RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 A6NNZ2 444 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 TSPAN6O43657 245 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 ALPPL2P10696 532 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 UNGP13051 313 aaPredicted RBP19.22■□□□□ 0.67
CCDC43-205ENST00000592333 ADRB3P13945 408 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 DGKAP23743 735 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 STAT1P42224 750 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 ATP11AP98196 1134 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 FMO1Q01740 532 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 COL28A1Q2UY09 1125 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 CCDC14Q49A88 953 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 C2CD6Q53TS8 623 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 HES3Q5TGS1 186 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 RBM43Q6ZSC3 357 aaKnown RBP19.22■□□□□ 0.67
CCDC43-205ENST00000592333 NLRP14Q86W24 1093 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 SLC25A45Q8N413 288 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 GRIN3AQ8TCU5 1115 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 RXFP2Q8WXD0 754 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 NTAN1Q96AB6 310 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 ARHGEF26Q96DR7 871 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 LENG8Q96PV6 779 aaPredicted RBP19.22■□□□□ 0.67
CCDC43-205ENST00000592333 DUSP23Q9BVJ7 150 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 SLC17A9Q9BYT1 436 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 TNKS2Q9H2K2 1166 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 EVA1BQ9NVM1 165 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 TAB2Q9NYJ8 693 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 ZFR2Q9UPR6 939 aaKnown RBP19.22■□□□□ 0.67
CCDC43-205ENST00000592333 FADS3Q9Y5Q0 445 aa19.22■□□□□ 0.67
CCDC43-205ENST00000592333 ARID1BQ8NFD5 2236 aaPredicted RBP19.22■□□□□ 0.67
CCDC43-205ENST00000592333 URB1O60287 2271 aaKnown RBP19.22■□□□□ 0.67
CCDC43-205ENST00000592333 ZSCAN5CA6NGD5 496 aaPredicted RBP19.21■□□□□ 0.67
CCDC43-205ENST00000592333 GFPT2O94808 682 aa19.21■□□□□ 0.67
CCDC43-205ENST00000592333 CD160O95971 181 aa19.21■□□□□ 0.67
CCDC43-205ENST00000592333 GSRP00390 522 aa19.21■□□□□ 0.67
CCDC43-205ENST00000592333 PRLRP16471 622 aa19.21■□□□□ 0.67
CCDC43-205ENST00000592333 GLDCP23378 1020 aa19.21■□□□□ 0.67
CCDC43-205ENST00000592333 CCNHP51946 323 aaPredicted RBP19.21■□□□□ 0.67
CCDC43-205ENST00000592333 AIF1P55008 147 aa19.21■□□□□ 0.67
CCDC43-205ENST00000592333 POLR2FP61218 127 aaKnown RBP19.21■□□□□ 0.67
CCDC43-205ENST00000592333 TARDBPQ13148 414 aaKnown RBP eCLIP19.21■□□□□ 0.67
CCDC43-205ENST00000592333 POLD3Q15054 466 aaPredicted RBP19.21■□□□□ 0.67
CCDC43-205ENST00000592333 KRT31Q15323 416 aa19.21■□□□□ 0.67
CCDC43-205ENST00000592333 KYAT3Q6YP21 454 aaKnown RBP19.21■□□□□ 0.67
CCDC43-205ENST00000592333 EMC1Q8N766 993 aa19.21■□□□□ 0.67
CCDC43-205ENST00000592333 FAM181AQ8N9Y4 354 aa19.21■□□□□ 0.67
CCDC43-205ENST00000592333 ANKRD20A12PQ8NF67 263 aa19.21■□□□□ 0.67
CCDC43-205ENST00000592333 CASKIN2Q8WXE0 1202 aa19.21■□□□□ 0.67
CCDC43-205ENST00000592333 OSBPL1AQ9BXW6 950 aa19.21■□□□□ 0.67
CCDC43-205ENST00000592333 VPS16Q9H269 839 aa19.21■□□□□ 0.67
CCDC43-205ENST00000592333 NLGN3Q9NZ94 848 aa19.21■□□□□ 0.67
CCDC43-205ENST00000592333 HECAQ9UBI9 543 aaPredicted RBP19.21■□□□□ 0.67
CCDC43-205ENST00000592333 LRRC10BA6NIK2 292 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 SIGLEC6O43699 453 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 PIAS2O75928 621 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 CALB1P05937 261 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 GP1BAP07359 652 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 KRT3P12035 628 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 CHRNB2P17787 502 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 NSFP46459 744 aaKnown RBP19.2■□□□□ 0.66
CCDC43-205ENST00000592333 RABIFP47224 123 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 HNRNPKP61978 463 aaKnown RBP eCLIP19.2■□□□□ 0.66
CCDC43-205ENST00000592333 SNRPD1P62314 119 aaKnown RBP19.2■□□□□ 0.66
CCDC43-205ENST00000592333 C19orf48Q6RUI8 117 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 GCNT7Q6ZNI0 430 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 PHF13Q86YI8 300 aaPredicted RBP19.2■□□□□ 0.66
CCDC43-205ENST00000592333 MARCH9Q86YJ5 346 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 DRC7Q8IY82 874 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 DCBLD1Q8N8Z6 715 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 DENND6BQ8NEG7 585 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 OR13H1Q8NG92 308 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 OR2AP1Q8NGE2 309 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 SLC20A1Q8WUM9 679 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 ARHGEF2Q92974 986 aaKnown RBP19.2■□□□□ 0.66
CCDC43-205ENST00000592333 TBC1D31Q96DN5 1066 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 C1QTNF2Q9BXJ5 285 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 FAM207AQ9NSI2 230 aaPredicted RBP19.2■□□□□ 0.66
CCDC43-205ENST00000592333 NCKIPSDQ9NZQ3 722 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 CLCA2Q9UQC9 943 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 CSNK1G3Q9Y6M4 447 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 CHD5Q8TDI0 1954 aa19.2■□□□□ 0.66
CCDC43-205ENST00000592333 SPTY2D1-AS1A0A0U1RR47 76 aa19.19■□□□□ 0.66
CCDC43-205ENST00000592333 TRIM38O00635 465 aa19.19■□□□□ 0.66
CCDC43-205ENST00000592333 RAMP2O60895 175 aa19.19■□□□□ 0.66
CCDC43-205ENST00000592333 LRIG2O94898 1065 aa19.19■□□□□ 0.66
CCDC43-205ENST00000592333 POP4O95707 220 aaKnown RBP19.19■□□□□ 0.66
CCDC43-205ENST00000592333 CKMT1AP12532 417 aa19.19■□□□□ 0.66
CCDC43-205ENST00000592333 DUSP3P51452 185 aaPredicted RBP19.19■□□□□ 0.66
CCDC43-205ENST00000592333 DNA2P51530 1060 aa19.19■□□□□ 0.66
CCDC43-205ENST00000592333 INO80DQ53TQ3 878 aaPredicted RBP19.19■□□□□ 0.66
CCDC43-205ENST00000592333 ZNF805Q5CZA5 627 aa19.19■□□□□ 0.66
CCDC43-205ENST00000592333 RWDD4Q6NW29 188 aaKnown RBP19.19■□□□□ 0.66
CCDC43-205ENST00000592333 Q6ZSR6 202 aa19.19■□□□□ 0.66
CCDC43-205ENST00000592333 C3orf20Q8ND61 904 aa19.19■□□□□ 0.66
CCDC43-205ENST00000592333 HNRNPLLQ8WVV9 542 aaKnown RBP19.19■□□□□ 0.66
CCDC43-205ENST00000592333 BMFQ96LC9 184 aa19.19■□□□□ 0.66
CCDC43-205ENST00000592333 C11orf70Q9BRQ4 267 aa19.19■□□□□ 0.66
CCDC43-205ENST00000592333 CALN1Q9BXU9 219 aa19.19■□□□□ 0.66
CCDC43-205ENST00000592333 LMBRD1Q9NUN5 540 aa19.19■□□□□ 0.66
CCDC43-205ENST00000592333 ADAM22Q9P0K1 906 aa19.19■□□□□ 0.66
CCDC43-205ENST00000592333 CA5BQ9Y2D0 317 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms