RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 CCNB1P14635 433 aa19.9■□□□□ 0.78
CIRBP-220ENST00000588917 TCP1P17987 556 aaKnown RBP19.9■□□□□ 0.78
CIRBP-220ENST00000588917 RHOAP61586 193 aa19.9■□□□□ 0.78
CIRBP-220ENST00000588917 ETF1P62495 437 aaKnown RBP19.9■□□□□ 0.78
CIRBP-220ENST00000588917 ZBTB16Q05516 673 aa19.9■□□□□ 0.78
CIRBP-220ENST00000588917 AP1B1Q10567 949 aa19.9■□□□□ 0.78
CIRBP-220ENST00000588917 KLF1Q13351 362 aaPredicted RBP19.9■□□□□ 0.78
CIRBP-220ENST00000588917 CYTH1Q15438 398 aa19.9■□□□□ 0.78
CIRBP-220ENST00000588917 ZNF528Q3MIS6 628 aa19.9■□□□□ 0.78
CIRBP-220ENST00000588917 LEKR1Q6ZMV7 388 aa19.9■□□□□ 0.78
CIRBP-220ENST00000588917 ZNF366Q8N895 744 aa19.9■□□□□ 0.78
CIRBP-220ENST00000588917 OR2AP1Q8NGE2 309 aa19.9■□□□□ 0.78
CIRBP-220ENST00000588917 LRIG1Q96JA1 1093 aa19.9■□□□□ 0.78
CIRBP-220ENST00000588917 PSKH2Q96QS6 385 aa19.9■□□□□ 0.78
CIRBP-220ENST00000588917 NAPGQ99747 312 aaPredicted RBP19.9■□□□□ 0.78
CIRBP-220ENST00000588917 CINPQ9BW66 212 aaPredicted RBP19.9■□□□□ 0.78
CIRBP-220ENST00000588917 PRMT8Q9NR22 394 aaPredicted RBP19.9■□□□□ 0.78
CIRBP-220ENST00000588917 SAE1Q9UBE0 346 aaPredicted RBP19.9■□□□□ 0.78
CIRBP-220ENST00000588917 SNX12Q9UMY4 172 aa19.9■□□□□ 0.78
CIRBP-220ENST00000588917 SCML1Q9UN30 329 aa19.9■□□□□ 0.78
CIRBP-220ENST00000588917 FCF1Q9Y324 198 aaKnown RBP19.9■□□□□ 0.78
CIRBP-220ENST00000588917 TCRBV21S2A2A0A5A6 115 aa19.89■□□□□ 0.77
CIRBP-220ENST00000588917 MAP3K6O95382 1288 aa19.89■□□□□ 0.77
CIRBP-220ENST00000588917 POP4O95707 220 aaKnown RBP19.89■□□□□ 0.77
CIRBP-220ENST00000588917 IGSF6O95976 241 aa19.89■□□□□ 0.77
CIRBP-220ENST00000588917 CES1P23141 567 aa19.89■□□□□ 0.77
CIRBP-220ENST00000588917 CXCR5P32302 372 aa19.89■□□□□ 0.77
CIRBP-220ENST00000588917 CSNK1DP48730 415 aa19.89■□□□□ 0.77
CIRBP-220ENST00000588917 OTUD4Q01804 1114 aaKnown RBP19.89■□□□□ 0.77
CIRBP-220ENST00000588917 CSTF1Q05048 431 aaKnown RBP19.89■□□□□ 0.77
CIRBP-220ENST00000588917 BYSLQ13895 437 aaKnown RBP19.89■□□□□ 0.77
CIRBP-220ENST00000588917 ZNF235Q14590 738 aa19.89■□□□□ 0.77
CIRBP-220ENST00000588917 GRM3Q14832 879 aa19.89■□□□□ 0.77
CIRBP-220ENST00000588917 NOMO1Q15155 1222 aa19.89■□□□□ 0.77
CIRBP-220ENST00000588917 FAM46CQ5VWP2 391 aa19.89■□□□□ 0.77
CIRBP-220ENST00000588917 KIAA1211LQ6NV74 962 aa19.89■□□□□ 0.77
CIRBP-220ENST00000588917 Q6ZVU0 165 aa19.89■□□□□ 0.77
CIRBP-220ENST00000588917 TMPRSS6Q8IU80 811 aa19.89■□□□□ 0.77
CIRBP-220ENST00000588917 PGBD3Q8N328 593 aa19.89■□□□□ 0.77
CIRBP-220ENST00000588917 TEX26Q8N6G2 289 aa19.89■□□□□ 0.77
CIRBP-220ENST00000588917 OR2A12Q8NGT7 310 aa19.89■□□□□ 0.77
CIRBP-220ENST00000588917 ACTL9Q8TC94 416 aa19.89■□□□□ 0.77
CIRBP-220ENST00000588917 MAML1Q92585 1016 aa19.89■□□□□ 0.77
CIRBP-220ENST00000588917 PRCCQ92733 491 aaPredicted RBP19.89■□□□□ 0.77
CIRBP-220ENST00000588917 GDAP1L1Q96MZ0 367 aa19.89■□□□□ 0.77
CIRBP-220ENST00000588917 LGMNQ99538 433 aa19.89■□□□□ 0.77
CIRBP-220ENST00000588917 RSPH9Q9H1X1 276 aaPredicted RBP19.89■□□□□ 0.77
CIRBP-220ENST00000588917 CD248Q9HCU0 757 aa19.89■□□□□ 0.77
CIRBP-220ENST00000588917 HOMER3Q9NSC5 361 aa19.89■□□□□ 0.77
CIRBP-220ENST00000588917 BCCIPQ9P287 314 aaKnown RBP eCLIP19.89■□□□□ 0.77
CIRBP-220ENST00000588917 HECAQ9UBI9 543 aaPredicted RBP19.89■□□□□ 0.77
CIRBP-220ENST00000588917 TTC7AQ9ULT0 858 aaPredicted RBP19.89■□□□□ 0.77
CIRBP-220ENST00000588917 H7C0C1 242 aa19.88■□□□□ 0.77
CIRBP-220ENST00000588917 K7ESF4 209 aa19.88■□□□□ 0.77
CIRBP-220ENST00000588917 BNIP3LO60238 219 aa19.88■□□□□ 0.77
CIRBP-220ENST00000588917 ZNF821O75541 412 aaPredicted RBP19.88■□□□□ 0.77
CIRBP-220ENST00000588917 PEX11BO96011 259 aa19.88■□□□□ 0.77
CIRBP-220ENST00000588917 PRNPP04156 253 aa19.88■□□□□ 0.77
CIRBP-220ENST00000588917 C7P10643 843 aa19.88■□□□□ 0.77
CIRBP-220ENST00000588917 ACADMP11310 421 aa19.88■□□□□ 0.77
CIRBP-220ENST00000588917 PECAM1P16284 738 aaPredicted RBP19.88■□□□□ 0.77
CIRBP-220ENST00000588917 MMP13P45452 471 aa19.88■□□□□ 0.77
CIRBP-220ENST00000588917 MAPK8P45983 427 aa19.88■□□□□ 0.77
CIRBP-220ENST00000588917 ATP5OP48047 213 aa19.88■□□□□ 0.77
CIRBP-220ENST00000588917 EIF3EP60228 445 aaKnown RBP19.88■□□□□ 0.77
CIRBP-220ENST00000588917 SLC10A7Q0GE19 358 aa19.88■□□□□ 0.77
CIRBP-220ENST00000588917 RALGPS1Q5JS13 557 aa19.88■□□□□ 0.77
CIRBP-220ENST00000588917 PAPD7Q5XG87 772 aaKnown RBP19.88■□□□□ 0.77
CIRBP-220ENST00000588917 ZC3H18Q86VM9 953 aaKnown RBP19.88■□□□□ 0.77
CIRBP-220ENST00000588917 TMIEQ8NEW7 156 aa19.88■□□□□ 0.77
CIRBP-220ENST00000588917 SIPA1Q96FS4 1042 aa19.88■□□□□ 0.77
CIRBP-220ENST00000588917 OSBPL9Q96SU4 736 aa19.88■□□□□ 0.77
CIRBP-220ENST00000588917 FAM129BQ96TA1 746 aa19.88■□□□□ 0.77
CIRBP-220ENST00000588917 VAT1Q99536 393 aa19.88■□□□□ 0.77
CIRBP-220ENST00000588917 HEPHQ9BQS7 1158 aa19.88■□□□□ 0.77
CIRBP-220ENST00000588917 TNKS2Q9H2K2 1166 aa19.88■□□□□ 0.77
CIRBP-220ENST00000588917 C2orf42Q9NWW7 574 aa19.88■□□□□ 0.77
CIRBP-220ENST00000588917 ACTL7AQ9Y615 435 aa19.88■□□□□ 0.77
CIRBP-220ENST00000588917 CHD5Q8TDI0 1954 aa19.88■□□□□ 0.77
CIRBP-220ENST00000588917 C1QTNF3-AMACRE9PGA6 284 aa19.87■□□□□ 0.77
CIRBP-220ENST00000588917 LMNAP02545 664 aaKnown RBP19.87■□□□□ 0.77
CIRBP-220ENST00000588917 FGGP02679 453 aa19.87■□□□□ 0.77
CIRBP-220ENST00000588917 DNTTP04053 509 aa19.87■□□□□ 0.77
CIRBP-220ENST00000588917 CASQ1P31415 396 aa19.87■□□□□ 0.77
CIRBP-220ENST00000588917 CHRNA3P32297 505 aa19.87■□□□□ 0.77
CIRBP-220ENST00000588917 COPAP53621 1224 aa19.87■□□□□ 0.77
CIRBP-220ENST00000588917 IFI35P80217 286 aaPredicted RBP19.87■□□□□ 0.77
CIRBP-220ENST00000588917 CCDC15Q0P6D6 951 aa19.87■□□□□ 0.77
CIRBP-220ENST00000588917 PRKD1Q15139 912 aaPredicted RBP19.87■□□□□ 0.77
CIRBP-220ENST00000588917 LONRF2Q1L5Z9 754 aa19.87■□□□□ 0.77
CIRBP-220ENST00000588917 MYLK3Q32MK0 819 aa19.87■□□□□ 0.77
CIRBP-220ENST00000588917 SLC45A4Q5BKX6 768 aa19.87■□□□□ 0.77
CIRBP-220ENST00000588917 ZNF776Q68DI1 518 aaPredicted RBP19.87■□□□□ 0.77
CIRBP-220ENST00000588917 RASSF3Q86WH2 238 aa19.87■□□□□ 0.77
CIRBP-220ENST00000588917 CDKL3Q8IVW4 592 aaPredicted RBP19.87■□□□□ 0.77
CIRBP-220ENST00000588917 STK40Q8N2I9 435 aa19.87■□□□□ 0.77
CIRBP-220ENST00000588917 C17orf53Q8N3J3 647 aaPredicted RBP19.87■□□□□ 0.77
CIRBP-220ENST00000588917 RASGEF1CQ8N431 466 aa19.87■□□□□ 0.77
CIRBP-220ENST00000588917 RYBPQ8N488 228 aaPredicted RBP19.87■□□□□ 0.77
CIRBP-220ENST00000588917 TSEN2Q8NCE0 465 aaKnown RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms