF50 2099 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 MBTPS2O43462 519 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 MLNP12872 115 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 SP100P23497 879 aaPredicted RBP22.93■■□□□ 1.26
IRF3-228ENST00000601291 GDI1P31150 447 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 SERPINH1P50454 418 aaKnown RBP22.93■■□□□ 1.26
IRF3-228ENST00000601291 PDIA2Q13087 525 aaKnown RBP22.93■■□□□ 1.26
IRF3-228ENST00000601291 CASP8Q14790 479 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 CYTH1Q15438 398 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 DNAJC21Q5F1R6 531 aaKnown RBP22.93■■□□□ 1.26
IRF3-228ENST00000601291 SPDYCQ5MJ68 293 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 KCTD11Q693B1 232 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 ALG1LQ6GMV1 187 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 LINC00523Q86TU6 105 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 TSEN2Q8NCE0 465 aaKnown RBP22.93■■□□□ 1.26
IRF3-228ENST00000601291 SPATA22Q8NHS9 363 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 WFIKKN2Q8TEU8 576 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 UBLCP1Q8WVY7 318 aaPredicted RBP22.93■■□□□ 1.26
IRF3-228ENST00000601291 UBP1Q9NZI7 540 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 NUMBLQ9Y6R0 609 aa22.93■■□□□ 1.26
IRF3-228ENST00000601291 AP3B1O00203 1094 aa22.92■■□□□ 1.26
IRF3-228ENST00000601291 CD160O95971 181 aa22.92■■□□□ 1.26
IRF3-228ENST00000601291 MT-CYBP00156 380 aaPredicted RBP22.92■■□□□ 1.26
IRF3-228ENST00000601291 CES1P23141 567 aa22.92■■□□□ 1.26
IRF3-228ENST00000601291 DSC2Q02487 901 aa22.92■■□□□ 1.26
IRF3-228ENST00000601291 HTR4Q13639 388 aa22.92■■□□□ 1.26
IRF3-228ENST00000601291 FNBP1LQ5T0N5 605 aa22.92■■□□□ 1.26
IRF3-228ENST00000601291 LRRC8BQ6P9F7 803 aa22.92■■□□□ 1.26
IRF3-228ENST00000601291 TRMT10CQ7L0Y3 403 aaKnown RBP22.92■■□□□ 1.26
IRF3-228ENST00000601291 KIAA0907Q7Z7F0 614 aaPredicted RBP22.92■■□□□ 1.26
IRF3-228ENST00000601291 ZBED8Q8IZ13 594 aa22.92■■□□□ 1.26
IRF3-228ENST00000601291 DEFB123Q8N688 67 aa22.92■■□□□ 1.26
IRF3-228ENST00000601291 PPM1EQ8WY54 764 aa22.92■■□□□ 1.26
IRF3-228ENST00000601291 GUCD1Q96NT3 240 aa22.92■■□□□ 1.26
IRF3-228ENST00000601291 SEMA3CQ99985 751 aa22.92■■□□□ 1.26
IRF3-228ENST00000601291 FSD1LQ9BXM9 530 aa22.92■■□□□ 1.26
IRF3-228ENST00000601291 E7ESA3 106 aa22.91■■□□□ 1.26
IRF3-228ENST00000601291 ANHXE9PGG2 379 aa22.91■■□□□ 1.26
IRF3-228ENST00000601291 MUSKO15146 869 aa22.91■■□□□ 1.26
IRF3-228ENST00000601291 TULP3O75386 442 aa22.91■■□□□ 1.26
IRF3-228ENST00000601291 CD86P42081 329 aa22.91■■□□□ 1.26
IRF3-228ENST00000601291 MAGEA4P43358 317 aa22.91■■□□□ 1.26
IRF3-228ENST00000601291 RHOAP61586 193 aa22.91■■□□□ 1.26
IRF3-228ENST00000601291 BBS9Q3SYG4 887 aa22.91■■□□□ 1.26
IRF3-228ENST00000601291 ZNF534Q76KX8 674 aa22.91■■□□□ 1.26
IRF3-228ENST00000601291 CAND1Q86VP6 1230 aaKnown RBP22.91■■□□□ 1.26
IRF3-228ENST00000601291 ETFBKMTQ8IXQ9 262 aa22.91■■□□□ 1.26
IRF3-228ENST00000601291 IPMKQ8NFU5 416 aa22.91■■□□□ 1.26
IRF3-228ENST00000601291 ARRDC2Q8TBH0 407 aa22.91■■□□□ 1.26
IRF3-228ENST00000601291 HLA-CQ95604 372 aa22.91■■□□□ 1.26
IRF3-228ENST00000601291 CDC42EP4Q9H3Q1 356 aaKnown RBP22.91■■□□□ 1.26
IRF3-228ENST00000601291 ZNF446Q9NWS9 450 aa22.91■■□□□ 1.26
IRF3-228ENST00000601291 SLC27A6Q9Y2P4 619 aa22.91■■□□□ 1.26
IRF3-228ENST00000601291 POLR2EP19388 210 aaKnown RBP22.9■■□□□ 1.26
IRF3-228ENST00000601291 NIPAL4Q0D2K0 466 aa22.9■■□□□ 1.26
IRF3-228ENST00000601291 SPARCL1Q14515 664 aa22.9■■□□□ 1.26
IRF3-228ENST00000601291 SLC14A2Q15849 920 aa22.9■■□□□ 1.26
IRF3-228ENST00000601291 MBLAC2Q68D91 279 aa22.9■■□□□ 1.26
IRF3-228ENST00000601291 GRAMD4Q6IC98 578 aa22.9■■□□□ 1.26
IRF3-228ENST00000601291 PRPF39Q86UA1 669 aaKnown RBP22.9■■□□□ 1.26
IRF3-228ENST00000601291 C12orf40Q86WS4 652 aa22.9■■□□□ 1.26
IRF3-228ENST00000601291 ATP11CQ8NB49 1132 aa22.9■■□□□ 1.26
IRF3-228ENST00000601291 TTC25Q96NG3 672 aa22.9■■□□□ 1.26
IRF3-228ENST00000601291 TBL1YQ9BQ87 522 aa22.9■■□□□ 1.26
IRF3-228ENST00000601291 FUT8Q9BYC5 575 aa22.9■■□□□ 1.26
IRF3-228ENST00000601291 PABPC3Q9H361 631 aaKnown RBP22.9■■□□□ 1.26
IRF3-228ENST00000601291 DEC1Q9P2X7 70 aa22.9■■□□□ 1.26
IRF3-228ENST00000601291 FCF1Q9Y324 198 aaKnown RBP22.9■■□□□ 1.26
IRF3-228ENST00000601291 OTOL1A6NHN0 477 aaPredicted RBP22.89■■□□□ 1.26
IRF3-228ENST00000601291 ALOX15BO15296 676 aa22.89■■□□□ 1.26
IRF3-228ENST00000601291 ATP8B1O43520 1251 aa22.89■■□□□ 1.26
IRF3-228ENST00000601291 PMPCBO75439 489 aa22.89■■□□□ 1.26
IRF3-228ENST00000601291 SERPINF2P08697 491 aa22.89■■□□□ 1.26
IRF3-228ENST00000601291 CISD3P0C7P0 127 aa22.89■■□□□ 1.26
IRF3-228ENST00000601291 HSD17B3P37058 310 aa22.89■■□□□ 1.26
IRF3-228ENST00000601291 ECT2LQ008S8 904 aa22.89■■□□□ 1.26
IRF3-228ENST00000601291 NSUN2Q08J23 767 aaKnown RBP eCLIP22.89■■□□□ 1.26
IRF3-228ENST00000601291 CBLBQ13191 982 aa22.89■■□□□ 1.26
IRF3-228ENST00000601291 ADIPOR2Q86V24 386 aa22.89■■□□□ 1.26
IRF3-228ENST00000601291 DNAAF3Q8N9W5 541 aa22.89■■□□□ 1.26
IRF3-228ENST00000601291 LRRC39Q96DD0 335 aa22.89■■□□□ 1.26
IRF3-228ENST00000601291 NUDCD1Q96RS6 583 aa22.89■■□□□ 1.26
IRF3-228ENST00000601291 RPP25Q9BUL9 199 aaKnown RBP22.89■■□□□ 1.26
IRF3-228ENST00000601291 SEMA4AQ9H3S1 761 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms