RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 ZCCHC9Q8N567 271 aaKnown RBP10.26□□□□□ -0.77
BRCA1-227ENST00000591849 AADATQ8N5Z0 425 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 LZTR1Q8N653 840 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 TC2NQ8N9U0 490 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 CHST14Q8NCH0 376 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 TMIEQ8NEW7 156 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 NSMCE1Q8WV22 266 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 TEKT4Q8WW24 435 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 ISG20Q96AZ6 181 aaKnown RBP10.26□□□□□ -0.77
BRCA1-227ENST00000591849 SKA1Q96BD8 255 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 TMEM9BQ9NQ34 198 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 CWC15Q9P013 229 aaKnown RBP10.26□□□□□ -0.77
BRCA1-227ENST00000591849 UBA2Q9UBT2 640 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-227ENST00000591849 EVLQ9UI08 416 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-227ENST00000591849 INTUQ9ULD6 942 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 PPM1HQ9ULR3 514 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 ACTL7AQ9Y615 435 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 ABCA7Q8IZY2 2146 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 MAP1BP46821 2468 aaKnown RBP10.25□□□□□ -0.77
BRCA1-227ENST00000591849 CXorf51AA0A1B0GTR3 108 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 MED19A0JLT2 244 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-227ENST00000591849 BCAT2O15382 392 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-227ENST00000591849 SLC7A4O43246 635 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 LEFTY1O75610 366 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 IGSF6O95976 241 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 GSRP00390 522 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 TNNT1P13805 278 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 TCF4P15884 667 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 XPAP23025 273 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-227ENST00000591849 ARHGAP25P42331 645 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 CCNHP51946 323 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-227ENST00000591849 NAP1L1P55209 391 aaKnown RBP10.25□□□□□ -0.77
BRCA1-227ENST00000591849 CNTN1Q12860 1018 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 DPYSL2Q16555 572 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 MYLK3Q32MK0 819 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 SLC45A4Q5BKX6 768 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 ARTNQ5T4W7 220 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 STPG1Q5TH74 334 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 FBXL19Q6PCT2 694 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 SLC23A3Q6PIS1 610 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 POLNQ7Z5Q5 900 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 PRPF39Q86UA1 669 aaKnown RBP10.25□□□□□ -0.77
BRCA1-227ENST00000591849 TMTC1Q8IUR5 882 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 PLPP6Q8IY26 295 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 SPC24Q8NBT2 197 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 OR2AP1Q8NGE2 309 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 OR6K2Q8NGY2 324 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 RFFLQ8WZ73 363 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 DNASE2BQ8WZ79 361 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 GDAP1L1Q96MZ0 367 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 PANX2Q96RD6 677 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 RTKNQ9BST9 563 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 CALN1Q9BXU9 219 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 MAK16Q9BXY0 300 aaKnown RBP10.25□□□□□ -0.77
BRCA1-227ENST00000591849 SLC39A8Q9C0K1 460 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 NOL6Q9H6R4 1146 aaKnown RBP10.25□□□□□ -0.77
BRCA1-227ENST00000591849 PCDH18Q9HCL0 1135 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 OSGEPQ9NPF4 335 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 AASDHPPTQ9NRN7 309 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 SERGEFQ9UGK8 458 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 SARDHQ9UL12 918 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 TPX2Q9ULW0 747 aaKnown RBP10.25□□□□□ -0.77
BRCA1-227ENST00000591849 NENFQ9UMX5 172 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 NEU3Q9UQ49 428 aa10.25□□□□□ -0.77
BRCA1-227ENST00000591849 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-227ENST00000591849 C4orf47A7E2U8 309 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 NEMP1O14524 444 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 ARHGAP33O14559 1287 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 SLC30A4O14863 429 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 SPOPO43791 374 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 PALMO75781 387 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 NEBLO76041 1014 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 TMCC1O94876 653 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 PCDH8O95206 1070 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 ENGP17813 658 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 CD27P26842 260 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 MAT2AP31153 395 aaKnown RBP10.24□□□□□ -0.77
BRCA1-227ENST00000591849 SERPINB6P35237 376 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 CCR5P51681 352 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 NEK3P51956 506 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 METAP1P53582 386 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 ADPRHP54922 357 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 C21orf59P57076 290 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 SLC25A11Q02978 314 aaKnown RBP10.24□□□□□ -0.77
BRCA1-227ENST00000591849 PDK2Q15119 407 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 INO80DQ53TQ3 878 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-227ENST00000591849 CFAP58Q5T655 872 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 ATXN7L2Q5T6C5 722 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-227ENST00000591849 TXNRD3NBQ6F5E7 133 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 ERN2Q76MJ5 926 aaKnown RBP10.24□□□□□ -0.77
BRCA1-227ENST00000591849 BBS5Q8N3I7 341 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 NETO2Q8NC67 525 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 ARRDC3Q96B67 414 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 BIRC7Q96CA5 298 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 LRIG1Q96JA1 1093 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 CSPG4P5Q96PW8 444 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 CINPQ9BW66 212 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-227ENST00000591849 KLC2Q9H0B6 622 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 KDM4CQ9H3R0 1056 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 LRRC19Q9H756 370 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms