RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 LHX3Q9UBR4 397 aa19.48■□□□□ 0.71
DDX39A-204ENST00000586558 AMACRQ9UHK6 382 aa19.48■□□□□ 0.71
DDX39A-204ENST00000586558 NYNRINQ9P2P1 1898 aaKnown RBP19.48■□□□□ 0.71
DDX39A-204ENST00000586558 BNIP3LO60238 219 aa19.47■□□□□ 0.71
DDX39A-204ENST00000586558 ZNF217O75362 1048 aa19.47■□□□□ 0.71
DDX39A-204ENST00000586558 PRNPP04156 253 aa19.47■□□□□ 0.71
DDX39A-204ENST00000586558 PECAM1P16284 738 aaPredicted RBP19.47■□□□□ 0.71
DDX39A-204ENST00000586558 PXNP49023 591 aaPredicted RBP19.47■□□□□ 0.71
DDX39A-204ENST00000586558 FNTBP49356 437 aa19.47■□□□□ 0.71
DDX39A-204ENST00000586558 CCNHP51946 323 aaPredicted RBP19.47■□□□□ 0.71
DDX39A-204ENST00000586558 PTPN5P54829 565 aa19.47■□□□□ 0.71
DDX39A-204ENST00000586558 RPS14P62263 151 aaKnown RBP19.47■□□□□ 0.71
DDX39A-204ENST00000586558 BYSLQ13895 437 aaKnown RBP19.47■□□□□ 0.71
DDX39A-204ENST00000586558 ZNF235Q14590 738 aa19.47■□□□□ 0.71
DDX39A-204ENST00000586558 CST6Q15828 149 aa19.47■□□□□ 0.71
DDX39A-204ENST00000586558 MARC1Q5VT66 337 aa19.47■□□□□ 0.71
DDX39A-204ENST00000586558 FAM46CQ5VWP2 391 aa19.47■□□□□ 0.71
DDX39A-204ENST00000586558 HEATR6Q6AI08 1181 aaKnown RBP19.47■□□□□ 0.71
DDX39A-204ENST00000586558 AADACL2Q6P093 401 aa19.47■□□□□ 0.71
DDX39A-204ENST00000586558 KIAA1324Q6UXG2 1013 aaKnown RBP19.47■□□□□ 0.71
DDX39A-204ENST00000586558 DPY19L3Q6ZPD9 716 aa19.47■□□□□ 0.71
DDX39A-204ENST00000586558 CCDC13Q8IYE1 715 aa19.47■□□□□ 0.71
DDX39A-204ENST00000586558 TTC13Q8NBP0 860 aa19.47■□□□□ 0.71
DDX39A-204ENST00000586558 ZBTB44Q8NCP5 570 aa19.47■□□□□ 0.71
DDX39A-204ENST00000586558 PRSS33Q8NF86 280 aa19.47■□□□□ 0.71
DDX39A-204ENST00000586558 ERLEC1Q96DZ1 483 aa19.47■□□□□ 0.71
DDX39A-204ENST00000586558 LRIG1Q96JA1 1093 aa19.47■□□□□ 0.71
DDX39A-204ENST00000586558 LGMNQ99538 433 aa19.47■□□□□ 0.71
DDX39A-204ENST00000586558 HERPUD2Q9BSE4 406 aa19.47■□□□□ 0.71
DDX39A-204ENST00000586558 TM6SF2Q9BZW4 377 aa19.47■□□□□ 0.71
DDX39A-204ENST00000586558 NUP205Q92621 2012 aa19.46■□□□□ 0.71
DDX39A-204ENST00000586558 CACNA1HO95180 2353 aa19.46■□□□□ 0.71
DDX39A-204ENST00000586558 HACD1B0YJ81 288 aa19.46■□□□□ 0.71
DDX39A-204ENST00000586558 C1QTNF3-AMACRE9PGA6 284 aa19.46■□□□□ 0.71
DDX39A-204ENST00000586558 MTSS1O43312 755 aa19.46■□□□□ 0.71
DDX39A-204ENST00000586558 ZNF189O75820 626 aaPredicted RBP19.46■□□□□ 0.71
DDX39A-204ENST00000586558 POP4O95707 220 aaKnown RBP19.46■□□□□ 0.71
DDX39A-204ENST00000586558 DNTTP04053 509 aa19.46■□□□□ 0.71
DDX39A-204ENST00000586558 ACADMP11310 421 aa19.46■□□□□ 0.71
DDX39A-204ENST00000586558 CHRNA3P32297 505 aa19.46■□□□□ 0.71
DDX39A-204ENST00000586558 CNR2P34972 360 aa19.46■□□□□ 0.71
DDX39A-204ENST00000586558 MAPK8P45983 427 aa19.46■□□□□ 0.71
DDX39A-204ENST00000586558 CSNK1DP48730 415 aa19.46■□□□□ 0.71
DDX39A-204ENST00000586558 RAD51Q06609 339 aa19.46■□□□□ 0.71
DDX39A-204ENST00000586558 NSUN2Q08J23 767 aaKnown RBP eCLIP19.46■□□□□ 0.71
DDX39A-204ENST00000586558 DMWDQ09019 674 aa19.46■□□□□ 0.71
DDX39A-204ENST00000586558 SLC10A7Q0GE19 358 aa19.46■□□□□ 0.71
DDX39A-204ENST00000586558 KLF1Q13351 362 aaPredicted RBP19.46■□□□□ 0.71
DDX39A-204ENST00000586558 XRCC4Q13426 336 aa19.46■□□□□ 0.71
DDX39A-204ENST00000586558 PRKD1Q15139 912 aaPredicted RBP19.46■□□□□ 0.71
DDX39A-204ENST00000586558 NOMO1Q15155 1222 aa19.46■□□□□ 0.71
DDX39A-204ENST00000586558 TTC31Q49AM3 519 aaPredicted RBP19.46■□□□□ 0.71
DDX39A-204ENST00000586558 USP39Q53GS9 565 aaKnown RBP19.46■□□□□ 0.71
DDX39A-204ENST00000586558 ZC3H14Q6PJT7 736 aaKnown RBP19.46■□□□□ 0.71
DDX39A-204ENST00000586558 TEX26Q8N6G2 289 aa19.46■□□□□ 0.71
DDX39A-204ENST00000586558 TMIEQ8NEW7 156 aa19.46■□□□□ 0.71
DDX39A-204ENST00000586558 TRIM44Q96DX7 344 aaPredicted RBP19.46■□□□□ 0.71
DDX39A-204ENST00000586558 HEPHQ9BQS7 1158 aa19.46■□□□□ 0.71
DDX39A-204ENST00000586558 SAE1Q9UBE0 346 aaPredicted RBP19.46■□□□□ 0.71
DDX39A-204ENST00000586558 HECAQ9UBI9 543 aaPredicted RBP19.46■□□□□ 0.71
DDX39A-204ENST00000586558 IL36AQ9UHA7 158 aa19.46■□□□□ 0.71
DDX39A-204ENST00000586558 PPM1HQ9ULR3 514 aa19.46■□□□□ 0.71
DDX39A-204ENST00000586558 IL1BP01584 269 aa19.45■□□□□ 0.7
DDX39A-204ENST00000586558 CCNB1P14635 433 aa19.45■□□□□ 0.7
DDX39A-204ENST00000586558 C5AR1P21730 350 aa19.45■□□□□ 0.7
DDX39A-204ENST00000586558 MMP13P45452 471 aa19.45■□□□□ 0.7
DDX39A-204ENST00000586558 GNG11P61952 73 aa19.45■□□□□ 0.7
DDX39A-204ENST00000586558 IFI35P80217 286 aaPredicted RBP19.45■□□□□ 0.7
DDX39A-204ENST00000586558 TCF15Q12870 199 aa19.45■□□□□ 0.7
DDX39A-204ENST00000586558 GRM3Q14832 879 aa19.45■□□□□ 0.7
DDX39A-204ENST00000586558 MYLK3Q32MK0 819 aa19.45■□□□□ 0.7
DDX39A-204ENST00000586558 MMAAQ8IVH4 418 aaKnown RBP19.45■□□□□ 0.7
DDX39A-204ENST00000586558 TSEN2Q8NCE0 465 aaKnown RBP19.45■□□□□ 0.7
DDX39A-204ENST00000586558 ACTL9Q8TC94 416 aa19.45■□□□□ 0.7
DDX39A-204ENST00000586558 TFB1MQ8WVM0 346 aaKnown RBP19.45■□□□□ 0.7
DDX39A-204ENST00000586558 HAUS1Q96CS2 278 aa19.45■□□□□ 0.7
DDX39A-204ENST00000586558 SPACA7Q96KW9 195 aa19.45■□□□□ 0.7
DDX39A-204ENST00000586558 QKIQ96PU8 341 aaKnown RBP eCLIP19.45■□□□□ 0.7
DDX39A-204ENST00000586558 TPSD1Q9BZJ3 242 aa19.45■□□□□ 0.7
DDX39A-204ENST00000586558 SLC6A17Q9H1V8 727 aa19.45■□□□□ 0.7
DDX39A-204ENST00000586558 PABPC3Q9H361 631 aaKnown RBP19.45■□□□□ 0.7
DDX39A-204ENST00000586558 USP36Q9P275 1121 aaKnown RBP19.45■□□□□ 0.7
DDX39A-204ENST00000586558 MUC6Q6W4X9 2439 aa19.45■□□□□ 0.7
DDX39A-204ENST00000586558 H0Y858 1186 aa19.44■□□□□ 0.7
DDX39A-204ENST00000586558 ENC1O14682 589 aa19.44■□□□□ 0.7
DDX39A-204ENST00000586558 NEBLO76041 1014 aa19.44■□□□□ 0.7
DDX39A-204ENST00000586558 IGLV3-19P01714 112 aa19.44■□□□□ 0.7
DDX39A-204ENST00000586558 SLC8A1P32418 973 aa19.44■□□□□ 0.7
DDX39A-204ENST00000586558 P2RY2P41231 377 aa19.44■□□□□ 0.7
DDX39A-204ENST00000586558 PSMD8P48556 350 aa19.44■□□□□ 0.7
DDX39A-204ENST00000586558 AP1S1P61966 158 aa19.44■□□□□ 0.7
DDX39A-204ENST00000586558 OTUD4Q01804 1114 aaKnown RBP19.44■□□□□ 0.7
DDX39A-204ENST00000586558 AP1B1Q10567 949 aa19.44■□□□□ 0.7
DDX39A-204ENST00000586558 SLC45A4Q5BKX6 768 aa19.44■□□□□ 0.7
DDX39A-204ENST00000586558 RALGPS1Q5JS13 557 aa19.44■□□□□ 0.7
DDX39A-204ENST00000586558 ATXN7L2Q5T6C5 722 aaPredicted RBP19.44■□□□□ 0.7
DDX39A-204ENST00000586558 USP30Q70CQ3 517 aa19.44■□□□□ 0.7
DDX39A-204ENST00000586558 C11orf74Q86VG3 221 aa19.44■□□□□ 0.7
DDX39A-204ENST00000586558 SLC13A5Q86YT5 568 aaPredicted RBP19.44■□□□□ 0.7
DDX39A-204ENST00000586558 RYBPQ8N488 228 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms