RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 OR14C36Q8NHC7 312 aa21.47■■□□□ 1.03
PNKP-209ENST00000596726 CASKIN2Q8WXE0 1202 aa21.47■■□□□ 1.03
PNKP-209ENST00000596726 ARRDC3Q96B67 414 aa21.47■■□□□ 1.03
PNKP-209ENST00000596726 HEPHQ9BQS7 1158 aa21.47■■□□□ 1.03
PNKP-209ENST00000596726 MIR1-1HGQ9H1L0 117 aa21.47■■□□□ 1.03
PNKP-209ENST00000596726 OSGEPQ9NPF4 335 aa21.47■■□□□ 1.03
PNKP-209ENST00000596726 TMEM9BQ9NQ34 198 aa21.47■■□□□ 1.03
PNKP-209ENST00000596726 SLCO1B1Q9Y6L6 691 aa21.47■■□□□ 1.03
PNKP-209ENST00000596726 FAM47DPA6NHR8 397 aa21.46■■□□□ 1.03
PNKP-209ENST00000596726 C4orf47A7E2U8 309 aa21.46■■□□□ 1.03
PNKP-209ENST00000596726 H3BRJ5 948 aa21.46■■□□□ 1.03
PNKP-209ENST00000596726 ARHGAP33O14559 1287 aa21.46■■□□□ 1.03
PNKP-209ENST00000596726 DAPK3O43293 454 aa21.46■■□□□ 1.03
PNKP-209ENST00000596726 PLRG1O43660 514 aaKnown RBP21.46■■□□□ 1.03
PNKP-209ENST00000596726 BUB1O43683 1085 aa21.46■■□□□ 1.03
PNKP-209ENST00000596726 LEFTY1O75610 366 aa21.46■■□□□ 1.03
PNKP-209ENST00000596726 GSRP00390 522 aa21.46■■□□□ 1.03
PNKP-209ENST00000596726 CD27P26842 260 aa21.46■■□□□ 1.03
PNKP-209ENST00000596726 CCR5P51681 352 aa21.46■■□□□ 1.03
PNKP-209ENST00000596726 CCNHP51946 323 aaPredicted RBP21.46■■□□□ 1.03
PNKP-209ENST00000596726 POM121L1PQ3SYA9 428 aa21.46■■□□□ 1.03
PNKP-209ENST00000596726 PIP5KL1Q5T9C9 394 aa21.46■■□□□ 1.03
PNKP-209ENST00000596726 ZNF354CQ86Y25 554 aa21.46■■□□□ 1.03
PNKP-209ENST00000596726 CPNE8Q86YQ8 564 aa21.46■■□□□ 1.03
PNKP-209ENST00000596726 FAM71BQ8TC56 605 aa21.46■■□□□ 1.03
PNKP-209ENST00000596726 SNX19Q92543 992 aa21.46■■□□□ 1.03
PNKP-209ENST00000596726 HSPH1Q92598 858 aa21.46■■□□□ 1.03
PNKP-209ENST00000596726 VOPP1Q96AW1 172 aa21.46■■□□□ 1.03
PNKP-209ENST00000596726 CELF6Q96J87 481 aaKnown RBP21.46■■□□□ 1.03
PNKP-209ENST00000596726 TM6SF2Q9BZW4 377 aa21.46■■□□□ 1.03
PNKP-209ENST00000596726 PDFQ9HBH1 243 aa21.46■■□□□ 1.03
PNKP-209ENST00000596726 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.46■■□□□ 1.03
PNKP-209ENST00000596726 HECAQ9UBI9 543 aaPredicted RBP21.46■■□□□ 1.03
PNKP-209ENST00000596726 LCMT1Q9UIC8 334 aa21.46■■□□□ 1.03
PNKP-209ENST00000596726 CACNA1AO00555 2505 aa21.46■■□□□ 1.03
PNKP-209ENST00000596726 KPNA3O00505 521 aaPredicted RBP21.45■■□□□ 1.02
PNKP-209ENST00000596726 TMCC1O94876 653 aa21.45■■□□□ 1.02
PNKP-209ENST00000596726 SYPP08247 313 aa21.45■■□□□ 1.02
PNKP-209ENST00000596726 DNA2P51530 1060 aa21.45■■□□□ 1.02
PNKP-209ENST00000596726 TAS2R38P59533 333 aa21.45■■□□□ 1.02
PNKP-209ENST00000596726 NPWQ8N729 165 aa21.45■■□□□ 1.02
PNKP-209ENST00000596726 OR2AP1Q8NGE2 309 aa21.45■■□□□ 1.02
PNKP-209ENST00000596726 GRIN3AQ8TCU5 1115 aa21.45■■□□□ 1.02
PNKP-209ENST00000596726 TSC1Q92574 1164 aa21.45■■□□□ 1.02
PNKP-209ENST00000596726 HDAC8Q9BY41 377 aa21.45■■□□□ 1.02
PNKP-209ENST00000596726 EBF2Q9HAK2 575 aa21.45■■□□□ 1.02
PNKP-209ENST00000596726 PCDH18Q9HCL0 1135 aa21.45■■□□□ 1.02
PNKP-209ENST00000596726 TPX2Q9ULW0 747 aaKnown RBP21.45■■□□□ 1.02
PNKP-209ENST00000596726 KNL1Q8NG31 2342 aa21.44■■□□□ 1.02
PNKP-209ENST00000596726 A0A1W2PPC4 97 aa21.44■■□□□ 1.02
PNKP-209ENST00000596726 ARHGAP42A6NI28 874 aa21.44■■□□□ 1.02
PNKP-209ENST00000596726 J3KR12 359 aa21.44■■□□□ 1.02
PNKP-209ENST00000596726 PRAMEF11O60813 436 aa21.44■■□□□ 1.02
PNKP-209ENST00000596726 MTA2O94776 668 aa21.44■■□□□ 1.02
PNKP-209ENST00000596726 MAN1A1P33908 653 aa21.44■■□□□ 1.02
PNKP-209ENST00000596726 ARL4AP40617 200 aa21.44■■□□□ 1.02
PNKP-209ENST00000596726 PAPOLAP51003 745 aaKnown RBP21.44■■□□□ 1.02
PNKP-209ENST00000596726 ARSEP51690 589 aa21.44■■□□□ 1.02
PNKP-209ENST00000596726 SNRPD1P62314 119 aaKnown RBP21.44■■□□□ 1.02
PNKP-209ENST00000596726 CYTH1Q15438 398 aa21.44■■□□□ 1.02
PNKP-209ENST00000596726 HADHQ16836 314 aaKnown RBP21.44■■□□□ 1.02
PNKP-209ENST00000596726 ERMP1Q7Z2K6 904 aa21.44■■□□□ 1.02
PNKP-209ENST00000596726 DGLUCYQ7Z3D6 616 aa21.44■■□□□ 1.02
PNKP-209ENST00000596726 LZTR1Q8N653 840 aa21.44■■□□□ 1.02
PNKP-209ENST00000596726 SLC35G2Q8TBE7 412 aa21.44■■□□□ 1.02
PNKP-209ENST00000596726 LRIG1Q96JA1 1093 aa21.44■■□□□ 1.02
PNKP-209ENST00000596726 CSPG4P5Q96PW8 444 aa21.44■■□□□ 1.02
PNKP-209ENST00000596726 TM9SF3Q9HD45 589 aa21.44■■□□□ 1.02
PNKP-209ENST00000596726 INTUQ9ULD6 942 aa21.44■■□□□ 1.02
PNKP-209ENST00000596726 TBC1D3DA0A087WVF3 549 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 TBC1D3IA0A087WXS9 549 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 TBC1D3EA0A087X179 549 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 TBC1D3KA0A087X1G2 549 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 DCDC2BA2VCK2 349 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 TBC1D3FA6NER0 549 aaPredicted RBP21.43■■□□□ 1.02
PNKP-209ENST00000596726 TBC1D3LB9A6J9 549 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 LATO43561 262 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 TBC1D3HP0C7X1 549 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 AMPD1P23109 780 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 IL4RP24394 825 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 MAPK8P45983 427 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 TAS2R40P59535 323 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 PPP2CBP62714 309 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 PPP2CAP67775 309 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 BNC1Q01954 994 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 CCDC15Q0P6D6 951 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 TCEAL1Q15170 157 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 MYLK3Q32MK0 819 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 TBC1D3GQ6DHY5 549 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 TBC1D3CQ6IPX1 549 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 ERN2Q76MJ5 926 aaKnown RBP21.43■■□□□ 1.02
PNKP-209ENST00000596726 TBC1D3Q8IZP1 549 aaPredicted RBP21.43■■□□□ 1.02
PNKP-209ENST00000596726 ZDHHC5Q9C0B5 715 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 ETNK2Q9NVF9 386 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 RCOR3Q9P2K3 495 aaPredicted RBP21.43■■□□□ 1.02
PNKP-209ENST00000596726 UBA2Q9UBT2 640 aaPredicted RBP21.43■■□□□ 1.02
PNKP-209ENST00000596726 MFHAS1Q9Y4C4 1052 aa21.43■■□□□ 1.02
PNKP-209ENST00000596726 TP53BP1Q12888 1972 aaPredicted RBP21.43■■□□□ 1.02
PNKP-209ENST00000596726 CNOT1A5YKK6 2376 aaKnown RBP21.43■■□□□ 1.02
PNKP-209ENST00000596726 LCA5LO95447 670 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms