RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 CERS2Q96G23 380 aa16.78■□□□□ 0.28
NFIX-210ENST00000588228 SAMD11Q96NU1 681 aa16.78■□□□□ 0.28
NFIX-210ENST00000588228 FCRL3Q96P31 734 aaPredicted RBP16.78■□□□□ 0.28
NFIX-210ENST00000588228 KIFC1Q9BW19 673 aa16.78■□□□□ 0.28
NFIX-210ENST00000588228 ACE2Q9BYF1 805 aaPredicted RBP16.78■□□□□ 0.28
NFIX-210ENST00000588228 POLR1EQ9GZS1 481 aaKnown RBP16.78■□□□□ 0.28
NFIX-210ENST00000588228 ARNT2Q9HBZ2 717 aa16.78■□□□□ 0.28
NFIX-210ENST00000588228 MAN1C1Q9NR34 630 aa16.78■□□□□ 0.28
NFIX-210ENST00000588228 SHROOM3Q8TF72 1996 aa16.78■□□□□ 0.28
NFIX-210ENST00000588228 ZCWPW2A0A1B0GU75 182 aa16.78■□□□□ 0.28
NFIX-210ENST00000588228 SPAG7O75391 227 aa16.78■□□□□ 0.28
NFIX-210ENST00000588228 MMP2P08253 660 aa16.78■□□□□ 0.28
NFIX-210ENST00000588228 DDX6P26196 483 aaKnown RBP eCLIP16.78■□□□□ 0.28
NFIX-210ENST00000588228 IRS1P35568 1242 aa16.78■□□□□ 0.28
NFIX-210ENST00000588228 CD86P42081 329 aa16.78■□□□□ 0.28
NFIX-210ENST00000588228 SEC24CP53992 1094 aa16.78■□□□□ 0.28
NFIX-210ENST00000588228 PDE12Q6L8Q7 609 aaKnown RBP16.78■□□□□ 0.28
NFIX-210ENST00000588228 CES3Q6UWW8 571 aa16.78■□□□□ 0.28
NFIX-210ENST00000588228 SPRED2Q7Z698 418 aa16.78■□□□□ 0.28
NFIX-210ENST00000588228 UNC5BQ8IZJ1 945 aa16.78■□□□□ 0.28
NFIX-210ENST00000588228 DYDC1Q8WWB3 177 aa16.78■□□□□ 0.28
NFIX-210ENST00000588228 SPON2Q9BUD6 331 aa16.78■□□□□ 0.28
NFIX-210ENST00000588228 ATP13A1Q9HD20 1204 aa16.78■□□□□ 0.28
NFIX-210ENST00000588228 UBA2Q9UBT2 640 aaPredicted RBP16.78■□□□□ 0.28
NFIX-210ENST00000588228 SEPT3Q9UH03 358 aa16.78■□□□□ 0.28
NFIX-210ENST00000588228 SH3BP1Q9Y3L3 701 aa16.78■□□□□ 0.28
NFIX-210ENST00000588228 ANAPC1Q9H1A4 1944 aa16.77■□□□□ 0.28
NFIX-210ENST00000588228 UGT1A9O60656 530 aa16.77■□□□□ 0.28
NFIX-210ENST00000588228 TBL1XO60907 577 aa16.77■□□□□ 0.28
NFIX-210ENST00000588228 CLASP2O75122 1294 aaKnown RBP16.77■□□□□ 0.28
NFIX-210ENST00000588228 GJA1P17302 382 aa16.77■□□□□ 0.28
NFIX-210ENST00000588228 PTPN2P17706 415 aa16.77■□□□□ 0.28
NFIX-210ENST00000588228 LRRC14Q15048 493 aa16.77■□□□□ 0.28
NFIX-210ENST00000588228 ALG1LQ6GMV1 187 aa16.77■□□□□ 0.28
NFIX-210ENST00000588228 PKN3Q6P5Z2 889 aa16.77■□□□□ 0.28
NFIX-210ENST00000588228 RASSF3Q86WH2 238 aa16.77■□□□□ 0.28
NFIX-210ENST00000588228 CPXM2Q8N436 756 aa16.77■□□□□ 0.28
NFIX-210ENST00000588228 LEMD2Q8NC56 503 aa16.77■□□□□ 0.28
NFIX-210ENST00000588228 DENND1AQ8TEH3 1009 aa16.77■□□□□ 0.28
NFIX-210ENST00000588228 MFSD3Q96ES6 412 aa16.77■□□□□ 0.28
NFIX-210ENST00000588228 TMA16Q96EY4 203 aaKnown RBP16.77■□□□□ 0.28
NFIX-210ENST00000588228 SLC46A2Q9BY10 475 aa16.77■□□□□ 0.28
NFIX-210ENST00000588228 UGT1A7Q9HAW7 530 aa16.77■□□□□ 0.28
NFIX-210ENST00000588228 UGT1A10Q9HAW8 530 aa16.77■□□□□ 0.28
NFIX-210ENST00000588228 UGT1A8Q9HAW9 530 aa16.77■□□□□ 0.28
NFIX-210ENST00000588228 MRM3Q9HC36 420 aaKnown RBP16.77■□□□□ 0.28
NFIX-210ENST00000588228 CHRAC1Q9NRG0 131 aa16.77■□□□□ 0.28
NFIX-210ENST00000588228 HCFC1R1Q9NWW0 138 aa16.77■□□□□ 0.28
NFIX-210ENST00000588228 ZFATQ9P243 1243 aa16.77■□□□□ 0.28
NFIX-210ENST00000588228 CFAP97Q9P2B7 532 aa16.77■□□□□ 0.28
NFIX-210ENST00000588228 MYO18AQ92614 2054 aaKnown RBP16.77■□□□□ 0.27
NFIX-210ENST00000588228 TRIM49D1C9J1S8 452 aa16.76■□□□□ 0.27
NFIX-210ENST00000588228 H0Y626 953 aa16.76■□□□□ 0.27
NFIX-210ENST00000588228 NRG2O14511 850 aaPredicted RBP16.76■□□□□ 0.27
NFIX-210ENST00000588228 RFPL2O75678 378 aa16.76■□□□□ 0.27
NFIX-210ENST00000588228 ZWINTO95229 277 aa16.76■□□□□ 0.27
NFIX-210ENST00000588228 LUC7L3O95232 432 aaKnown RBP16.76■□□□□ 0.27
NFIX-210ENST00000588228 FAM107AO95990 144 aa16.76■□□□□ 0.27
NFIX-210ENST00000588228 HNRNPA1P09651 372 aaKnown RBP eCLIP16.76■□□□□ 0.27
NFIX-210ENST00000588228 CA4P22748 312 aa16.76■□□□□ 0.27
NFIX-210ENST00000588228 CCR2P41597 374 aa16.76■□□□□ 0.27
NFIX-210ENST00000588228 SLC18A2Q05940 514 aa16.76■□□□□ 0.27
NFIX-210ENST00000588228 PCSK7Q16549 785 aa16.76■□□□□ 0.27
NFIX-210ENST00000588228 C9orf50Q5SZB4 431 aa16.76■□□□□ 0.27
NFIX-210ENST00000588228 STXBP5Q5T5C0 1151 aa16.76■□□□□ 0.27
NFIX-210ENST00000588228 RNF219Q5W0B1 726 aaPredicted RBP16.76■□□□□ 0.27
NFIX-210ENST00000588228 PACS1Q6VY07 963 aa16.76■□□□□ 0.27
NFIX-210ENST00000588228 BANPQ8N9N5 519 aa16.76■□□□□ 0.27
NFIX-210ENST00000588228 PPHLN1Q8NEY8 458 aaKnown RBP16.76■□□□□ 0.27
NFIX-210ENST00000588228 SHKBP1Q8TBC3 707 aa16.76■□□□□ 0.27
NFIX-210ENST00000588228 CHMP6Q96FZ7 201 aa16.76■□□□□ 0.27
NFIX-210ENST00000588228 SERAC1Q96JX3 654 aa16.76■□□□□ 0.27
NFIX-210ENST00000588228 PSKH2Q96QS6 385 aa16.76■□□□□ 0.27
NFIX-210ENST00000588228 TGS1Q96RS0 853 aaKnown RBP16.76■□□□□ 0.27
NFIX-210ENST00000588228 SEMA3CQ99985 751 aa16.76■□□□□ 0.27
NFIX-210ENST00000588228 MGME1Q9BQP7 344 aa16.76■□□□□ 0.27
NFIX-210ENST00000588228 MUC3BQ9H195 1237 aa16.76■□□□□ 0.27
NFIX-210ENST00000588228 ARHGAP26Q9UNA1 814 aa16.76■□□□□ 0.27
NFIX-210ENST00000588228 ERICH4A6NGS2 130 aa16.75■□□□□ 0.27
NFIX-210ENST00000588228 GRXCR1A8MXD5 290 aa16.75■□□□□ 0.27
NFIX-210ENST00000588228 NDUFAB1O14561 156 aa16.75■□□□□ 0.27
NFIX-210ENST00000588228 SCAMP3O14828 347 aaKnown RBP16.75■□□□□ 0.27
NFIX-210ENST00000588228 MUSKO15146 869 aa16.75■□□□□ 0.27
NFIX-210ENST00000588228 CA3P07451 260 aa16.75■□□□□ 0.27
NFIX-210ENST00000588228 ERVK-10P10266 1014 aa16.75■□□□□ 0.27
NFIX-210ENST00000588228 DNAJC3Q13217 504 aa16.75■□□□□ 0.27
NFIX-210ENST00000588228 SLC14A2Q15849 920 aa16.75■□□□□ 0.27
NFIX-210ENST00000588228 SH2D5Q6ZV89 423 aa16.75■□□□□ 0.27
NFIX-210ENST00000588228 CARNMT1Q8N4J0 409 aa16.75■□□□□ 0.27
NFIX-210ENST00000588228 CKAP2Q8WWK9 683 aa16.75■□□□□ 0.27
NFIX-210ENST00000588228 CCT8L2Q96SF2 557 aa16.75■□□□□ 0.27
NFIX-210ENST00000588228 CPNE1Q99829 537 aa16.75■□□□□ 0.27
NFIX-210ENST00000588228 CINPQ9BW66 212 aaPredicted RBP16.75■□□□□ 0.27
NFIX-210ENST00000588228 RABEP2Q9H5N1 569 aa16.75■□□□□ 0.27
NFIX-210ENST00000588228 DNMT3BQ9UBC3 853 aaKnown RBP16.75■□□□□ 0.27
NFIX-210ENST00000588228 PRKAG3Q9UGI9 489 aa16.75■□□□□ 0.27
NFIX-210ENST00000588228 DPP7Q9UHL4 492 aa16.75■□□□□ 0.27
NFIX-210ENST00000588228 TCAF1Q9Y4C2 921 aa16.75■□□□□ 0.27
NFIX-210ENST00000588228 LOC285095A0A1B0GVY8 99 aa16.75■□□□□ 0.27
NFIX-210ENST00000588228 SOBPA7XYQ1 873 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms