RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 ZNF599Q96NL3 588 aa14.11□□□□□ -0.15
TRAF4-215ENST00000584944 TM6SF2Q9BZW4 377 aa14.11□□□□□ -0.15
TRAF4-215ENST00000584944 TNKS2Q9H2K2 1166 aa14.11□□□□□ -0.15
TRAF4-215ENST00000584944 NOL6Q9H6R4 1146 aaKnown RBP14.11□□□□□ -0.15
TRAF4-215ENST00000584944 PARD6AQ9NPB6 346 aa14.11□□□□□ -0.15
TRAF4-215ENST00000584944 PRSS16Q9NQE7 514 aa14.11□□□□□ -0.15
TRAF4-215ENST00000584944 SEPT3Q9UH03 358 aa14.11□□□□□ -0.15
TRAF4-215ENST00000584944 NCKAP1Q9Y2A7 1128 aa14.11□□□□□ -0.15
TRAF4-215ENST00000584944 EFR3BQ9Y2G0 817 aa14.11□□□□□ -0.15
TRAF4-215ENST00000584944 FCF1Q9Y324 198 aaKnown RBP14.11□□□□□ -0.15
TRAF4-215ENST00000584944 MFHAS1Q9Y4C4 1052 aa14.11□□□□□ -0.15
TRAF4-215ENST00000584944 TPRP12270 2363 aaKnown RBP14.1□□□□□ -0.15
TRAF4-215ENST00000584944 PRR5-ARHGAP8B1AHC4 643 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 H7C0C1 242 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 J3KR12 359 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 KRIT1O00522 736 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 MCF2LO15068 1137 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 AXIN1O15169 862 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 ZMPSTE24O75844 475 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 PAPSS2O95340 614 aaPredicted RBP14.1□□□□□ -0.15
TRAF4-215ENST00000584944 PRNPP04156 253 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 MMP13P45452 471 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 ATP5OP48047 213 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 PXNP49023 591 aaPredicted RBP14.1□□□□□ -0.15
TRAF4-215ENST00000584944 PEX5P50542 639 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 ARHGAP8P85298 464 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 LMNB2Q03252 620 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 GALNT2Q10471 571 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 CAMK2GQ13555 558 aaPredicted RBP14.1□□□□□ -0.15
TRAF4-215ENST00000584944 ENPP2Q13822 863 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 LBRQ14739 615 aaKnown RBP14.1□□□□□ -0.15
TRAF4-215ENST00000584944 CARD16Q5EG05 197 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 KIAA1211LQ6NV74 962 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 TMEM92Q6UXU6 159 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 BBS12Q6ZW61 710 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 TMPRSS6Q8IU80 811 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 ARHGAP12Q8IWW6 846 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 TTC13Q8NBP0 860 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 TFB1MQ8WVM0 346 aaKnown RBP14.1□□□□□ -0.15
TRAF4-215ENST00000584944 ISG20Q96AZ6 181 aaKnown RBP14.1□□□□□ -0.15
TRAF4-215ENST00000584944 PPP1R16AQ96I34 528 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 OMDQ99983 421 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 ZDHHC6Q9H6R6 413 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 POLR3BQ9NW08 1133 aaPredicted RBP14.1□□□□□ -0.15
TRAF4-215ENST00000584944 DTLQ9NZJ0 730 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 GMEB2Q9UKD1 530 aa14.1□□□□□ -0.15
TRAF4-215ENST00000584944 A0A1W2PQF6 199 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 ANTXRLA6NF34 631 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 APOC4-APOC2K7ER74 178 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 K7ESF4 209 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 ALOX15BO15296 676 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 DDX3YO15523 660 aaKnown RBP14.09□□□□□ -0.15
TRAF4-215ENST00000584944 MTSS1O43312 755 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 SMAD6O43541 496 aaKnown RBP14.09□□□□□ -0.15
TRAF4-215ENST00000584944 CEP104O60308 925 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 ZNF217O75362 1048 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 ZNF189O75820 626 aaPredicted RBP14.09□□□□□ -0.15
TRAF4-215ENST00000584944 ADH1BP00325 375 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 APOC2P02655 101 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 CCNCP24863 283 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 PTPN7P35236 360 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 HSPA9P38646 679 aaKnown RBP14.09□□□□□ -0.15
TRAF4-215ENST00000584944 PSMD8P48556 350 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 ZBTB16Q05516 673 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 LPAL2Q16609 132 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 HS1BP3Q53T59 392 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 ARTNQ5T4W7 220 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 LAIR1Q6GTX8 287 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 CEP68Q76N32 757 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 ZC3H18Q86VM9 953 aaKnown RBP14.09□□□□□ -0.15
TRAF4-215ENST00000584944 LONP2Q86WA8 852 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 MMAAQ8IVH4 418 aaKnown RBP14.09□□□□□ -0.15
TRAF4-215ENST00000584944 CCDC13Q8IYE1 715 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 STK40Q8N2I9 435 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 SLC35F6Q8N357 371 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 OR2AP1Q8NGE2 309 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 GRIN3AQ8TCU5 1115 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 MAIP1Q8WWC4 291 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 NAP1L3Q99457 506 aaPredicted RBP14.09□□□□□ -0.15
TRAF4-215ENST00000584944 TPSD1Q9BZJ3 242 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 KLC2Q9H0B6 622 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 CARD9Q9H257 536 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 MTG2Q9H4K7 406 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 HECAQ9UBI9 543 aaPredicted RBP14.09□□□□□ -0.15
TRAF4-215ENST00000584944 IL36AQ9UHA7 158 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 HCN2Q9UL51 889 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 RAB23Q9ULC3 237 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 SCML1Q9UN30 329 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 DOCK4Q8N1I0 1966 aa14.09□□□□□ -0.15
TRAF4-215ENST00000584944 CTAGE9A4FU28 777 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 USP27XA6NNY8 438 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 KPNA3O00505 521 aaPredicted RBP14.08□□□□□ -0.16
TRAF4-215ENST00000584944 ENC1O14682 589 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 MATN3O15232 486 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 HRO43593 1189 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 MAFKO60675 156 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 NDUFS2O75306 463 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 POP4O95707 220 aaKnown RBP14.08□□□□□ -0.16
TRAF4-215ENST00000584944 GSRP00390 522 aa14.08□□□□□ -0.16
TRAF4-215ENST00000584944 CCNB1P14635 433 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms