RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 RPL10LQ96L21 214 aaKnown RBP17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 NECAB3Q96P71 396 aaPredicted RBP17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 TMEM245Q9H330 911 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 GOLGA6AQ9NYA3 693 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 NDRG2Q9UN36 371 aaKnown RBP17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 ATP8A1Q9Y2Q0 1164 aa17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 MUC22E2RYF6 1773 aaPredicted RBP17.24■□□□□ 0.35
SCAMP4-211ENST00000588907 FAM187AA6NFU0 413 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 MT-CO1P00395 513 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 NTSR1P30989 418 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 STK19P49842 368 aaPredicted RBP17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 AP1S1P61966 158 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 RAD51Q06609 339 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 C2orf54Q08AI8 447 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 ZBTB17Q13105 803 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 STARD3Q14849 445 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 UBXN2BQ14CS0 331 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 CYTH1Q15438 398 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 DLG2Q15700 870 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 GLE1Q53GS7 698 aaKnown RBP17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 EOGTQ5NDL2 527 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 ANKRD20A2Q5SQ80 823 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 IER5LQ5T953 404 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 ANKRD20A1Q5TYW2 823 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 ANKRD20A3Q5VUR7 823 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 EGFLAMQ63HQ2 1017 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 MMGT1Q8N4V1 131 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 OR2AP1Q8NGE2 309 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 USP33Q8TEY7 942 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 SORCS1Q8WY21 1168 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 MYO19Q96H55 970 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 LRIG1Q96JA1 1093 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 AGAP3Q96P47 875 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 KRT12Q99456 494 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 GABRG3Q99928 467 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 GBA3Q9H227 469 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 TBC1D17Q9HA65 648 aa17.23■□□□□ 0.35
SCAMP4-211ENST00000588907 ALOX15BO15296 676 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 SYNCRIPO60506 623 aaKnown RBP17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 HLA-DQB2P05538 268 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 CHRNB1P11230 501 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 CA4P22748 312 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 KCNJ1P48048 391 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 PRPSAP1Q14558 356 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 ELAVL3Q14576 367 aaKnown RBP17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 C8orf74Q6P047 294 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 LEKR1Q6ZMV7 388 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 PID1Q7Z2X4 250 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 DSG4Q86SJ6 1040 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 ZNF567Q8N184 647 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 ZNF687Q8N1G0 1237 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 FRS2Q8WU20 508 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 EZH1Q92800 747 aaPredicted RBP17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 NUDCD1Q96RS6 583 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 TUBGCP5Q96RT8 1024 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 CARD6Q9BX69 1037 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 SLC25A51Q9H1U9 297 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 MFSD1Q9H3U5 465 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 NT5MQ9NPB1 228 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 VPS45Q9NRW7 570 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 RSPH14Q9UHP6 348 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 SLCO3A1Q9UIG8 710 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 AAR2Q9Y312 384 aaKnown RBP17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 FCF1Q9Y324 198 aaKnown RBP17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 TTLL3Q9Y4R7 772 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 STON1Q9Y6Q2 735 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 NCOR1O75376 2440 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 VCANP13611 3396 aa17.22■□□□□ 0.35
SCAMP4-211ENST00000588907 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 FAM170BA6NMN3 283 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 CHURC1-FNTBB4DL54 471 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 RNF40O75150 1001 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 ANXA9O76027 345 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 CD72P21854 359 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 TARSP26639 723 aaKnown RBP17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 TIE1P35590 1138 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 FDFT1P37268 417 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 IL12RB1P42701 662 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 RPS9P46781 194 aaKnown RBP17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 NUMBP49757 651 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 GDF10P55107 478 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 SEC13P55735 322 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 ITKQ08881 620 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 PTK6Q13882 451 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 PARP6Q2NL67 630 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 CARD16Q5EG05 197 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 SFTPA1Q8IWL2 248 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 TSEN2Q8NCE0 465 aaKnown RBP17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 PJA1Q8NG27 643 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 LRRN4Q8WUT4 740 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 FCRL5Q96RD9 977 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 RAB17Q9H0T7 212 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 GLOD4Q9HC38 313 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 SCUBE2Q9NQ36 999 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 LHX3Q9UBR4 397 aa17.21■□□□□ 0.35
SCAMP4-211ENST00000588907 A0A1W2PQ67 120 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 ERI2A8K979 691 aaKnown RBP17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 TTC34A8MYJ7 566 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 WASH3PC4AMC7 463 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms