RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 ACRP10323 421 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 MYL4P12829 197 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 ENO3P13929 434 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 TCN1P20061 433 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 ACVRL1P37023 503 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 AIF1P55008 147 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 MCCD1P59942 119 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 ART3Q13508 389 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 DPYSQ14117 519 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 FBXL22Q6P050 247 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 LAYNQ6UX15 382 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 OTOP2Q7RTS6 562 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 RAB44Q7Z6P3 723 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 CNPY4Q8N129 248 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 FBXO22Q8NEZ5 403 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 ERLEC1Q96DZ1 483 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 GCNAQ96QF7 691 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 BPIFA1Q9NP55 256 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 TK2O00142 265 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 DCXO43602 365 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 TRIM13O60858 407 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 RHOBTB1O94844 696 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 ITGB6P18564 788 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 TSNAXIP1Q2TAA8 658 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 FBXO48Q5FWF7 155 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 HECTD3Q5T447 861 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 MAP3K21Q5TCX8 1036 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 KIRREL3Q8IZU9 778 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 RTL3Q8N8U3 475 aaKnown RBP12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 SPPL2BQ8TCT7 592 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 RTP3Q9BQQ7 232 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 MRPL9Q9BYD2 267 aaKnown RBP12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 GPR63Q9BZJ6 419 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 ILKAPQ9H0C8 392 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 CCDC134Q9H6E4 229 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 FAM50BQ9Y247 325 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 CEP290O15078 2479 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 FAM159BA6NKW6 160 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 OR6C75A6NL08 312 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 STX7O15400 261 aaKnown RBP12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 PIGNO95427 931 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 MLLT6P55198 1093 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 NME5P56597 212 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 PTPRCAPQ14761 206 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 PRKD1Q15139 912 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 KIF19Q2TAC6 998 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 USP41Q3LFD5 358 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 RTP2Q5QGT7 225 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 KYAT3Q6YP21 454 aaKnown RBP12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 MRPL10Q7Z7H8 261 aaKnown RBP12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 SCD5Q86SK9 330 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 RTN4RL1Q86UN2 441 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 DDIASQ8IXT1 998 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 TEX9Q8N6V9 391 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 TDRD5Q8NAT2 981 aaKnown RBP12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 DENND1AQ8TEH3 1009 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 ACE2Q9BYF1 805 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 AFF4Q9UHB7 1163 aaKnown RBP12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 SH3BP1Q9Y3L3 701 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 DNAJC8O75937 253 aaPredicted RBP12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 CHRM3P20309 590 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 MAP2K2P36507 400 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 TUFMP49411 452 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 SMAD3P84022 425 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 XKR4Q5GH76 650 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 RABGAP1LQ5R372 815 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 SLC26A7Q8TE54 656 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 EBF4Q9BQW3 602 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 MLPHQ9BV36 600 aaPredicted RBP12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 DNMT3LQ9UJW3 386 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 MATN3O15232 486 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 ITM2AO43736 263 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 B4GALT3O60512 393 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 ENTPD5O75356 428 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 RFPL1O75677 317 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 BNIP1Q12981 228 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 FAM83EQ2M2I3 478 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 PKN3Q6P5Z2 889 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 CLNKQ7Z7G1 428 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 NPAS4Q8IUM7 802 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 SPNS2Q8IVW8 549 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 RNF148Q8N7C7 305 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 SLAIN1Q8ND83 568 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 PIWIL2Q8TC59 973 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 CALML6Q8TD86 181 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 BTN2A3PQ96KV6 586 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 OLA1Q9NTK5 396 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 XPR1Q9UBH6 696 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 PLIN3O60664 434 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 PDHA1P08559 390 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 HAPLN1P10915 354 aaPredicted RBP12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 PTPN4P29074 926 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 GALNT2Q10471 571 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 CNTD1Q8N815 330 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 AGAP11Q8TF27 550 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 TMA16Q96EY4 203 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 UBE2OQ9C0C9 1292 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 SCUBE2Q9NQ36 999 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 RGS18Q9NS28 235 aa12.61□□□□□ -0.39
SMARCA4-208ENST00000585799 HEATR9A2RTY3 570 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms