RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 TTC28Q96AY4 2481 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 TECTAO75443 2155 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 KCNN4O15554 427 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 ZBTB24O43167 697 aaPredicted RBP13.84□□□□□ -0.19
VMP1-210ENST00000589823 PI15O43692 258 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 ADAM23O75077 832 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 SIN3BO75182 1162 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 IGSF6O95976 241 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 GSRP00390 522 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 ITKQ08881 620 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 GAS6Q14393 721 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 CARD16Q5EG05 197 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 DNTTIP2Q5QJE6 756 aaKnown RBP13.84□□□□□ -0.19
VMP1-210ENST00000589823 DRICH1Q6PGQ1 229 aaPredicted RBP13.84□□□□□ -0.19
VMP1-210ENST00000589823 PLPP6Q8IY26 295 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 RYBPQ8N488 228 aaPredicted RBP13.84□□□□□ -0.19
VMP1-210ENST00000589823 FBXL6Q8N531 539 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 PRELID2Q8N945 189 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 TSEN2Q8NCE0 465 aaKnown RBP13.84□□□□□ -0.19
VMP1-210ENST00000589823 OR2AP1Q8NGE2 309 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 PTPRN2Q92932 1015 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 NKD2Q969F2 451 aaPredicted RBP13.84□□□□□ -0.19
VMP1-210ENST00000589823 MAGOHBQ96A72 148 aaKnown RBP13.84□□□□□ -0.19
VMP1-210ENST00000589823 GDAP1L1Q96MZ0 367 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 PSKH2Q96QS6 385 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 VAT1Q99536 393 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 IL12RB2Q99665 862 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 C10orf88Q9H8K7 445 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 FBRSQ9HAH7 460 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 POLMQ9NP87 494 aaPredicted RBP13.84□□□□□ -0.19
VMP1-210ENST00000589823 NT5MQ9NPB1 228 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 LHX3Q9UBR4 397 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 CDC23Q9UJX2 597 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 TTLL3Q9Y4R7 772 aa13.84□□□□□ -0.19
VMP1-210ENST00000589823 MUC22E2RYF6 1773 aaPredicted RBP13.83□□□□□ -0.19
VMP1-210ENST00000589823 A0A0C4DFX4 3053 aa13.83□□□□□ -0.2
VMP1-210ENST00000589823 RNF103O00237 685 aa13.83□□□□□ -0.2
VMP1-210ENST00000589823 RNASEH1O60930 286 aaKnown RBP13.83□□□□□ -0.2
VMP1-210ENST00000589823 STIP1P31948 543 aaKnown RBP13.83□□□□□ -0.2
VMP1-210ENST00000589823 DGKEP52429 567 aa13.83□□□□□ -0.2
VMP1-210ENST00000589823 LMNB2Q03252 620 aa13.83□□□□□ -0.2
VMP1-210ENST00000589823 RAD51Q06609 339 aa13.83□□□□□ -0.2
VMP1-210ENST00000589823 CKAP4Q07065 602 aaKnown RBP13.83□□□□□ -0.2
VMP1-210ENST00000589823 NSUN2Q08J23 767 aaKnown RBP eCLIP13.83□□□□□ -0.2
VMP1-210ENST00000589823 ZBTB17Q13105 803 aa13.83□□□□□ -0.2
VMP1-210ENST00000589823 CAMK2GQ13555 558 aaPredicted RBP13.83□□□□□ -0.2
VMP1-210ENST00000589823 ELAVL3Q14576 367 aaKnown RBP13.83□□□□□ -0.2
VMP1-210ENST00000589823 OASLQ15646 514 aaKnown RBP13.83□□□□□ -0.2
VMP1-210ENST00000589823 CRY1Q16526 586 aa13.83□□□□□ -0.2
VMP1-210ENST00000589823 TEX44Q53QW1 395 aa13.83□□□□□ -0.2
VMP1-210ENST00000589823 C9orf64Q5T6V5 341 aa13.83□□□□□ -0.2
VMP1-210ENST00000589823 DSG4Q86SJ6 1040 aa13.83□□□□□ -0.2
VMP1-210ENST00000589823 OR8D1Q8WZ84 308 aa13.83□□□□□ -0.2
VMP1-210ENST00000589823 EXOC2Q96KP1 924 aa13.83□□□□□ -0.2
VMP1-210ENST00000589823 AGAP3Q96P47 875 aa13.83□□□□□ -0.2
VMP1-210ENST00000589823 TMEM121Q9BTD3 319 aa13.83□□□□□ -0.2
VMP1-210ENST00000589823 POLR1EQ9GZS1 481 aaKnown RBP13.83□□□□□ -0.2
VMP1-210ENST00000589823 MTG2Q9H4K7 406 aa13.83□□□□□ -0.2
VMP1-210ENST00000589823 PRSS16Q9NQE7 514 aa13.83□□□□□ -0.2
VMP1-210ENST00000589823 DLGAP2Q9P1A6 1054 aa13.83□□□□□ -0.2
VMP1-210ENST00000589823 KLHL8Q9P2G9 620 aaPredicted RBP13.83□□□□□ -0.2
VMP1-210ENST00000589823 HECAQ9UBI9 543 aaPredicted RBP13.83□□□□□ -0.2
VMP1-210ENST00000589823 TRHDEQ9UKU6 1024 aa13.83□□□□□ -0.2
VMP1-210ENST00000589823 DRG1Q9Y295 367 aaKnown RBP13.83□□□□□ -0.2
VMP1-210ENST00000589823 TRIOO75962 3097 aa13.83□□□□□ -0.2
VMP1-210ENST00000589823 MUC3AQ02505 3323 aa13.83□□□□□ -0.2
VMP1-210ENST00000589823 A0A1W2PQF6 199 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 FAM86C2PA6NEL3 165 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 ALOX15BO15296 676 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 PHF2O75151 1096 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 ZNF821O75541 412 aaPredicted RBP13.82□□□□□ -0.2
VMP1-210ENST00000589823 ALDH1A2O94788 518 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 HLA-DQB2P05538 268 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 ITGAVP06756 1048 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 COL9A1P20849 921 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 PTPN3P26045 913 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 MAPK8P45983 427 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 CXCL12P48061 93 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 CSNK1DP48730 415 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 SCNN1BP51168 640 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 CCR3P51677 355 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 CCNHP51946 323 aaPredicted RBP13.82□□□□□ -0.2
VMP1-210ENST00000589823 WASHC5Q12768 1159 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 MTAPQ13126 283 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 CYP1B1Q16678 543 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 WHAMMP3Q1A5X7 153 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 ATXN7L2Q5T6C5 722 aaPredicted RBP13.82□□□□□ -0.2
VMP1-210ENST00000589823 KIAA1211LQ6NV74 962 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 DPY19L3Q6ZPD9 716 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 GSTA5Q7RTV2 222 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 PID1Q7Z2X4 250 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 STK40Q8N2I9 435 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 FAM71DQ8N9W8 422 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 C12orf50Q8NA57 414 aaPredicted RBP13.82□□□□□ -0.2
VMP1-210ENST00000589823 OR2A12Q8NGT7 310 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 OR2T3Q8NH03 318 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 ATL2Q8NHH9 583 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 ERLEC1Q96DZ1 483 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 MGME1Q9BQP7 344 aa13.82□□□□□ -0.2
VMP1-210ENST00000589823 HEPHQ9BQS7 1158 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms