RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 ANKMY2Q8IV38 441 aa13.19□□□□□ -0.3
PTBP1-216ENST00000590887 ITFG1Q8TB96 612 aa13.19□□□□□ -0.3
PTBP1-216ENST00000590887 PTCD2Q8WV60 388 aaKnown RBP13.19□□□□□ -0.3
PTBP1-216ENST00000590887 OSCP1Q8WVF1 389 aa13.19□□□□□ -0.3
PTBP1-216ENST00000590887 ING5Q8WYH8 240 aa13.19□□□□□ -0.3
PTBP1-216ENST00000590887 SMG9Q9H0W8 520 aaKnown RBP13.19□□□□□ -0.3
PTBP1-216ENST00000590887 CENPHQ9H3R5 247 aa13.19□□□□□ -0.3
PTBP1-216ENST00000590887 TRPV4Q9HBA0 871 aa13.19□□□□□ -0.3
PTBP1-216ENST00000590887 PDFQ9HBH1 243 aa13.19□□□□□ -0.3
PTBP1-216ENST00000590887 TMBIM4Q9HC24 238 aa13.19□□□□□ -0.3
PTBP1-216ENST00000590887 LRRC4CQ9HCJ2 640 aa13.19□□□□□ -0.3
PTBP1-216ENST00000590887 SCUBE2Q9NQ36 999 aa13.19□□□□□ -0.3
PTBP1-216ENST00000590887 CASS4Q9NQ75 786 aa13.19□□□□□ -0.3
PTBP1-216ENST00000590887 FAM53CQ9NYF3 392 aa13.19□□□□□ -0.3
PTBP1-216ENST00000590887 SLC25A13Q9UJS0 675 aa13.19□□□□□ -0.3
PTBP1-216ENST00000590887 CDH7Q9ULB5 785 aa13.19□□□□□ -0.3
PTBP1-216ENST00000590887 CHMP2BQ9UQN3 213 aa13.19□□□□□ -0.3
PTBP1-216ENST00000590887 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.19□□□□□ -0.3
PTBP1-216ENST00000590887 NOTCH4Q99466 2003 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 TLDC2A0PJX2 215 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 RFXAPO00287 272 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 PEX11BO96011 259 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 PENKP01210 267 aaPredicted RBP13.18□□□□□ -0.3
PTBP1-216ENST00000590887 POU3F3P20264 500 aaPredicted RBP13.18□□□□□ -0.3
PTBP1-216ENST00000590887 HOXD9P28356 352 aaPredicted RBP13.18□□□□□ -0.3
PTBP1-216ENST00000590887 CSKP41240 450 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 MAGEA3P43357 314 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 SGSHP51688 502 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 SESN2P58004 480 aaPredicted RBP13.18□□□□□ -0.3
PTBP1-216ENST00000590887 RAD51Q06609 339 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 ZNF844Q08AG5 666 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 ILF2Q12905 390 aaKnown RBP13.18□□□□□ -0.3
PTBP1-216ENST00000590887 NAB1Q13506 487 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 RASA2Q15283 850 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 KCTD19Q17RG1 926 aaPredicted RBP13.18□□□□□ -0.3
PTBP1-216ENST00000590887 SPANXN3Q5MJ09 141 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 SYCP2LQ5T4T6 812 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 RNF43Q68DV7 783 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 NUDT18Q6ZVK8 323 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 GET4Q7L5D6 327 aaPredicted RBP13.18□□□□□ -0.3
PTBP1-216ENST00000590887 NLRP9Q7RTR0 991 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 OTOP3Q7RTS5 596 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 ADGRG2Q8IZP9 1017 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 DEFB123Q8N688 67 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 PPHLN1Q8NEY8 458 aaKnown RBP13.18□□□□□ -0.3
PTBP1-216ENST00000590887 IPMKQ8NFU5 416 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 GSDMBQ8TAX9 411 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 WFIKKN2Q8TEU8 576 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 FGF13Q92913 245 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 ATP2A3Q93084 1043 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 MYEOVQ96EZ4 313 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 PGM2Q96G03 612 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 SIGLEC10Q96LC7 697 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 PWWP2AQ96N64 755 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 ASB16Q96NS5 453 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 SRPK1Q96SB4 655 aaKnown RBP13.18□□□□□ -0.3
PTBP1-216ENST00000590887 SEMA3CQ99985 751 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 MGME1Q9BQP7 344 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 BCCIPQ9P287 314 aaKnown RBP eCLIP13.18□□□□□ -0.3
PTBP1-216ENST00000590887 CCL26Q9Y258 94 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 NFS1Q9Y697 457 aa13.18□□□□□ -0.3
PTBP1-216ENST00000590887 ATG2AQ2TAZ0 1938 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.17□□□□□ -0.3
PTBP1-216ENST00000590887 NEDD8-MDP1E9PL57 170 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 AGPSO00116 658 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 INSIG1O15503 277 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 PMPCBO75439 489 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 AGTP01019 485 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 TYRP14679 529 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 PAMP19021 973 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 HLA-DPA1P20036 260 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 CD86P42081 329 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 MSH2P43246 934 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 CSNK1DP48730 415 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 WNT3AP56704 352 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 CBX2Q14781 532 aaPredicted RBP13.17□□□□□ -0.3
PTBP1-216ENST00000590887 GRM3Q14832 879 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 PLEKHG6Q3KR16 790 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 PCID2Q5JVF3 399 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 ALG1LQ6GMV1 187 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 MTSS1LQ765P7 747 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 TDRPQ86YL5 185 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 NPAS3Q8IXF0 933 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 AHI1Q8N157 1196 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 NDUFAF2Q8N183 169 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 OR52K1Q8NGK4 314 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 TTC17Q96AE7 1141 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 CFAP36Q96G28 342 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 FEM1CQ96JP0 617 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 ATP6V1G3Q96LB4 118 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 ZSWIM3Q96MP5 696 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 NUDCD1Q96RS6 583 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 GAS2L1Q99501 681 aaPredicted RBP13.17□□□□□ -0.3
PTBP1-216ENST00000590887 MLPHQ9BV36 600 aaPredicted RBP13.17□□□□□ -0.3
PTBP1-216ENST00000590887 FICDQ9BVA6 458 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 ADGRE3Q9BY15 652 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 ACSS3Q9H6R3 686 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 ARNT2Q9HBZ2 717 aa13.17□□□□□ -0.3
PTBP1-216ENST00000590887 MRM3Q9HC36 420 aaKnown RBP13.17□□□□□ -0.3
PTBP1-216ENST00000590887 ABCB8Q9NUT2 735 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms