RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 PPCSQ9HAB8 311 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 USP29Q9HBJ7 922 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 LTB4R2Q9NPC1 389 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 ANAPC5Q9UJX4 755 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 NFU1Q9UMS0 254 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 PRR23AA6NEV1 266 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 ZSCAN5CA6NGD5 496 aaPredicted RBP12.88□□□□□ -0.35
VMP1-202ENST00000585847 K7EQS6 105 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 RAMP2O60895 175 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 CHRNB1P11230 501 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 TPSB2P20231 275 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 IVDP26440 423 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 ECHS1P30084 290 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 CSKP41240 450 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 NBL1P41271 181 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 DGKGP49619 791 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 EIF3BP55884 814 aaKnown RBP12.88□□□□□ -0.35
VMP1-202ENST00000585847 IFI35P80217 286 aaPredicted RBP12.88□□□□□ -0.35
VMP1-202ENST00000585847 KDSRQ06136 332 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 GPS1Q13098 491 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 CCINQ13939 588 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 TPSAB1Q15661 275 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 FUT11Q495W5 492 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 IZUMO3Q5VZ72 239 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 ADIPOR2Q86V24 386 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 ZC3H18Q86VM9 953 aaKnown RBP12.88□□□□□ -0.35
VMP1-202ENST00000585847 MFN1Q8IWA4 741 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 CCDC13Q8IYE1 715 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 BBS5Q8N3I7 341 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 NPWQ8N729 165 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 FAM71DQ8N9W8 422 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 TERB1Q8NA31 727 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 MCUQ8NE86 351 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 LRRC39Q96DD0 335 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 FOXQ1Q9C009 403 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 MAGEH1Q9H213 219 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 DPH5Q9H2P9 285 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 TBC1D17Q9HA65 648 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 XAB2Q9HCS7 855 aaKnown RBP12.88□□□□□ -0.35
VMP1-202ENST00000585847 ABCB8Q9NUT2 735 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 FBXL21Q9UKT6 434 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 SNX24Q9Y343 169 aa12.88□□□□□ -0.35
VMP1-202ENST00000585847 A0A0D9SEW6 157 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 KANSL1LA0AUZ9 987 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 ESYT3A0FGR9 886 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 ILVBLA1L0T0 632 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 H0Y626 953 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 MAN2B1O00754 1011 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 SPAG6O75602 509 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 KAT7O95251 611 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 PABPC1P11940 636 aaKnown RBP12.87□□□□□ -0.35
VMP1-202ENST00000585847 MLNP12872 115 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 RBL1P28749 1068 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 NUMBP49757 651 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 RENBPP51606 427 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 CLCN5P51795 746 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 PLK1P53350 603 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 PLTPP55058 493 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 GEMIN4P57678 1058 aaKnown RBP12.87□□□□□ -0.35
VMP1-202ENST00000585847 SEMA5AQ13591 1074 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 HNRNPDQ14103 355 aaKnown RBP12.87□□□□□ -0.35
VMP1-202ENST00000585847 RFTN1Q14699 578 aaPredicted RBP12.87□□□□□ -0.35
VMP1-202ENST00000585847 LLGL1Q15334 1064 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 PARP6Q2NL67 630 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 EMC10Q5UCC4 262 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 GRAMD4Q6IC98 578 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 ZDHHC24Q6UX98 284 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 ZNF852Q6ZMS4 543 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 CENPUQ71F23 418 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 TMC3Q7Z5M5 1100 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 ARHGAP12Q8IWW6 846 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 PDIK1LQ8N165 341 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 NETO2Q8NC67 525 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 CCNYQ8ND76 341 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 OR7D4Q8NG98 312 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 FBXO25Q8TCJ0 367 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 DEC1Q9P2X7 70 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 GGA2Q9UJY4 613 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 NDRG2Q9UN36 371 aaKnown RBP12.87□□□□□ -0.35
VMP1-202ENST00000585847 FARP1Q9Y4F1 1045 aaPredicted RBP12.87□□□□□ -0.35
VMP1-202ENST00000585847 SPTBN4Q9H254 2564 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 MYO15AQ9UKN7 3530 aa12.87□□□□□ -0.35
VMP1-202ENST00000585847 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.86□□□□□ -0.35
VMP1-202ENST00000585847 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.86□□□□□ -0.35
VMP1-202ENST00000585847 RNF103O00237 685 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 MATN3O15232 486 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 RPL22P35268 128 aaKnown RBP12.86□□□□□ -0.35
VMP1-202ENST00000585847 ACVRL1P37023 503 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 GRIA2P42262 883 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 KIR2DL1P43626 348 aaPredicted RBP12.86□□□□□ -0.35
VMP1-202ENST00000585847 TNNT3P45378 269 aaPredicted RBP12.86□□□□□ -0.35
VMP1-202ENST00000585847 ARL4CP56559 192 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 IL10RBQ08334 325 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 ZNF177Q13360 481 aaPredicted RBP12.86□□□□□ -0.35
VMP1-202ENST00000585847 SLC12A1Q13621 1099 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 GAS6Q14393 721 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 PRPSAP1Q14558 356 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 CASP8Q14790 479 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 SLC14A2Q15849 920 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 DNAJC21Q5F1R6 531 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms