RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 CCDC13Q8IYE1 715 aa22.82■■□□□ 1.24
R3HDM4-205ENST00000589445 BBS5Q8N3I7 341 aa22.82■■□□□ 1.24
R3HDM4-205ENST00000589445 CAMKK1Q8N5S9 505 aa22.82■■□□□ 1.24
R3HDM4-205ENST00000589445 ZDHHC6Q9H6R6 413 aa22.82■■□□□ 1.24
R3HDM4-205ENST00000589445 CD248Q9HCU0 757 aa22.82■■□□□ 1.24
R3HDM4-205ENST00000589445 LHX3Q9UBR4 397 aa22.82■■□□□ 1.24
R3HDM4-205ENST00000589445 SEPT3Q9UH03 358 aa22.82■■□□□ 1.24
R3HDM4-205ENST00000589445 EFR3BQ9Y2G0 817 aa22.82■■□□□ 1.24
R3HDM4-205ENST00000589445 NR2C2P49116 596 aa22.81■■□□□ 1.24
R3HDM4-205ENST00000589445 CCNHP51946 323 aaPredicted RBP22.81■■□□□ 1.24
R3HDM4-205ENST00000589445 SNRPD1P62314 119 aaKnown RBP22.81■■□□□ 1.24
R3HDM4-205ENST00000589445 OTUD4Q01804 1114 aaKnown RBP22.81■■□□□ 1.24
R3HDM4-205ENST00000589445 PPIDQ08752 370 aaKnown RBP22.81■■□□□ 1.24
R3HDM4-205ENST00000589445 SLC10A7Q0GE19 358 aa22.81■■□□□ 1.24
R3HDM4-205ENST00000589445 RFTN1Q14699 578 aaPredicted RBP22.81■■□□□ 1.24
R3HDM4-205ENST00000589445 CYTH1Q15438 398 aa22.81■■□□□ 1.24
R3HDM4-205ENST00000589445 POM121L1PQ3SYA9 428 aa22.81■■□□□ 1.24
R3HDM4-205ENST00000589445 BZW1Q7L1Q6 419 aaKnown RBP22.81■■□□□ 1.24
R3HDM4-205ENST00000589445 TMPRSS6Q8IU80 811 aa22.81■■□□□ 1.24
R3HDM4-205ENST00000589445 MMAAQ8IVH4 418 aaKnown RBP22.81■■□□□ 1.24
R3HDM4-205ENST00000589445 CHST14Q8NCH0 376 aa22.81■■□□□ 1.24
R3HDM4-205ENST00000589445 OR2AP1Q8NGE2 309 aa22.81■■□□□ 1.24
R3HDM4-205ENST00000589445 OR2A12Q8NGT7 310 aa22.81■■□□□ 1.24
R3HDM4-205ENST00000589445 PRCCQ92733 491 aaPredicted RBP22.81■■□□□ 1.24
R3HDM4-205ENST00000589445 MRGPRX1Q96LB2 322 aa22.81■■□□□ 1.24
R3HDM4-205ENST00000589445 ZNF599Q96NL3 588 aa22.81■■□□□ 1.24
R3HDM4-205ENST00000589445 RSPH9Q9H1X1 276 aaPredicted RBP22.81■■□□□ 1.24
R3HDM4-205ENST00000589445 PLXND1Q9Y4D7 1925 aa22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 H7C0C1 242 aa22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 KRIT1O00522 736 aa22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 MCF2LO15068 1137 aa22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 AXIN1O15169 862 aa22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 CEP104O60308 925 aa22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 GSRP00390 522 aa22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 IL1BP01584 269 aa22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 DNTTP04053 509 aa22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 SP9P0CG40 484 aa22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 ACADMP11310 421 aa22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 TDGF1P13385 188 aa22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 MMP13P45452 471 aa22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 ATP5OP48047 213 aa22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 NOMO1Q15155 1222 aa22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 CARD16Q5EG05 197 aa22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 DPY19L3Q6ZPD9 716 aa22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 TSEN2Q8NCE0 465 aaKnown RBP22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 ACTL9Q8TC94 416 aa22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 ISG20Q96AZ6 181 aaKnown RBP22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 SIPA1Q96FS4 1042 aa22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 QKIQ96PU8 341 aaKnown RBP eCLIP22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 WDR24Q96S15 920 aa22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 HECAQ9UBI9 543 aaPredicted RBP22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 IL36AQ9UHA7 158 aa22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 ZKSCAN5Q9Y2L8 839 aa22.8■■□□□ 1.24
