RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 TADA1Q96BN2 335 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 CYTH2Q99418 400 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 IGFLR1Q9H665 355 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 KIF9Q9HAQ2 790 aa17.93■□□□□ 0.46
SHKBP1-224ENST00000600718 NOTCH4Q99466 2003 aa17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 TCRBV9S1A1TA0A576 114 aa17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 POC1B-GALNT4F8VUJ3 575 aa17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 PMPCBO75439 489 aa17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 PGAM1P18669 254 aa17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 GLDCP23378 1020 aa17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 MZF1P28698 734 aaPredicted RBP17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 MAXP61244 160 aa17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 SKIDA1Q1XH10 827 aa17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 FYB2Q5VWT5 728 aa17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 KDELC1Q6UW63 502 aa17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 KIAA1958Q8N8K9 716 aa17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 GSDMBQ8TAX9 411 aa17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 RIN3Q8TB24 985 aa17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 ARRDC2Q8TBH0 407 aa17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 OTUB2Q96DC9 234 aa17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 ALG14Q96F25 216 aa17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 PSKH2Q96QS6 385 aa17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 FICDQ9BVA6 458 aa17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 IL22Q9GZX6 179 aa17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 PIH1D1Q9NWS0 290 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 SYBUQ9NX95 663 aa17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 SAMD15Q9P1V8 674 aa17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 KIAA1522Q9P206 1035 aaPredicted RBP17.92■□□□□ 0.46
SHKBP1-224ENST00000600718 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 ZMPSTE24O75844 475 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 CSKP41240 450 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 WNT3AP56704 352 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 DSC2Q02487 901 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 CBX2Q14781 532 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 ALG1LQ6GMV1 187 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 RANBP10Q6VN20 620 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 CELF5Q8N6W0 485 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 BHMTQ93088 406 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 MRGPRX2Q96LB1 330 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 APOL2Q9BQE5 337 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 CINPQ9BW66 212 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 FSD1LQ9BXM9 530 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 NSUN3Q9H649 340 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 PLAC1Q9HBJ0 212 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 VPS28Q9UK41 221 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 MYO18AQ92614 2054 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 CHD5Q8TDI0 1954 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 HELZP42694 1942 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 SLC9A3R1O14745 358 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 MMP2P08253 660 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 CES1P23141 567 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 PRKCHP24723 683 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 GCAP28676 217 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 CD86P42081 329 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 MAGOHP61326 146 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 CRADDP78560 199 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 SKOR1P84550 965 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 RARS2Q5T160 578 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 POTEHQ6S545 545 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 DCAF4L2Q8NA75 395 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 WFDC5Q8TCV5 224 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 SEMA3CQ99985 751 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 MGME1Q9BQP7 344 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 ARNT2Q9HBZ2 717 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 EURLQ9NYK6 297 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 ADAM21Q9UKJ8 722 aa17.91■□□□□ 0.46
SHKBP1-224ENST00000600718 POLBP06746 335 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 FSHRP23945 695 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 ARF5P84085 180 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 SLC12A1Q13621 1099 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 CYTH1Q15438 398 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 SLC14A2Q15849 920 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 INO80DQ53TQ3 878 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 EMC10Q5UCC4 262 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 DENND5AQ6IQ26 1287 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 GPR149Q86SP6 731 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 EFHBQ8N7U6 833 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 IRF7Q92985 503 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 DHRS4Q9BTZ2 278 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 C2orf49Q9BVC5 232 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 PLK2Q9NYY3 685 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 ATG2AQ2TAZ0 1938 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 MUSKO15146 869 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 PENKP01210 267 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 NR1D1P20393 614 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 MSH2P43246 934 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 NUMBP49757 651 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 PLK1P53350 603 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 GYS2P54840 703 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 HYAL1Q12794 435 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 KBTBD12Q3ZCT8 623 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 SPANXN3Q5MJ09 141 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 CERCAMQ5T4B2 595 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 TMEM25Q86YD3 366 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 ARFGAP2Q8N6H7 521 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 ZNF557Q8N988 423 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 ACDQ96AP0 544 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 MOCS1Q9NZB8 636 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 PSMC3IPQ9P2W1 217 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 CTNNAL1Q9UBT7 734 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms