RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 ITKQ08881 620 aa22.22■■□□□ 1.15
LTBP4-224ENST00000599016 FNDC3BQ53EP0 1204 aaKnown RBP22.22■■□□□ 1.15
LTBP4-224ENST00000599016 GLE1Q53GS7 698 aaKnown RBP22.22■■□□□ 1.15
LTBP4-224ENST00000599016 FSTL4Q6MZW2 842 aa22.22■■□□□ 1.15
LTBP4-224ENST00000599016 JAMLQ86YT9 394 aa22.22■■□□□ 1.15
LTBP4-224ENST00000599016 NOA1Q8NC60 698 aaKnown RBP22.22■■□□□ 1.15
LTBP4-224ENST00000599016 CCDC110Q8TBZ0 833 aa22.22■■□□□ 1.15
LTBP4-224ENST00000599016 ISG20Q96AZ6 181 aaKnown RBP22.22■■□□□ 1.15
LTBP4-224ENST00000599016 MRGPRX3Q96LB0 322 aa22.22■■□□□ 1.15
LTBP4-224ENST00000599016 PSKH2Q96QS6 385 aa22.22■■□□□ 1.15
LTBP4-224ENST00000599016 KCNH6Q9H252 994 aa22.22■■□□□ 1.15
LTBP4-224ENST00000599016 THAP10Q9P2Z0 257 aaPredicted RBP22.22■■□□□ 1.15
LTBP4-224ENST00000599016 ATP8A1Q9Y2Q0 1164 aa22.22■■□□□ 1.15
LTBP4-224ENST00000599016 FCF1Q9Y324 198 aaKnown RBP22.22■■□□□ 1.15
LTBP4-224ENST00000599016 TTLL3Q9Y4R7 772 aa22.22■■□□□ 1.15
LTBP4-224ENST00000599016 K7ERQ8 282 aa22.21■■□□□ 1.15
LTBP4-224ENST00000599016 RAD51CO43502 376 aa22.21■■□□□ 1.15
LTBP4-224ENST00000599016 ATP9BO43861 1147 aa22.21■■□□□ 1.15
LTBP4-224ENST00000599016 EGFP01133 1207 aa22.21■■□□□ 1.15
LTBP4-224ENST00000599016 HLA-DQB2P05538 268 aa22.21■■□□□ 1.15
LTBP4-224ENST00000599016 ETS1P14921 441 aa22.21■■□□□ 1.15
LTBP4-224ENST00000599016 PTK6Q13882 451 aa22.21■■□□□ 1.15
LTBP4-224ENST00000599016 TRIP13Q15645 432 aaPredicted RBP22.21■■□□□ 1.15
LTBP4-224ENST00000599016 DLG2Q15700 870 aa22.21■■□□□ 1.15
LTBP4-224ENST00000599016 PTPRNQ16849 979 aa22.21■■□□□ 1.15
LTBP4-224ENST00000599016 FBXO43Q4G163 708 aa22.21■■□□□ 1.15
LTBP4-224ENST00000599016 C22orf39Q6P5X5 142 aa22.21■■□□□ 1.15
LTBP4-224ENST00000599016 SFTPA1Q8IWL2 248 aa22.21■■□□□ 1.15
LTBP4-224ENST00000599016 PCDH20Q8N6Y1 951 aaKnown RBP22.21■■□□□ 1.15
LTBP4-224ENST00000599016 KCNV2Q8TDN2 545 aa22.21■■□□□ 1.15
LTBP4-224ENST00000599016 POLR1EQ9GZS1 481 aaKnown RBP22.21■■□□□ 1.15
LTBP4-224ENST00000599016 ASIC3Q9UHC3 531 aa22.21■■□□□ 1.15
LTBP4-224ENST00000599016 RSPH14Q9UHP6 348 aa22.21■■□□□ 1.15
LTBP4-224ENST00000599016 SLCO3A1Q9UIG8 710 aa22.21■■□□□ 1.15
LTBP4-224ENST00000599016 K7EQS6 105 aa22.2■■□□□ 1.14
LTBP4-224ENST00000599016 ZBTB24O43167 697 aaPredicted RBP22.2■■□□□ 1.14
LTBP4-224ENST00000599016 SMAD6O43541 496 aaKnown RBP22.2■■□□□ 1.14
LTBP4-224ENST00000599016 HNRNPLP14866 589 aaKnown RBP eCLIP22.2■■□□□ 1.14
LTBP4-224ENST00000599016 CES1P23141 567 aa22.2■■□□□ 1.14
LTBP4-224ENST00000599016 RPL22P35268 128 aaKnown RBP22.2■■□□□ 1.14
LTBP4-224ENST00000599016 NRLP54845 237 aa22.2■■□□□ 1.14
LTBP4-224ENST00000599016 SEC13P55735 322 aa22.2■■□□□ 1.14
LTBP4-224ENST00000599016 ZNF234Q14588 700 aa22.2■■□□□ 1.14
LTBP4-224ENST00000599016 CNTD1Q8N815 330 aa22.2■■□□□ 1.14
LTBP4-224ENST00000599016 ZNF513Q8N8E2 541 aaPredicted RBP22.2■■□□□ 1.14
LTBP4-224ENST00000599016 TSEN2Q8NCE0 465 aaKnown RBP22.2■■□□□ 1.14
LTBP4-224ENST00000599016 PPP1R2P1Q96PQ5 205 aa22.2■■□□□ 1.14
LTBP4-224ENST00000599016 LRRC1Q9BTT6 524 aa22.2■■□□□ 1.14
LTBP4-224ENST00000599016 RAB17Q9H0T7 212 aa22.2■■□□□ 1.14
LTBP4-224ENST00000599016 GLOD4Q9HC38 313 aa22.2■■□□□ 1.14
LTBP4-224ENST00000599016 LHX3Q9UBR4 397 aa22.2■■□□□ 1.14
LTBP4-224ENST00000599016 NDRG2Q9UN36 371 aaKnown RBP22.2■■□□□ 1.14
LTBP4-224ENST00000599016 MUC22E2RYF6 1773 aaPredicted RBP22.2■■□□□ 1.14
LTBP4-224ENST00000599016 IGSF6O95976 241 aa22.19■■□□□ 1.14
LTBP4-224ENST00000599016 GSRP00390 522 aa22.19■■□□□ 1.14
LTBP4-224ENST00000599016 ZSCAN5DPP0CG00 497 aa22.19■■□□□ 1.14
LTBP4-224ENST00000599016 NFKB1P19838 968 aa22.19■■□□□ 1.14
LTBP4-224ENST00000599016 FDFT1P37268 417 aa22.19■■□□□ 1.14
LTBP4-224ENST00000599016 RECQLP46063 649 aaPredicted RBP22.19■■□□□ 1.14
LTBP4-224ENST00000599016 STARD6P59095 220 aa22.19■■□□□ 1.14
LTBP4-224ENST00000599016 SNRPD1P62314 119 aaKnown RBP22.19■■□□□ 1.14
LTBP4-224ENST00000599016 NSUN2Q08J23 767 aaKnown RBP eCLIP22.19■■□□□ 1.14
LTBP4-224ENST00000599016 PRPSAP1Q14558 356 aa22.19■■□□□ 1.14
LTBP4-224ENST00000599016 PARP6Q2NL67 630 aa22.19■■□□□ 1.14
LTBP4-224ENST00000599016 TEX35Q5T0J7 233 aa22.19■■□□□ 1.14
LTBP4-224ENST00000599016 EGFLAMQ63HQ2 1017 aa22.19■■□□□ 1.14
LTBP4-224ENST00000599016 SDE2Q6IQ49 451 aa22.19■■□□□ 1.14
LTBP4-224ENST00000599016 SERPINA13PQ6UXR4 307 aa22.19■■□□□ 1.14
LTBP4-224ENST00000599016 TRMT11Q7Z4G4 463 aaKnown RBP22.19■■□□□ 1.14
LTBP4-224ENST00000599016 PRUNE1Q86TP1 453 aa22.19■■□□□ 1.14
LTBP4-224ENST00000599016 GLIS1Q8NBF1 620 aa22.19■■□□□ 1.14
LTBP4-224ENST00000599016 LRRC45Q96CN5 670 aa22.19■■□□□ 1.14
LTBP4-224ENST00000599016 NELL2Q99435 816 aa22.19■■□□□ 1.14
LTBP4-224ENST00000599016 MGME1Q9BQP7 344 aa22.19■■□□□ 1.14
LTBP4-224ENST00000599016 TRIM51Q9BSJ1 452 aa22.19■■□□□ 1.14
LTBP4-224ENST00000599016 GBA3Q9H227 469 aa22.19■■□□□ 1.14
LTBP4-224ENST00000599016 SUN2Q9UH99 717 aa22.19■■□□□ 1.14
LTBP4-224ENST00000599016 UTP11Q9Y3A2 253 aaKnown RBP22.19■■□□□ 1.14
LTBP4-224ENST00000599016 NEU2Q9Y3R4 380 aa22.19■■□□□ 1.14
LTBP4-224ENST00000599016 ATG2BQ96BY7 2078 aa22.18■■□□□ 1.14
LTBP4-224ENST00000599016 GOLGA6CA6NDK9 693 aa22.18■■□□□ 1.14
LTBP4-224ENST00000599016 GOLGA6BA6NDN3 693 aa22.18■■□□□ 1.14
LTBP4-224ENST00000599016 SHISA7A6NL88 538 aa22.18■■□□□ 1.14
LTBP4-224ENST00000599016 EFCAB8A8MWE9 144 aa22.18■■□□□ 1.14
LTBP4-224ENST00000599016 TTC34A8MYJ7 566 aa22.18■■□□□ 1.14
LTBP4-224ENST00000599016 GOLGA6DP0CG33 693 aa22.18■■□□□ 1.14
LTBP4-224ENST00000599016 CD72P21854 359 aa22.18■■□□□ 1.14
LTBP4-224ENST00000599016 TIE1P35590 1138 aa22.18■■□□□ 1.14
LTBP4-224ENST00000599016 ADCY8P40145 1251 aa22.18■■□□□ 1.14
LTBP4-224ENST00000599016 KIR2DL1P43626 348 aaPredicted RBP22.18■■□□□ 1.14
LTBP4-224ENST00000599016 VPS41P49754 854 aa22.18■■□□□ 1.14
LTBP4-224ENST00000599016 MAXP61244 160 aa22.18■■□□□ 1.14
LTBP4-224ENST00000599016 MRPS21P82921 87 aaKnown RBP22.18■■□□□ 1.14
LTBP4-224ENST00000599016 GPS1Q13098 491 aa22.18■■□□□ 1.14
LTBP4-224ENST00000599016 LRRC32Q14392 662 aa22.18■■□□□ 1.14
LTBP4-224ENST00000599016 RALGPS1Q5JS13 557 aa22.18■■□□□ 1.14
LTBP4-224ENST00000599016 DGKKQ5KSL6 1271 aa22.18■■□□□ 1.14
LTBP4-224ENST00000599016 EMC10Q5UCC4 262 aa22.18■■□□□ 1.14
LTBP4-224ENST00000599016 SIX5Q8N196 739 aa22.18■■□□□ 1.14
LTBP4-224ENST00000599016 PGBD5Q8N414 524 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms