RNA–Protein interactions for RNA: ENST00000590085.1

HMGN1P31-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 31, humanhuman

BASIC

Gene HMGN1P31, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P31-201ENST00000590085 ZNF217O75362 1048 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 ZRANB2O95218 330 aaKnown RBP eCLIP9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 MAP3K6O95382 1288 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 ADH1BP00325 375 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 CTSLP07711 333 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 BCKDHBP21953 392 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 GARSP41250 739 aaKnown RBP9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 PSMD8P48556 350 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 TPMTP51580 245 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 CCNHP51946 323 aaPredicted RBP9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 METAP1P53582 386 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 COPS2P61201 443 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 ADCY2Q08462 1091 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 CCDC173Q0VFZ6 552 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 CYTH1Q15438 398 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 USP39Q53GS9 565 aaKnown RBP9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 TMCO4Q5TGY1 634 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 DCAF12L1Q5VU92 463 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 DPY19L3Q6ZPD9 716 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 DSG4Q86SJ6 1040 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 LRRC49Q8IUZ0 686 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 MMAAQ8IVH4 418 aaKnown RBP9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 RCOR2Q8IZ40 523 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 PGBD3Q8N328 593 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 AADATQ8N5Z0 425 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 FAM160A2Q8N612 972 aaPredicted RBP9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 FRMD1Q8N878 549 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 CHST14Q8NCH0 376 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 OR2AP1Q8NGE2 309 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 RLN3Q8WXF3 142 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 OR8D1Q8WZ84 308 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 FATE1Q969F0 183 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 FAM131CQ96AQ9 280 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 HDAC11Q96DB2 347 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 SPACA7Q96KW9 195 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 CCDC114Q96M63 670 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 ZNF599Q96NL3 588 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 OLFM3Q96PB7 478 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 TSGA13Q96PP4 275 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 PHOX2BQ99453 314 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 HERPUD2Q9BSE4 406 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 TM6SF2Q9BZW4 377 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 PABPC3Q9H361 631 aaKnown RBP9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 ITM2CQ9NQX7 267 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 UBA2Q9UBT2 640 aaPredicted RBP9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 SERGEFQ9UGK8 458 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 MBD1Q9UIS9 605 aaPredicted RBP9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 AMFRQ9UKV5 643 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 SARDHQ9UL12 918 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 PPM1HQ9ULR3 514 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 PACSIN2Q9UNF0 486 aaPredicted RBP9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 CYP8B1Q9UNU6 501 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 SMG5Q9UPR3 1016 aaKnown RBP9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 WASF2Q9Y6W5 498 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 KNL1Q8NG31 2342 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 LRP4O75096 1905 aa9.5□□□□□ -0.89
HMGN1P31-201ENST00000590085 RNF103O00237 685 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 RNASEH1O60930 286 aaKnown RBP9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 IL1BP01584 269 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 DNTTP04053 509 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 KRT10P13645 584 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 PECAM1P16284 738 aaPredicted RBP9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 ZFXP17010 805 aaPredicted RBP9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 C5AR1P21730 350 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 CHRNA3P32297 505 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 DRD3P35462 400 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 RGRP47804 291 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 RWDD2BP57060 319 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 RHOAP61586 193 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 DYNLT1P63172 113 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 BYSLQ13895 437 aaKnown RBP9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 TFDP2Q14188 446 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 RFTN1Q14699 578 aaPredicted RBP9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 LBRQ14739 615 aaKnown RBP9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 TTC31Q49AM3 519 aaPredicted RBP9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 ODF2Q5BJF6 829 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 CARD16Q5EG05 197 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 ATXN7L2Q5T6C5 722 aaPredicted RBP9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 NPNTQ6UXI9 565 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 BBS12Q6ZW61 710 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 USP30Q70CQ3 517 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 KBTBD6Q86V97 674 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 C11orf74Q86VG3 221 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 RFX6Q8HWS3 928 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 CCDC50Q8IVM0 306 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 REXO1L1PQ8IX06 675 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 SUMF1Q8NBK3 374 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 TMIEQ8NEW7 156 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 PIP4K2CQ8TBX8 421 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 GRIN3AQ8TCU5 1115 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 MAML1Q92585 1016 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 ZC3H10Q96K80 434 aaKnown RBP9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 GDAP1L1Q96MZ0 367 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 PSKH2Q96QS6 385 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 DUSP15Q9H1R2 295 aaPredicted RBP9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 SEMA4AQ9H3S1 761 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 IL36AQ9UHA7 158 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 FZD4Q9ULV1 537 aa9.49□□□□□ -0.89
HMGN1P31-201ENST00000590085 SCML1Q9UN30 329 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms