RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 RNGTTO60942 597 aaKnown RBP12.3□□□□□ -0.44
TPM4-212ENST00000590180 LRCH4O75427 683 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 PCDH8O95206 1070 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 CYP1A2P05177 515 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 HTR7P34969 479 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 PCK1P35558 622 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 CCNHP51946 323 aaPredicted RBP12.3□□□□□ -0.44
TPM4-212ENST00000590180 SNRPD1P62314 119 aaKnown RBP12.3□□□□□ -0.44
TPM4-212ENST00000590180 RACK1P63244 317 aaKnown RBP12.3□□□□□ -0.44
TPM4-212ENST00000590180 BNC1Q01954 994 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 PIGHQ14442 188 aaPredicted RBP12.3□□□□□ -0.44
TPM4-212ENST00000590180 MYLK3Q32MK0 819 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 PARP15Q460N3 678 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 BOLA3Q53S33 107 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 KCNT1Q5JUK3 1230 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 FBXL19Q6PCT2 694 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 LAYNQ6UX15 382 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 ERN2Q76MJ5 926 aaKnown RBP12.3□□□□□ -0.44
TPM4-212ENST00000590180 UMODL1-AS1Q8N2C9 162 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 NETO2Q8NC67 525 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 OR6K2Q8NGY2 324 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 ISG20Q96AZ6 181 aaKnown RBP12.3□□□□□ -0.44
TPM4-212ENST00000590180 PPP1R16AQ96I34 528 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 CELF6Q96J87 481 aaKnown RBP12.3□□□□□ -0.44
TPM4-212ENST00000590180 SERAC1Q96JX3 654 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 SLC6A18Q96N87 628 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 EIF3CQ99613 913 aaKnown RBP12.3□□□□□ -0.44
TPM4-212ENST00000590180 ORAI3Q9BRQ5 295 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 KLC2Q9H0B6 622 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 KDM4CQ9H3R0 1056 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 ZDHHC6Q9H6R6 413 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 EBF2Q9HAK2 575 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 IL21RQ9HBE5 538 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 DNAAF2Q9NVR5 837 aaKnown RBP12.3□□□□□ -0.44
TPM4-212ENST00000590180 ANAPC7Q9UJX3 599 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 TPX2Q9ULW0 747 aaKnown RBP12.3□□□□□ -0.44
TPM4-212ENST00000590180 PCDHB9Q9Y5E1 797 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 SNX11Q9Y5W9 270 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 WASF2Q9Y6W5 498 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 TPRP12270 2363 aaKnown RBP12.29□□□□□ -0.44
TPM4-212ENST00000590180 CXorf51AA0A1B0GTR3 108 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 RNF103O00237 685 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 SH3BP5O60239 455 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 POP4O95707 220 aaKnown RBP12.29□□□□□ -0.44
TPM4-212ENST00000590180 CER1O95813 267 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 ADRB1P08588 477 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 CEACAM1P13688 526 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 CD59P13987 128 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 ERCC2P18074 760 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 CD38P28907 300 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 HNRNPH3P31942 346 aaKnown RBP12.29□□□□□ -0.44
TPM4-212ENST00000590180 GKP32189 559 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 GRIA4P48058 902 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 NDST2P52849 883 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 ADKP55263 362 aaKnown RBP12.29□□□□□ -0.44
TPM4-212ENST00000590180 PPP2CBP62714 309 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 PPP2CAP67775 309 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 RAD51Q06609 339 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 SLC14A1Q13336 389 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 SERINC3Q13530 473 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 SLC45A4Q5BKX6 768 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 PRAMEF14Q5SWL7 426 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 ATXN7L2Q5T6C5 722 aaPredicted RBP12.29□□□□□ -0.44
TPM4-212ENST00000590180 AGBL4Q5VU57 503 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 RFX8Q6ZV50 586 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 PSTKQ8IV42 348 aaKnown RBP12.29□□□□□ -0.44
TPM4-212ENST00000590180 PLPP6Q8IY26 295 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 OR2AP1Q8NGE2 309 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 SETD7Q8WTS6 366 aaKnown RBP12.29□□□□□ -0.44
TPM4-212ENST00000590180 HSPH1Q92598 858 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 KLK6Q92876 244 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 ARHGEF26Q96DR7 871 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 HDAC8Q9BY41 377 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 TRIM5Q9C035 493 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 SLC39A8Q9C0K1 460 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 CWC15Q9P013 229 aaKnown RBP12.29□□□□□ -0.44
TPM4-212ENST00000590180 CTTNBP2NLQ9P2B4 639 aa12.29□□□□□ -0.44
TPM4-212ENST00000590180 A0A1W2PQU0 124 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 ARHGAP42A6NI28 874 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 H3BRJ5 948 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 DFFAO00273 331 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 WNT9AO14904 365 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 VILLO15195 856 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 SLC31A1O15431 190 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 TMCC1O94876 653 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 GSRP00390 522 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 H2AFZP0C0S5 128 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 RARAP10276 462 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 AMPD1P23109 780 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 IL1R2P27930 398 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 ARL4AP40617 200 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 HCAR3P49019 387 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 PAPOLAP51003 745 aaKnown RBP12.28□□□□□ -0.44
TPM4-212ENST00000590180 NEK3P51956 506 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 ZNF135P52742 658 aaPredicted RBP12.28□□□□□ -0.44
TPM4-212ENST00000590180 TAS2R38P59533 333 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 RHOAP61586 193 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 STAT4Q14765 748 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 SUZ12Q15022 739 aaKnown RBP12.28□□□□□ -0.44
TPM4-212ENST00000590180 CYTH1Q15438 398 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms