RNA–Protein interactions for RNA: ENST00000593959.1

SYMPK-204, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-204ENST00000593959 FAM72CH0Y354 149 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 TEX33O43247 280 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 ZNF500O60304 480 aaPredicted RBP16.82■□□□□ 0.28
SYMPK-204ENST00000593959 RNGTTO60942 597 aaKnown RBP16.82■□□□□ 0.28
SYMPK-204ENST00000593959 PRNPP04156 253 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 KRT3P12035 628 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 RHOQP17081 205 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 NSFP46459 744 aaKnown RBP16.82■□□□□ 0.28
SYMPK-204ENST00000593959 MAPKAPK2P49137 400 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 SERPINH1P50454 418 aaKnown RBP16.82■□□□□ 0.28
SYMPK-204ENST00000593959 ARF5P84085 180 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 CCDC15Q0P6D6 951 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 ARL13BQ3SXY8 428 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 SLC45A4Q5BKX6 768 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 FIGNQ5HY92 759 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 FAM72AQ5TYM5 149 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 FAM72DQ6L9T8 149 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 LINGO4Q6UY18 593 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 DPY19L3Q6ZPD9 716 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 MON1BQ7L1V2 547 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 FAM72BQ86X60 149 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 SPATS2Q86XZ4 545 aaKnown RBP16.82■□□□□ 0.28
SYMPK-204ENST00000593959 TMEM145Q8NBT3 493 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 CHST14Q8NCH0 376 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 ISG20Q96AZ6 181 aaKnown RBP16.82■□□□□ 0.28
SYMPK-204ENST00000593959 PCMTD1Q96MG8 357 aaPredicted RBP16.82■□□□□ 0.28
SYMPK-204ENST00000593959 EDEM3Q9BZQ6 932 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 GDF3Q9NR23 364 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 TMEM248Q9NWD8 314 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 WASF2Q9Y6W5 498 aa16.82■□□□□ 0.28
SYMPK-204ENST00000593959 CELSR3Q9NYQ7 3312 aa16.81■□□□□ 0.28
SYMPK-204ENST00000593959 CHD5Q8TDI0 1954 aa16.81■□□□□ 0.28
SYMPK-204ENST00000593959 PRAMEF26H0Y7S4 382 aa16.81■□□□□ 0.28
SYMPK-204ENST00000593959 CBX4O00257 560 aa16.81■□□□□ 0.28
SYMPK-204ENST00000593959 CALB1P05937 261 aa16.81■□□□□ 0.28
SYMPK-204ENST00000593959 ETFBP38117 255 aa16.81■□□□□ 0.28
SYMPK-204ENST00000593959 C1QBPQ07021 282 aaKnown RBP16.81■□□□□ 0.28
SYMPK-204ENST00000593959 INAVAQ3KP66 663 aa16.81■□□□□ 0.28
SYMPK-204ENST00000593959 SETMARQ53H47 684 aaPredicted RBP16.81■□□□□ 0.28
SYMPK-204ENST00000593959 PPP1R15BQ5SWA1 713 aa16.81■□□□□ 0.28
SYMPK-204ENST00000593959 PRAMEF14Q5SWL7 426 aa16.81■□□□□ 0.28
SYMPK-204ENST00000593959 SFMBT2Q5VUG0 894 aa16.81■□□□□ 0.28
SYMPK-204ENST00000593959 WDR59Q6PJI9 974 aa16.81■□□□□ 0.28
SYMPK-204ENST00000593959 KANSL1Q7Z3B3 1105 aa16.81■□□□□ 0.28
SYMPK-204ENST00000593959 IRF2BP2Q7Z5L9 587 aa16.81■□□□□ 0.28
SYMPK-204ENST00000593959 OXR1Q8N573 874 aa16.81■□□□□ 0.28
SYMPK-204ENST00000593959 PCDH20Q8N6Y1 951 aaKnown RBP16.81■□□□□ 0.28
SYMPK-204ENST00000593959 ARRDC3Q96B67 414 aa16.81■□□□□ 0.28
SYMPK-204ENST00000593959 AGPAT1Q99943 283 aa16.81■□□□□ 0.28
SYMPK-204ENST00000593959 MAGEB5Q9BZ81 275 aa16.81■□□□□ 0.28
SYMPK-204ENST00000593959 ATP13A1Q9HD20 1204 aa16.81■□□□□ 0.28
SYMPK-204ENST00000593959 NDFIP2Q9NV92 336 aa16.81■□□□□ 0.28
SYMPK-204ENST00000593959 ZNHIT6Q9NWK9 470 aaKnown RBP16.81■□□□□ 0.28
SYMPK-204ENST00000593959 MYO6Q9UM54 1294 aa16.81■□□□□ 0.28
SYMPK-204ENST00000593959 COL5A1P20908 1838 aaPredicted RBP16.81■□□□□ 0.28
SYMPK-204ENST00000593959 LRIG2O94898 1065 aa16.8■□□□□ 0.28
SYMPK-204ENST00000593959 GJB6O95452 261 aa16.8■□□□□ 0.28
SYMPK-204ENST00000593959 PLEKP08567 350 aaPredicted RBP16.8■□□□□ 0.28
SYMPK-204ENST00000593959 EPHA8P29322 1005 aaPredicted RBP16.8■□□□□ 0.28
SYMPK-204ENST00000593959 ARRB1P49407 418 aaPredicted RBP16.8■□□□□ 0.28
SYMPK-204ENST00000593959 SMAD1Q15797 465 aaKnown RBP16.8■□□□□ 0.28
SYMPK-204ENST00000593959 ZNF284Q2VY69 593 aa16.8■□□□□ 0.28
SYMPK-204ENST00000593959 POM121L1PQ3SYA9 428 aa16.8■□□□□ 0.28
SYMPK-204ENST00000593959 TMEM259Q4ZIN3 620 aa16.8■□□□□ 0.28
SYMPK-204ENST00000593959 ARSIQ5FYB1 569 aa16.8■□□□□ 0.28
SYMPK-204ENST00000593959 ERN2Q76MJ5 926 aaKnown RBP16.8■□□□□ 0.28
SYMPK-204ENST00000593959 PHLDB2Q86SQ0 1253 aa16.8■□□□□ 0.28
SYMPK-204ENST00000593959 CCDC185Q8N715 623 aa16.8■□□□□ 0.28
SYMPK-204ENST00000593959 FAM172AQ8WUF8 416 aa16.8■□□□□ 0.28
SYMPK-204ENST00000593959 ARHGEF2Q92974 986 aaKnown RBP16.8■□□□□ 0.28
SYMPK-204ENST00000593959 ZNF830Q96NB3 372 aaPredicted RBP16.8■□□□□ 0.28
SYMPK-204ENST00000593959 SPON2Q9BUD6 331 aa16.8■□□□□ 0.28
SYMPK-204ENST00000593959 MAGEH1Q9H213 219 aa16.8■□□□□ 0.28
SYMPK-204ENST00000593959 TNKS2Q9H2K2 1166 aa16.8■□□□□ 0.28
SYMPK-204ENST00000593959 IL36AQ9UHA7 158 aa16.8■□□□□ 0.28
SYMPK-204ENST00000593959 LUC7L2Q9Y383 392 aaKnown RBP16.8■□□□□ 0.28
SYMPK-204ENST00000593959 APC2O95996 2303 aa16.79■□□□□ 0.28
SYMPK-204ENST00000593959 PLXNB3Q9ULL4 1909 aa16.79■□□□□ 0.28
SYMPK-204ENST00000593959 A0A1W2PQJ5 194 aa16.79■□□□□ 0.28
SYMPK-204ENST00000593959 SRRM3A6NNA2 597 aaPredicted RBP16.79■□□□□ 0.28
SYMPK-204ENST00000593959 TAF4O00268 1085 aa16.79■□□□□ 0.28
SYMPK-204ENST00000593959 KPNA3O00505 521 aaPredicted RBP16.79■□□□□ 0.28
SYMPK-204ENST00000593959 BNIP3LO60238 219 aa16.79■□□□□ 0.28
SYMPK-204ENST00000593959 MAGEC1O60732 1142 aa16.79■□□□□ 0.28
SYMPK-204ENST00000593959 LEFTY1O75610 366 aa16.79■□□□□ 0.28
SYMPK-204ENST00000593959 MAT2AP31153 395 aaKnown RBP16.79■□□□□ 0.28
SYMPK-204ENST00000593959 L1CAMP32004 1257 aa16.79■□□□□ 0.28
SYMPK-204ENST00000593959 ACVRL1P37023 503 aa16.79■□□□□ 0.28
SYMPK-204ENST00000593959 ZNF143P52747 638 aaPredicted RBP16.79■□□□□ 0.28
SYMPK-204ENST00000593959 IL9RQ01113 521 aa16.79■□□□□ 0.28
SYMPK-204ENST00000593959 CDO1Q16878 200 aa16.79■□□□□ 0.28
SYMPK-204ENST00000593959 CARD16Q5EG05 197 aa16.79■□□□□ 0.28
SYMPK-204ENST00000593959 HORMAD1Q86X24 394 aa16.79■□□□□ 0.28
SYMPK-204ENST00000593959 KIAA1524Q8TCG1 905 aa16.79■□□□□ 0.28
SYMPK-204ENST00000593959 ZCCHC14Q8WYQ9 949 aaKnown RBP16.79■□□□□ 0.28
SYMPK-204ENST00000593959 BAP1Q92560 729 aa16.79■□□□□ 0.28
SYMPK-204ENST00000593959 TSC1Q92574 1164 aa16.79■□□□□ 0.28
SYMPK-204ENST00000593959 BAG1Q99933 345 aaPredicted RBP16.79■□□□□ 0.28
SYMPK-204ENST00000593959 HEPHQ9BQS7 1158 aa16.79■□□□□ 0.28
SYMPK-204ENST00000593959 KCNF1Q9H3M0 494 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms