RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 POLR1EQ9GZS1 481 aaKnown RBP21.12■□□□□ 0.97
PNKP-203ENST00000593946 S1PR5Q9H228 398 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 MARK1Q9P0L2 795 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 VPS51Q9UID3 782 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 DSC2Q02487 901 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 ITKQ08881 620 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 MPP3Q13368 585 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 HSP90B2PQ58FF3 399 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 LY6G5CQ5SRR4 150 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 KDELC1Q6UW63 502 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 LINC00523Q86TU6 105 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 APCDD1Q8J025 514 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 MPP5Q8N3R9 675 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 C2orf49Q9BVC5 232 aaPredicted RBP21.12■□□□□ 0.97
PNKP-203ENST00000593946 BBS2Q9BXC9 721 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 VPS37BQ9H9H4 285 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 VPS45Q9NRW7 570 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 HAUS2Q9NVX0 235 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 PIH1D1Q9NWS0 290 aaKnown RBP21.12■□□□□ 0.97
PNKP-203ENST00000593946 MTCH2Q9Y6C9 303 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 A0A087WUV0 522 aaPredicted RBP21.11■□□□□ 0.97
PNKP-203ENST00000593946 SDR42E2A6NKP2 422 aa21.11■□□□□ 0.97
PNKP-203ENST00000593946 NEDD8-MDP1E9PL57 170 aa21.11■□□□□ 0.97
PNKP-203ENST00000593946 SSTR1P30872 391 aa21.11■□□□□ 0.97
PNKP-203ENST00000593946 CD70P32970 193 aa21.11■□□□□ 0.97
PNKP-203ENST00000593946 ADRA1AP35348 466 aa21.11■□□□□ 0.97
PNKP-203ENST00000593946 PLK1P53350 603 aa21.11■□□□□ 0.97
PNKP-203ENST00000593946 SESN2P58004 480 aaPredicted RBP21.11■□□□□ 0.97
PNKP-203ENST00000593946 DLX2Q07687 328 aaPredicted RBP21.11■□□□□ 0.97
PNKP-203ENST00000593946 SLC12A1Q13621 1099 aa21.11■□□□□ 0.97
PNKP-203ENST00000593946 PALM2Q8IXS6 379 aa21.11■□□□□ 0.97
PNKP-203ENST00000593946 KRT222Q8N1A0 295 aa21.11■□□□□ 0.97
PNKP-203ENST00000593946 OSCP1Q8WVF1 389 aa21.11■□□□□ 0.97
PNKP-203ENST00000593946 MRGPRX2Q96LB1 330 aa21.11■□□□□ 0.97
PNKP-203ENST00000593946 EBNA1BP2Q99848 306 aaKnown RBP21.11■□□□□ 0.97
PNKP-203ENST00000593946 CINPQ9BW66 212 aaPredicted RBP21.11■□□□□ 0.97
PNKP-203ENST00000593946 OBP2AQ9NY56 170 aa21.11■□□□□ 0.97
PNKP-203ENST00000593946 OGFRQ9NZT2 677 aa21.11■□□□□ 0.97
PNKP-203ENST00000593946 CDH7Q9ULB5 785 aa21.11■□□□□ 0.97
PNKP-203ENST00000593946 PMPCBO75439 489 aa21.1■□□□□ 0.97
PNKP-203ENST00000593946 CPP00450 1065 aa21.1■□□□□ 0.97
PNKP-203ENST00000593946 TYRP14679 529 aa21.1■□□□□ 0.97
PNKP-203ENST00000593946 POU3F3P20264 500 aaPredicted RBP21.1■□□□□ 0.97
PNKP-203ENST00000593946 FCARP24071 287 aa21.1■□□□□ 0.97
PNKP-203ENST00000593946 HLA-FP30511 346 aa21.1■□□□□ 0.97
PNKP-203ENST00000593946 CD86P42081 329 aa21.1■□□□□ 0.97
PNKP-203ENST00000593946 IHHQ14623 411 aa21.1■□□□□ 0.97
PNKP-203ENST00000593946 GRIN2CQ14957 1233 aa21.1■□□□□ 0.97
PNKP-203ENST00000593946 CYTH1Q15438 398 aa21.1■□□□□ 0.97
PNKP-203ENST00000593946 PLEKHG6Q3KR16 790 aa21.1■□□□□ 0.97
PNKP-203ENST00000593946 INO80DQ53TQ3 878 aaPredicted RBP21.1■□□□□ 0.97
PNKP-203ENST00000593946 ATAT1Q5SQI0 421 aa21.1■□□□□ 0.97
PNKP-203ENST00000593946 CES5AQ6NT32 575 aa21.1■□□□□ 0.97
PNKP-203ENST00000593946 CAPN12Q6ZSI9 719 aa21.1■□□□□ 0.97
PNKP-203ENST00000593946 C3orf62Q6ZUJ4 267 aa21.1■□□□□ 0.97
PNKP-203ENST00000593946 GOLGA6L1Q8N7Z2 621 aa21.1■□□□□ 0.97
PNKP-203ENST00000593946 IPMKQ8NFU5 416 aa21.1■□□□□ 0.97
PNKP-203ENST00000593946 BPIFB1Q8TDL5 484 aa21.1■□□□□ 0.97
PNKP-203ENST00000593946 ACDQ96AP0 544 aa21.1■□□□□ 0.97
PNKP-203ENST00000593946 SEMA3CQ99985 751 aa21.1■□□□□ 0.97
PNKP-203ENST00000593946 TBL1YQ9BQ87 522 aa21.1■□□□□ 0.97
PNKP-203ENST00000593946 DUS2Q9NX74 493 aaKnown RBP21.1■□□□□ 0.97
PNKP-203ENST00000593946 ZC3H7BQ9UGR2 993 aaKnown RBP21.1■□□□□ 0.97
PNKP-203ENST00000593946 INTS6Q9UL03 887 aaKnown RBP21.1■□□□□ 0.97
PNKP-203ENST00000593946 AP3B1O00203 1094 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 SPAG6O75602 509 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 TCEA3O75764 348 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 MGAT1P26572 445 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 PHBP35232 272 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 WNT3AP56704 352 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 CDH17Q12864 832 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 STAT4Q14765 748 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 COL19A1Q14993 1142 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 EML3Q32P44 896 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 KRT71Q3SY84 523 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 LINGO4Q6UY18 593 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 ZNF557Q8N988 423 aaPredicted RBP21.09■□□□□ 0.97
PNKP-203ENST00000593946 DNAAF3Q8N9W5 541 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 PKNOX2Q96KN3 472 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 APOL2Q9BQE5 337 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 ROPN1BQ9BZX4 212 aaPredicted RBP21.09■□□□□ 0.97
PNKP-203ENST00000593946 ROPN1Q9HAT0 212 aaPredicted RBP21.09■□□□□ 0.97
PNKP-203ENST00000593946 PLAC1Q9HBJ0 212 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 TMBIM4Q9HC24 238 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 ABCB8Q9NUT2 735 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 TMCC1O94876 653 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 AGTP01019 485 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 MYZAPP0CAP1 466 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 CRADDP78560 199 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 SKOR1P84550 965 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 RANBP10Q6VN20 620 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 ARL8AQ96BM9 186 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 STAMBPL1Q96FJ0 436 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 ASIC4Q96FT7 647 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 FICDQ9BVA6 458 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 FSD1LQ9BXM9 530 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 SYBUQ9NX95 663 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 CLDND1Q9NY35 253 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 MAD1L1Q9Y6D9 718 aa21.09■□□□□ 0.97
PNKP-203ENST00000593946 XIRP2A4UGR9 3374 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms