RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, human

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAPA-208	ENST00000584796	PDLIM4	P50479	330 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	ERVFC1-1	P60608	527 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	ZP1	P60852	638 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	TLE3	Q04726	772 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	GALNT3	Q14435	633 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	AAK1	Q2M2I8	961 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	ALG10	Q5BKT4	473 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	ALG10B	Q5I7T1	473 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	FNBP1L	Q5T0N5	605 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	C10orf76	Q5T2E6	689 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	DCAF12L2	Q5VW00	463 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	C9orf57	Q5W0N0	161 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	C16orf82	Q7Z2V1	217 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	RASGRP3	Q8IV61	690 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	FOXP4	Q8IVH2	680 aa	Predicted RBP	3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	OR4N4	Q8N0Y3	316 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	SLC25A41	Q8N5S1	370 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	GLIS1	Q8NBF1	620 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	ADAMTS14	Q8WXS8	1223 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	PNRC2	Q9NPJ4	139 aa	Known RBP	3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	TNFSF13B	Q9Y275	285 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	MAN2B2	Q9Y2E5	1009 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	DTX4	Q9Y2E6	619 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	DTNA	Q9Y4J8	743 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	BCL9	O00512	1426 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	USP6	P35125	1406 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	ACE	P12821	1306 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	PXDNL	A1KZ92	1463 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	DLEC1	Q9Y238	1755 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	DICER1	Q9UPY3	1922 aa	Known RBP	3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	POLR3A	O14802	1390 aa	Predicted RBP	3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	GPRASP1	Q5JY77	1395 aa		3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	COL5A3	P25940	1745 aa	Predicted RBP	3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	CPSF1	Q10570	1443 aa	Known RBP	3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	C3orf70	A6NLC5	250 aa	Predicted RBP	3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	SRRM3	A6NNA2	597 aa	Predicted RBP	3.14	□□□□□ -1.91
VAPA-208	ENST00000584796		I6L893	689 aa	Predicted RBP	3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	APOL1	O14791	398 aa		3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	LINC01565	O15544	149 aa		3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	GRID2	O43424	1007 aa		3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	DDN	O94850	711 aa	Predicted RBP	3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	ALDOA	P04075	364 aa	Known RBP	3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	FCGR1A	P12314	374 aa		3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	STT3A	P46977	705 aa		3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	FOXL2	P58012	376 aa		3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	TAS2R50	P59544	299 aa		3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	SEC61A1	P61619	476 aa	Known RBP	3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	DSC1	Q08554	894 aa		3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	DUSP6	Q16828	381 aa		3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	ERAP2	Q6P179	960 aa		3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	C8orf82	Q6P1X6	216 aa	Predicted RBP	3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	TMEM88	Q6PEY1	159 aa		3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	3.14	□□□□□ -1.91	2e-8	■■■□□ 15.2
VAPA-208	ENST00000584796	ARMC9	Q7Z3E5	817 aa		3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	C14orf80	Q86SX3	495 aa		3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	TTC30A	Q86WT1	665 aa		3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	IP6K1	Q92551	441 aa		3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	TSR2	Q969E8	191 aa	Known RBP	3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	TTC17	Q96AE7	1141 aa		3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	TIFA	Q96CG3	184 aa		3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	ZNF419	Q96HQ0	510 aa	Predicted RBP	3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	ADAD1	Q96M93	576 aa	Known RBP	3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	POLR3GL	Q9BT43	218 aa		3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	OSBPL5	Q9H0X9	879 aa	Predicted RBP	3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	CATSPERB	Q9H7T0	1116 aa		3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	HELLS	Q9NRZ9	838 aa		3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	ERRFI1	Q9UJM3	462 aa	Predicted RBP	3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	ADAMTS7	Q9UKP4	1686 aa		3.14	□□□□□ -1.91
VAPA-208	ENST00000584796	ANKRD31	Q8N7Z5	1873 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	LTBP1	Q14766	1721 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	PPIP5K1	Q6PFW1	1433 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	CYP3A7-CYP3A51P	A0A087WV96	503 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	TRBV5-7	A0A0A0MS05	114 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	PNMA6E	A0A0J9YXQ4	647 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	FAM234B	A2RU67	622 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796		M0QYT0	321 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	NTN3	O00634	580 aa	Predicted RBP	3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	PCDH17	O14917	1159 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	NTSR2	O95665	410 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	PRSS2	P07478	247 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	SLC5A1	P13866	664 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	CHRNB2	P17787	502 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	CYP3A7	P24462	503 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	SLC16A2	P36021	539 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	PRIM2	P49643	509 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	ADPRH	P54922	357 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	COASY	Q13057	564 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	KRTAP24-1	Q3LI83	254 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	FAM76B	Q5HYJ3	339 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	SPSB3	Q6PJ21	355 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796		Q6ZSV7	163 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	CAMK1D	Q8IU85	385 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	CLIP4	Q8N3C7	705 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	BICD2	Q8TD16	824 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	MCRS1	Q96EZ8	462 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	ZNF304	Q9HCX3	659 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	RPGRIP1L	Q68CZ1	1315 aa		3.13	□□□□□ -1.91
VAPA-208	ENST00000584796	IGSF1	Q8N6C5	1336 aa		3.13	□□□□□ -1.91

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