R3HDM4-205ENST00000589445 TCRBV7S2A1N4TA0A589 114 aa22.79■■□□□ 1.24
R3HDM4-205ENST00000589445 C1QTNF3-AMACRE9PGA6 284 aa22.79■■□□□ 1.24
R3HDM4-205ENST00000589445 KCNK1O00180 336 aa22.79■■□□□ 1.24
R3HDM4-205ENST00000589445 ZNF821O75541 412 aaPredicted RBP22.79■■□□□ 1.24
R3HDM4-205ENST00000589445 PEX11BO96011 259 aa22.79■■□□□ 1.24
R3HDM4-205ENST00000589445 CCNCP24863 283 aa22.79■■□□□ 1.24
R3HDM4-205ENST00000589445 EIF3EP60228 445 aaKnown RBP22.79■■□□□ 1.24
R3HDM4-205ENST00000589445 RPS14P62263 151 aaKnown RBP22.79■■□□□ 1.24
R3HDM4-205ENST00000589445 CST6Q15828 149 aa22.79■■□□□ 1.24
R3HDM4-205ENST00000589445 TTC31Q49AM3 519 aaPredicted RBP22.79■■□□□ 1.24
R3HDM4-205ENST00000589445 HS1BP3Q53T59 392 aa22.79■■□□□ 1.24
R3HDM4-205ENST00000589445 MARC1Q5VT66 337 aa22.79■■□□□ 1.24
R3HDM4-205ENST00000589445 RASSF3Q86WH2 238 aa22.79■■□□□ 1.24
R3HDM4-205ENST00000589445 SLC13A5Q86YT5 568 aaPredicted RBP22.79■■□□□ 1.24
R3HDM4-205ENST00000589445 GANCQ8TET4 914 aa22.79■■□□□ 1.24
R3HDM4-205ENST00000589445 TFB1MQ8WVM0 346 aaKnown RBP22.79■■□□□ 1.24
R3HDM4-205ENST00000589445 TSGA13Q96PP4 275 aa22.79■■□□□ 1.24
R3HDM4-205ENST00000589445 CEP41Q9BYV8 373 aa22.79■■□□□ 1.24
R3HDM4-205ENST00000589445 NT5MQ9NPB1 228 aa22.79■■□□□ 1.24
R3HDM4-205ENST00000589445 KCND1Q9NSA2 647 aa22.79■■□□□ 1.24
R3HDM4-205ENST00000589445 FAM86C1Q9NVL1 165 aa22.79■■□□□ 1.24
R3HDM4-205ENST00000589445 EVLQ9UI08 416 aaPredicted RBP22.79■■□□□ 1.24
R3HDM4-205ENST00000589445 H0Y858 1186 aa22.78■■□□□ 1.24
R3HDM4-205ENST00000589445 KPNA3O00505 521 aaPredicted RBP22.78■■□□□ 1.24
R3HDM4-205ENST00000589445 ALOX15BO15296 676 aa22.78■■□□□ 1.24
R3HDM4-205ENST00000589445 GKP32189 559 aa22.78■■□□□ 1.24
R3HDM4-205ENST00000589445 CHRNA3P32297 505 aa22.78■■□□□ 1.24
R3HDM4-205ENST00000589445 RGRP47804 291 aa22.78■■□□□ 1.24
R3HDM4-205ENST00000589445 NRLP54845 237 aa22.78■■□□□ 1.24
R3HDM4-205ENST00000589445 PRKD1Q15139 912 aaPredicted RBP22.78■■□□□ 1.24
R3HDM4-205ENST00000589445 CDKL3Q8IVW4 592 aaPredicted RBP22.78■■□□□ 1.24
R3HDM4-205ENST00000589445 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.78■■□□□ 1.24
R3HDM4-205ENST00000589445 NAPGQ99747 312 aaPredicted RBP22.78■■□□□ 1.24
R3HDM4-205ENST00000589445 IRF2BPLQ9H1B7 796 aa22.78■■□□□ 1.24
R3HDM4-205ENST00000589445 CD93Q9NPY3 652 aa22.78■■□□□ 1.24
R3HDM4-205ENST00000589445 HAUS2Q9NVX0 235 aa22.78■■□□□ 1.24
R3HDM4-205ENST00000589445 MUSKO15146 869 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 MATN3O15232 486 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 MID1O15344 667 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 ADH1BP00325 375 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 FGGP02679 453 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 PRNPP04156 253 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 CCNB1P14635 433 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 RENBPP51606 427 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 MAXP61244 160 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 ITKQ08881 620 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 KLF1Q13351 362 aaPredicted RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms