RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 FZD2Q14332 565 aa16.22■□□□□ 0.19
GTF2F1-203ENST00000594213 VWA3BQ502W6 1294 aa16.22■□□□□ 0.19
GTF2F1-203ENST00000594213 FAM102AQ5T9C2 384 aaPredicted RBP16.22■□□□□ 0.19
GTF2F1-203ENST00000594213 KLHDC7AQ5VTJ3 777 aa16.22■□□□□ 0.19
GTF2F1-203ENST00000594213 RETSATQ6NUM9 610 aa16.22■□□□□ 0.19
GTF2F1-203ENST00000594213 KYAT3Q6YP21 454 aaKnown RBP16.22■□□□□ 0.19
GTF2F1-203ENST00000594213 KDM7AQ6ZMT4 941 aa16.22■□□□□ 0.19
GTF2F1-203ENST00000594213 PLPP6Q8IY26 295 aa16.22■□□□□ 0.19
GTF2F1-203ENST00000594213 PCDH20Q8N6Y1 951 aaKnown RBP16.22■□□□□ 0.19
GTF2F1-203ENST00000594213 LSM14AQ8ND56 463 aaKnown RBP16.22■□□□□ 0.19
GTF2F1-203ENST00000594213 SLC39A7Q92504 469 aa16.22■□□□□ 0.19
GTF2F1-203ENST00000594213 HIC2Q96JB3 615 aa16.22■□□□□ 0.19
GTF2F1-203ENST00000594213 APOLD1Q96LR9 279 aa16.22■□□□□ 0.19
GTF2F1-203ENST00000594213 KLF6Q99612 283 aaPredicted RBP16.22■□□□□ 0.19
GTF2F1-203ENST00000594213 HEPHQ9BQS7 1158 aa16.22■□□□□ 0.19
GTF2F1-203ENST00000594213 SPON2Q9BUD6 331 aa16.22■□□□□ 0.19
GTF2F1-203ENST00000594213 C1QTNF2Q9BXJ5 285 aa16.22■□□□□ 0.19
GTF2F1-203ENST00000594213 SLC17A9Q9BYT1 436 aa16.22■□□□□ 0.19
GTF2F1-203ENST00000594213 PPARGC1AQ9UBK2 798 aaKnown RBP16.22■□□□□ 0.19
GTF2F1-203ENST00000594213 FHOD1Q9Y613 1164 aa16.22■□□□□ 0.19
GTF2F1-203ENST00000594213 CXorf51AA0A1B0GTR3 108 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 A6NNZ2 444 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 K7ESM1 405 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 SRGAP2O75044 1071 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 DXOO77932 396 aaKnown RBP16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 LSM8O95777 96 aaKnown RBP16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 PAK4O96013 591 aaPredicted RBP16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 CSF2P04141 144 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 GP1BAP07359 652 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 MYF5P13349 255 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 RECQLP46063 649 aaPredicted RBP16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 RPS21P63220 83 aaKnown RBP16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 GNA12Q03113 381 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 C2CD6Q53TS8 623 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 ZNF542PQ5EBM4 170 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 CARD16Q5EG05 197 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 MANEALQ5VSG8 457 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 KIAA1161Q6NSJ0 714 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 TMC6Q7Z403 805 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 SPACA3Q8IXA5 215 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 ISG20Q96AZ6 181 aaKnown RBP16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 PPP1R16AQ96I34 528 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 FEM1CQ96JP0 617 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 CFAP57Q96MR6 1250 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 LENG8Q96PV6 779 aaPredicted RBP16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 ZYG11BQ9C0D3 744 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 USP29Q9HBJ7 922 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 KLF15Q9UIH9 416 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 ACTL7AQ9Y615 435 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 ZNF462Q96JM2 2506 aa16.21■□□□□ 0.19
GTF2F1-203ENST00000594213 SETXQ7Z333 2677 aaKnown RBP16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 SPTY2D1-AS1A0A0U1RR47 76 aa16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 NEMP2A6NFY4 417 aa16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 NME1P15531 152 aaKnown RBP16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 CCNHP51946 323 aaPredicted RBP16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 HNRNPKP61978 463 aaKnown RBP eCLIP16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 UBE2HP62256 183 aa16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 NRG1Q02297 640 aaPredicted RBP16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 RAB6CQ53S08 254 aa16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 TPRG1LQ5T0D9 272 aa16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 PCSK4Q6UW60 755 aa16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 PARS2Q7L3T8 475 aaKnown RBP16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 NOP9Q86U38 636 aaKnown RBP16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 FAM131BQ86XD5 332 aa16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 ASB12Q8WXK4 309 aa16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 FCRL3Q96P31 734 aaPredicted RBP16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 TUBGCP2Q9BSJ2 902 aa16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 DUSP23Q9BVJ7 150 aa16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 RAB6CQ9H0N0 254 aa16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 ATP13A1Q9HD20 1204 aa16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 DNAJC28Q9NX36 388 aa16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 FCF1Q9Y324 198 aaKnown RBP16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 CSNK1G3Q9Y6M4 447 aa16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 ATMQ13315 3056 aa16.2■□□□□ 0.18
GTF2F1-203ENST00000594213 GOLGA8SH3BPF8 625 aa16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 SPINT1O43278 529 aa16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 NEBLO76041 1014 aa16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 ALPPL2P10696 532 aa16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 UCHL3P15374 230 aa16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 ACVRL1P37023 503 aa16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 LSSP48449 732 aa16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 NOMO3P69849 1222 aa16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 CCDC173Q0VFZ6 552 aa16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 MAPK8IP2Q13387 824 aaPredicted RBP16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 RAPGEF1Q13905 1077 aa16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 HS1BP3Q53T59 392 aa16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 TAF3Q5VWG9 929 aa16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 GPR155Q7Z3F1 870 aa16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 PTAR1Q7Z6K3 402 aaPredicted RBP16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 ZSCAN30Q86W11 494 aa16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 NLRP14Q86W24 1093 aa16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 ZNF548Q8NEK5 533 aaPredicted RBP16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 CPA5Q8WXQ8 436 aa16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 ZNF578Q96N58 590 aaPredicted RBP16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 PDCL3Q9H2J4 239 aa16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 NDFIP2Q9NV92 336 aa16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 NEU3Q9UQ49 428 aa16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 MYLKQ15746 1914 aa16.19■□□□□ 0.18
GTF2F1-203ENST00000594213 TEX51A0A1B0GUA7 166 aa16.18■□□□□ 0.18
GTF2F1-203ENST00000594213 FAM170AA1A519 330 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms