RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 ZNF235Q14590 738 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 RFTN1Q14699 578 aaPredicted RBP15.43■□□□□ 0.06
VRK3-207ENST00000594092 CCDC38Q502W7 563 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 ATAT1Q5SQI0 421 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 LY6G5CQ5SRR4 150 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 DCAF4L2Q8NA75 395 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 ATP11CQ8NB49 1132 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 IMP4Q96G21 291 aaKnown RBP15.43■□□□□ 0.06
VRK3-207ENST00000594092 LMLNQ96KR4 655 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 SIGLEC10Q96LC7 697 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 PPP1R2P1Q96PQ5 205 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 BBS2Q9BXC9 721 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 LRRC40Q9H9A6 602 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 VPS37BQ9H9H4 285 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 TRPV4Q9HBA0 871 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 LRRC4CQ9HCJ2 640 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 CLDND1Q9NY35 253 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 KIAA1522Q9P206 1035 aaPredicted RBP15.43■□□□□ 0.06
VRK3-207ENST00000594092 VPS51Q9UID3 782 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 CDH7Q9ULB5 785 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 CHMP2BQ9UQN3 213 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 COLQQ9Y215 455 aaPredicted RBP15.43■□□□□ 0.06
VRK3-207ENST00000594092 SMIM23A6NLE4 172 aa15.42■□□□□ 0.06
VRK3-207ENST00000594092 NEDD8-MDP1E9PL57 170 aa15.42■□□□□ 0.06
VRK3-207ENST00000594092 USP12O75317 370 aa15.42■□□□□ 0.06
VRK3-207ENST00000594092 CD160O95971 181 aa15.42■□□□□ 0.06
VRK3-207ENST00000594092 TSHRP16473 764 aa15.42■□□□□ 0.06
VRK3-207ENST00000594092 CD70P32970 193 aa15.42■□□□□ 0.06
VRK3-207ENST00000594092 PHBP35232 272 aa15.42■□□□□ 0.06
VRK3-207ENST00000594092 DSC2Q02487 901 aa15.42■□□□□ 0.06
VRK3-207ENST00000594092 STAT4Q14765 748 aa15.42■□□□□ 0.06
VRK3-207ENST00000594092 CES5AQ6NT32 575 aa15.42■□□□□ 0.06
VRK3-207ENST00000594092 PRPF39Q86UA1 669 aaKnown RBP15.42■□□□□ 0.06
VRK3-207ENST00000594092 APCDD1Q8J025 514 aa15.42■□□□□ 0.06
VRK3-207ENST00000594092 ARRDC2Q8TBH0 407 aa15.42■□□□□ 0.06
VRK3-207ENST00000594092 EPS8L3Q8TE67 593 aaKnown RBP15.42■□□□□ 0.06
VRK3-207ENST00000594092 OSCP1Q8WVF1 389 aa15.42■□□□□ 0.06
VRK3-207ENST00000594092 LRRC39Q96DD0 335 aa15.42■□□□□ 0.06
VRK3-207ENST00000594092 PGM2Q96G03 612 aa15.42■□□□□ 0.06
VRK3-207ENST00000594092 PIH1D1Q9NWS0 290 aaKnown RBP15.42■□□□□ 0.06
VRK3-207ENST00000594092 DUS2Q9NX74 493 aaKnown RBP15.42■□□□□ 0.06
VRK3-207ENST00000594092 MARK1Q9P0L2 795 aa15.42■□□□□ 0.06
VRK3-207ENST00000594092 SEPT3Q9UH03 358 aa15.42■□□□□ 0.06
VRK3-207ENST00000594092 C5orf42Q9H799 3197 aa15.41■□□□□ 0.06
VRK3-207ENST00000594092 RGS16O15492 202 aaPredicted RBP15.41■□□□□ 0.06
VRK3-207ENST00000594092 MMP2P08253 660 aa15.41■□□□□ 0.06
VRK3-207ENST00000594092 TYRP14679 529 aa15.41■□□□□ 0.06
VRK3-207ENST00000594092 POU3F3P20264 500 aaPredicted RBP15.41■□□□□ 0.06
VRK3-207ENST00000594092 FCARP24071 287 aa15.41■□□□□ 0.06
VRK3-207ENST00000594092 LTBRP36941 435 aa15.41■□□□□ 0.06
VRK3-207ENST00000594092 GYS2P54840 703 aa15.41■□□□□ 0.06
VRK3-207ENST00000594092 SESN2P58004 480 aaPredicted RBP15.41■□□□□ 0.06
VRK3-207ENST00000594092 GPX6P59796 221 aa15.41■□□□□ 0.06
VRK3-207ENST00000594092 CYTH1Q15438 398 aa15.41■□□□□ 0.06
VRK3-207ENST00000594092 LINGO4Q6UY18 593 aa15.41■□□□□ 0.06
VRK3-207ENST00000594092 EP400NLQ6ZTU2 488 aa15.41■□□□□ 0.06
VRK3-207ENST00000594092 PALM2Q8IXS6 379 aa15.41■□□□□ 0.06
VRK3-207ENST00000594092 BBS5Q8N3I7 341 aa15.41■□□□□ 0.06
VRK3-207ENST00000594092 MPP5Q8N3R9 675 aa15.41■□□□□ 0.06
VRK3-207ENST00000594092 SH2D3CQ8N5H7 860 aa15.41■□□□□ 0.06
VRK3-207ENST00000594092 OR52K1Q8NGK4 314 aa15.41■□□□□ 0.06
VRK3-207ENST00000594092 BPIFB1Q8TDL5 484 aa15.41■□□□□ 0.06
VRK3-207ENST00000594092 ASIC4Q96FT7 647 aa15.41■□□□□ 0.06
VRK3-207ENST00000594092 PSKH2Q96QS6 385 aa15.41■□□□□ 0.06
VRK3-207ENST00000594092 MGME1Q9BQP7 344 aa15.41■□□□□ 0.06
VRK3-207ENST00000594092 CINPQ9BW66 212 aaPredicted RBP15.41■□□□□ 0.06
VRK3-207ENST00000594092 POLR1EQ9GZS1 481 aaKnown RBP15.41■□□□□ 0.06
VRK3-207ENST00000594092 STMN4Q9H169 189 aaPredicted RBP15.41■□□□□ 0.06
VRK3-207ENST00000594092 CASS4Q9NQ75 786 aa15.41■□□□□ 0.06
VRK3-207ENST00000594092 OBP2AQ9NY56 170 aa15.41■□□□□ 0.06
VRK3-207ENST00000594092 INTS6Q9UL03 887 aaKnown RBP15.41■□□□□ 0.06
VRK3-207ENST00000594092 DOCK8Q8NF50 2099 aa15.41■□□□□ 0.06
VRK3-207ENST00000594092 TTC24A2A3L6 582 aaPredicted RBP15.4■□□□□ 0.06
VRK3-207ENST00000594092 HEPACAM2A8MVW5 462 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 TCEA3O75764 348 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 HLA-FP30511 346 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 ADRA1AP35348 466 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 CD86P42081 329 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 SLCO1A2P46721 670 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 PLK1P53350 603 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 MPP3Q13368 585 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 IHHQ14623 411 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 LONRF1Q17RB8 773 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 EML3Q32P44 896 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 PLEKHG6Q3KR16 790 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 TRIM68Q6AZZ1 485 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 ALG1LQ6GMV1 187 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 ASTLQ6HA08 431 aaPredicted RBP15.4■□□□□ 0.06
VRK3-207ENST00000594092 NAPEPLDQ6IQ20 393 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 KDELC1Q6UW63 502 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 CAPN12Q6ZSI9 719 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 ST13P5Q8NFI4 369 aaPredicted RBP15.4■□□□□ 0.06
VRK3-207ENST00000594092 IPMKQ8NFU5 416 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 TADA1Q96BN2 335 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 MRGPRX2Q96LB1 330 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 MYADMQ96S97 322 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 APOL2Q9BQE5 337 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 C2orf49Q9BVC5 232 aaPredicted RBP15.4■□□□□ 0.06
VRK3-207ENST00000594092 ABCB8Q9NUT2 735 aa15.4■□□□□ 0.06
VRK3-207ENST00000594092 ADAM21Q9UKJ8 722 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms