RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 WBP2Q969T9 261 aa17.3■□□□□ 0.36
SHKBP1-216ENST00000598201 IMP4Q96G21 291 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-216ENST00000598201 RMDN2Q96LZ7 410 aa17.3■□□□□ 0.36
SHKBP1-216ENST00000598201 C20orf96Q9NUD7 363 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-216ENST00000598201 TRPM5Q9NZQ8 1165 aa17.3■□□□□ 0.36
SHKBP1-216ENST00000598201 URODP06132 367 aa17.29■□□□□ 0.36
SHKBP1-216ENST00000598201 MMP2P08253 660 aa17.29■□□□□ 0.36
SHKBP1-216ENST00000598201 MYOGP15173 224 aa17.29■□□□□ 0.36
SHKBP1-216ENST00000598201 BGNP21810 368 aa17.29■□□□□ 0.36
SHKBP1-216ENST00000598201 CRHR1P34998 444 aa17.29■□□□□ 0.36
SHKBP1-216ENST00000598201 ABCG1P45844 678 aa17.29■□□□□ 0.36
SHKBP1-216ENST00000598201 MAPKAPK2P49137 400 aa17.29■□□□□ 0.36
SHKBP1-216ENST00000598201 WNT3AP56704 352 aa17.29■□□□□ 0.36
SHKBP1-216ENST00000598201 DSC2Q02487 901 aa17.29■□□□□ 0.36
SHKBP1-216ENST00000598201 TWF1Q12792 350 aa17.29■□□□□ 0.36
SHKBP1-216ENST00000598201 PARP15Q460N3 678 aa17.29■□□□□ 0.36
SHKBP1-216ENST00000598201 PKN3Q6P5Z2 889 aa17.29■□□□□ 0.36
SHKBP1-216ENST00000598201 TRPM8Q7Z2W7 1104 aa17.29■□□□□ 0.36
SHKBP1-216ENST00000598201 STRA8Q7Z7C7 330 aa17.29■□□□□ 0.36
SHKBP1-216ENST00000598201 TEX26Q8N6G2 289 aa17.29■□□□□ 0.36
SHKBP1-216ENST00000598201 ARMC2Q8NEN0 867 aa17.29■□□□□ 0.36
SHKBP1-216ENST00000598201 OR52K2Q8NGK3 314 aa17.29■□□□□ 0.36
SHKBP1-216ENST00000598201 ATP2A3Q93084 1043 aa17.29■□□□□ 0.36
SHKBP1-216ENST00000598201 MECRQ9BV79 373 aa17.29■□□□□ 0.36
SHKBP1-216ENST00000598201 FSD1LQ9BXM9 530 aa17.29■□□□□ 0.36
SHKBP1-216ENST00000598201 ENTPD7Q9NQZ7 604 aa17.29■□□□□ 0.36
SHKBP1-216ENST00000598201 A0A0D9SEW6 157 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 STC2O76061 302 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 GMPRP36959 345 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 ETFBP38117 255 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 CD86P42081 329 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 HARS2P49590 506 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 RPS24P62847 133 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 ITKQ08881 620 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 MPP3Q13368 585 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 PDE1CQ14123 709 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 PCID2Q5JVF3 399 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 GRTP1Q5TC63 336 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 C10orf67Q8IYJ2 551 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 ATXN7L3BQ96GX2 97 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 PRICKLE1Q96MT3 831 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 RBBP8Q99708 897 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 PBX4Q9BYU1 374 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 KDM4CQ9H3R0 1056 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 IARS2Q9NSE4 1012 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 TXNDC16Q9P2K2 825 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 ZFP37Q9Y6Q3 630 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 LCHNA4D1U4 455 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 PRRG1O14668 218 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 GJB3O75712 270 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 PBX2P40425 430 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 SLC11A2P49281 568 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 SGSHP51688 502 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 PDE1BQ01064 536 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 IL10RBQ08334 325 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 TAF12Q16514 161 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 LACTB2Q53H82 288 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 PPM1JQ5JR12 505 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 DNAJB7Q7Z6W7 309 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 TMEM150AQ86TG1 271 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 FIBCD1Q8N539 461 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 SP7Q8TDD2 431 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 TRMT2BQ96GJ1 504 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 PPP1R2P1Q96PQ5 205 aa17.28■□□□□ 0.36
SHKBP1-216ENST00000598201 H3BNC9 293 aa17.27■□□□□ 0.36
SHKBP1-216ENST00000598201 SPATA31D3P0C874 917 aa17.27■□□□□ 0.36
SHKBP1-216ENST00000598201 IRF1P10914 325 aa17.27■□□□□ 0.36
SHKBP1-216ENST00000598201 CHRM1P11229 460 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-216ENST00000598201 CORO1AP31146 461 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-216ENST00000598201 YBEYP58557 167 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-216ENST00000598201 TNK2Q07912 1038 aa17.27■□□□□ 0.36
SHKBP1-216ENST00000598201 MTA1Q13330 715 aa17.27■□□□□ 0.36
SHKBP1-216ENST00000598201 SPATA31D4Q6ZUB0 917 aa17.27■□□□□ 0.36
SHKBP1-216ENST00000598201 DCLK2Q8N568 766 aa17.27■□□□□ 0.36
SHKBP1-216ENST00000598201 SLC25A41Q8N5S1 370 aa17.27■□□□□ 0.36
SHKBP1-216ENST00000598201 ACMSDQ8TDX5 336 aa17.27■□□□□ 0.36
SHKBP1-216ENST00000598201 MCMBPQ9BTE3 642 aa17.27■□□□□ 0.36
SHKBP1-216ENST00000598201 SLC2A6Q9UGQ3 507 aa17.27■□□□□ 0.36
SHKBP1-216ENST00000598201 MYLKQ15746 1914 aa17.27■□□□□ 0.36
SHKBP1-216ENST00000598201 MUSKO15146 869 aa17.27■□□□□ 0.35
SHKBP1-216ENST00000598201 TEX28O15482 410 aa17.27■□□□□ 0.35
SHKBP1-216ENST00000598201 PRAMEF11O60813 436 aa17.27■□□□□ 0.35
SHKBP1-216ENST00000598201 ARNTP27540 789 aa17.27■□□□□ 0.35
SHKBP1-216ENST00000598201 LIMK2P53671 638 aa17.27■□□□□ 0.35
SHKBP1-216ENST00000598201 OVGP1Q12889 678 aa17.27■□□□□ 0.35
SHKBP1-216ENST00000598201 LRIT3Q3SXY7 679 aa17.27■□□□□ 0.35
SHKBP1-216ENST00000598201 CES4AQ5XG92 561 aa17.27■□□□□ 0.35
SHKBP1-216ENST00000598201 FSTL4Q6MZW2 842 aa17.27■□□□□ 0.35
SHKBP1-216ENST00000598201 ESRP1Q6NXG1 681 aaKnown RBP17.27■□□□□ 0.35
SHKBP1-216ENST00000598201 C16orf46Q6P387 395 aa17.27■□□□□ 0.35
SHKBP1-216ENST00000598201 CMC1Q7Z7K0 106 aa17.27■□□□□ 0.35
SHKBP1-216ENST00000598201 ACVR1CQ8NER5 493 aa17.27■□□□□ 0.35
SHKBP1-216ENST00000598201 OR7D4Q8NG98 312 aa17.27■□□□□ 0.35
SHKBP1-216ENST00000598201 ARRDC2Q8TBH0 407 aa17.27■□□□□ 0.35
SHKBP1-216ENST00000598201 PLD4Q96BZ4 506 aa17.27■□□□□ 0.35
SHKBP1-216ENST00000598201 KLF16Q9BXK1 252 aaPredicted RBP17.27■□□□□ 0.35
SHKBP1-216ENST00000598201 ZNF334Q9HCZ1 680 aaPredicted RBP17.27■□□□□ 0.35
SHKBP1-216ENST00000598201 ATP13A1Q9HD20 1204 aa17.27■□□□□ 0.35
SHKBP1-216ENST00000598201 KLHL14Q9P2G3 628 aa17.27■□□□□ 0.35
SHKBP1-216ENST00000598201 MSRAQ9UJ68 235 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms