RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	TSGA13	Q96PP4	275 aa		22.35	■■□□□ 1.17
LTBP4-227	ENST00000600026	QKI	Q96PU8	341 aa	Known RBP eCLIP	22.35	■■□□□ 1.17
LTBP4-227	ENST00000600026	MTG2	Q9H4K7	406 aa		22.35	■■□□□ 1.17
LTBP4-227	ENST00000600026	PDF	Q9HBH1	243 aa		22.35	■■□□□ 1.17
LTBP4-227	ENST00000600026	CD248	Q9HCU0	757 aa		22.35	■■□□□ 1.17
LTBP4-227	ENST00000600026	DNPEP	Q9ULA0	475 aa		22.35	■■□□□ 1.17
LTBP4-227	ENST00000600026	ZNF148	Q9UQR1	794 aa		22.35	■■□□□ 1.17
LTBP4-227	ENST00000600026	DRG1	Q9Y295	367 aa	Known RBP	22.35	■■□□□ 1.17
LTBP4-227	ENST00000600026	CXorf51A	A0A1B0GTR3	108 aa		22.34	■■□□□ 1.17
LTBP4-227	ENST00000600026	CFAP69	A5D8W1	941 aa		22.34	■■□□□ 1.17
LTBP4-227	ENST00000600026	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	22.34	■■□□□ 1.17
LTBP4-227	ENST00000600026		K7ERQ8	282 aa		22.34	■■□□□ 1.17
LTBP4-227	ENST00000600026		K7ESF4	209 aa		22.34	■■□□□ 1.17
LTBP4-227	ENST00000600026	GALR2	O43603	387 aa	Predicted RBP	22.34	■■□□□ 1.17
LTBP4-227	ENST00000600026	ATP9B	O43861	1147 aa		22.34	■■□□□ 1.17
LTBP4-227	ENST00000600026	FNTA	P49354	379 aa		22.34	■■□□□ 1.17
LTBP4-227	ENST00000600026	DGKE	P52429	567 aa		22.34	■■□□□ 1.17
LTBP4-227	ENST00000600026	LMNB2	Q03252	620 aa		22.34	■■□□□ 1.17
LTBP4-227	ENST00000600026	IL10RB	Q08334	325 aa		22.34	■■□□□ 1.17
LTBP4-227	ENST00000600026	STARD3	Q14849	445 aa		22.34	■■□□□ 1.17
LTBP4-227	ENST00000600026	HNRNPA1L2	Q32P51	320 aa	Known RBP	22.34	■■□□□ 1.17
LTBP4-227	ENST00000600026	HEATR6	Q6AI08	1181 aa	Known RBP	22.34	■■□□□ 1.17
LTBP4-227	ENST00000600026	CCDC13	Q8IYE1	715 aa		22.34	■■□□□ 1.17
LTBP4-227	ENST00000600026	TSTD1	Q8NFU3	115 aa		22.34	■■□□□ 1.17
LTBP4-227	ENST00000600026	FRS2	Q8WU20	508 aa		22.34	■■□□□ 1.17
LTBP4-227	ENST00000600026	LGMN	Q99538	433 aa		22.34	■■□□□ 1.17
LTBP4-227	ENST00000600026	POLM	Q9NP87	494 aa	Predicted RBP	22.34	■■□□□ 1.17
LTBP4-227	ENST00000600026	RRAGD	Q9NQL2	400 aa	Predicted RBP	22.34	■■□□□ 1.17
LTBP4-227	ENST00000600026	FEZ2	Q9UHY8	353 aa	Predicted RBP	22.34	■■□□□ 1.17
LTBP4-227	ENST00000600026	EDDM13	A0A1B0GTR0	161 aa		22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026	TCRBV21S2A2	A0A5A6	115 aa		22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026	BCLAF3	A2AJT9	711 aa	Known RBP	22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026		J3KR12	359 aa		22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026	MTSS1	O43312	755 aa		22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026	SMAD6	O43541	496 aa	Known RBP	22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026	SYNCRIP	O60506	623 aa	Known RBP	22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026	MAFK	O60675	156 aa		22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026	PRAMEF11	O60813	436 aa		22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026	COIL	P38432	576 aa	Predicted RBP	22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026	CLCN6	P51797	869 aa		22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026	GEMIN4	P57678	1058 aa	Known RBP	22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026	SLC20A2	Q08357	652 aa		22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026	PRKD1	Q15139	912 aa	Predicted RBP	22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026	DLG2	Q15700	870 aa		22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026	ACCSL	Q4AC99	568 aa		22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026	C22orf39	Q6P5X5	142 aa		22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026	TSSK4	Q6SA08	328 aa		22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026	ATL2	Q8NHH9	583 aa		22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026	GRK7	Q8WTQ7	553 aa		22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026	CARD6	Q9BX69	1037 aa		22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026	SUN2	Q9UH99	717 aa		22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026	FCF1	Q9Y324	198 aa	Known RBP	22.33	■■□□□ 1.17
LTBP4-227	ENST00000600026	EML5	Q05BV3	1969 aa		22.32	■■□□□ 1.16
LTBP4-227	ENST00000600026	SIN3B	O75182	1162 aa		22.32	■■□□□ 1.16
LTBP4-227	ENST00000600026	ITGAV	P06756	1048 aa		22.32	■■□□□ 1.16
LTBP4-227	ENST00000600026	TDGF1	P13385	188 aa		22.32	■■□□□ 1.16
LTBP4-227	ENST00000600026	VAV1	P15498	845 aa		22.32	■■□□□ 1.16
LTBP4-227	ENST00000600026	C2orf54	Q08AI8	447 aa		22.32	■■□□□ 1.16
LTBP4-227	ENST00000600026	CAMK2G	Q13555	558 aa	Predicted RBP	22.32	■■□□□ 1.16
LTBP4-227	ENST00000600026	ANGPT1	Q15389	498 aa		22.32	■■□□□ 1.16
LTBP4-227	ENST00000600026	OASL	Q15646	514 aa	Known RBP	22.32	■■□□□ 1.16
LTBP4-227	ENST00000600026	CCDC137	Q6PK04	289 aa	Known RBP	22.32	■■□□□ 1.16
LTBP4-227	ENST00000600026	KLHL7	Q8IXQ5	586 aa		22.32	■■□□□ 1.16
LTBP4-227	ENST00000600026	PTPRN2	Q92932	1015 aa		22.32	■■□□□ 1.16
LTBP4-227	ENST00000600026	CCDC114	Q96M63	670 aa		22.32	■■□□□ 1.16
LTBP4-227	ENST00000600026	ZNF599	Q96NL3	588 aa		22.32	■■□□□ 1.16
LTBP4-227	ENST00000600026	DDX47	Q9H0S4	455 aa	Known RBP	22.32	■■□□□ 1.16
LTBP4-227	ENST00000600026	PRSS16	Q9NQE7	514 aa		22.32	■■□□□ 1.16
LTBP4-227	ENST00000600026	UBA2	Q9UBT2	640 aa	Predicted RBP	22.32	■■□□□ 1.16
LTBP4-227	ENST00000600026	FBXO4	Q9UKT5	387 aa		22.32	■■□□□ 1.16
LTBP4-227	ENST00000600026	WDFY4	Q6ZS81	3184 aa		22.32	■■□□□ 1.16
LTBP4-227	ENST00000600026	TARSL2	A2RTX5	802 aa	Known RBP	22.31	■■□□□ 1.16
LTBP4-227	ENST00000600026	MATN3	O15232	486 aa		22.31	■■□□□ 1.16
LTBP4-227	ENST00000600026	NEBL	O76041	1014 aa		22.31	■■□□□ 1.16
LTBP4-227	ENST00000600026	STK10	O94804	968 aa	Known RBP	22.31	■■□□□ 1.16
LTBP4-227	ENST00000600026	APBB3	O95704	486 aa		22.31	■■□□□ 1.16
LTBP4-227	ENST00000600026	RBL1	P28749	1068 aa		22.31	■■□□□ 1.16
LTBP4-227	ENST00000600026	STIP1	P31948	543 aa	Known RBP	22.31	■■□□□ 1.16
LTBP4-227	ENST00000600026	CSTF1	Q05048	431 aa	Known RBP	22.31	■■□□□ 1.16
LTBP4-227	ENST00000600026		Q6ZVU0	165 aa		22.31	■■□□□ 1.16
LTBP4-227	ENST00000600026	B4GALNT4	Q76KP1	1039 aa		22.31	■■□□□ 1.16
LTBP4-227	ENST00000600026	GSTA5	Q7RTV2	222 aa		22.31	■■□□□ 1.16
LTBP4-227	ENST00000600026	CAMKK1	Q8N5S9	505 aa		22.31	■■□□□ 1.16
LTBP4-227	ENST00000600026	LRRN4	Q8WUT4	740 aa		22.31	■■□□□ 1.16
LTBP4-227	ENST00000600026	HTR3C	Q8WXA8	447 aa		22.31	■■□□□ 1.16
LTBP4-227	ENST00000600026	FATE1	Q969F0	183 aa		22.31	■■□□□ 1.16
LTBP4-227	ENST00000600026	CEP44	Q9C0F1	390 aa		22.31	■■□□□ 1.16
LTBP4-227	ENST00000600026	SEPT10	Q9P0V9	454 aa		22.31	■■□□□ 1.16
LTBP4-227	ENST00000600026	KCNN4	O15554	427 aa		22.3	■■□□□ 1.16
LTBP4-227	ENST00000600026	TMCC1	O94876	653 aa		22.3	■■□□□ 1.16
LTBP4-227	ENST00000600026	KCNJ1	P48048	391 aa		22.3	■■□□□ 1.16
LTBP4-227	ENST00000600026	COPA	P53621	1224 aa		22.3	■■□□□ 1.16
LTBP4-227	ENST00000600026	DMWD	Q09019	674 aa		22.3	■■□□□ 1.16
LTBP4-227	ENST00000600026	INO80D	Q53TQ3	878 aa	Predicted RBP	22.3	■■□□□ 1.16
LTBP4-227	ENST00000600026	C9orf64	Q5T6V5	341 aa		22.3	■■□□□ 1.16
LTBP4-227	ENST00000600026	TMCO4	Q5TGY1	634 aa		22.3	■■□□□ 1.16
LTBP4-227	ENST00000600026	ANO7	Q6IWH7	933 aa		22.3	■■□□□ 1.16
LTBP4-227	ENST00000600026	METTL3	Q86U44	580 aa	Known RBP	22.3	■■□□□ 1.16
LTBP4-227	ENST00000600026	BBS5	Q8N3I7	341 aa		22.3	■■□□□ 1.16
LTBP4-227	ENST00000600026	OR2T3	Q8NH03	318 aa		22.3	■■□□□ 1.16

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms